Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1902 ATGGCAAATGATGATGTATTTCTGAGTTTTAGAGGAGGAACACGCTACCGATTCACGGATCATCTCTATCATGCTTTGCGGCGAAATGGAATCGACACGTTCAGAGATGACGAGAATCTGAGGGTAGGGGATGAACTGAGACCTGTTCTTATGAACGCAATCGAGAATTGCAAAATGGCAATAGTGGTGCTGTGTGAGAACTACGCATCTTCGACGTGGTGCCTTGATGAGTTGGTCAAGATCGTTGACTGTCACGAAAAGCAAGGGAAGCAGGTTCTGCCAATTATTTACAGAATGAAACCTTCAGATGTGTGGGAACAGAAGGGTTCCTATGAGACAGCCATGGCTAAACATGAGGATAGATATGGAAAAGACTCTGAGAAGGTCAAAGCATGGCGATTAGCTTTGTCCAAAGTAAACACGCTAAAGCTAATAAAATGGCTGCATTGCACGGAGAACACGTATGAACCGGAGTTTATCAAGAATATTGTTAGAGACACTGCTGACAGATTACCGTTGCCTGAACCAATCCAGCATGTAGTTGGACTCGATACTTGCTGTGAACAAGTAAAATCAGTGCTAAATATTGAGTCTAATGAAAATATTTGCATGTTGGGAATTTATGGACCTGGTGGAATAGGCAAAACCACATTGGCCAGATGTCTATTCGACAAGATCAAGCGGCAGTTTGAAGCTTCATGTTTTCTTGGTAATGTCAGAGAAAAATCTGAAAGTCGCGGAAGCTTAGAAAGTCTGCAAAAGACAGTTTTATATGACATGGGTGAGGAGACAATAACTGACCTTGGCAGTGAATTTAAGGGAGGATATGAAATCAAACGGAGGCTTCGCCACAAAAGAGTACTTCTAGTTCTTGATGATGTTAATTCAATAACACAATTGGAATCACTGGCTGGAGGGCATGATTGGTTTGGTTCRGGSAGCAGAATCATTATAACAACAAGGGATACTGATGTGGTAGACAAGCATGTGATGGGTGATGTTGTYACCAAGAAATACAAGATGGAGGAGCTAAATGATGATGATTCCTTGGAACTCTTTTCTTGGCATGCTTTCAACAGGAAGGAGCCTGCAGAGAACTTTAAAAATGTTTCAAGRAATGCAATAAGWTATGCAAAGGGCTTTCCGCTGGCTTTAGAAGTAATAGGCTCCCACTTAGGGGGTTTTACAAGTGTGGATAGCTGGGAAGAGGAACTGCACAAGTATAGAATTGATCCAAGTATTCAAGGAGTACTTGAAATAAGCTACAATAGCTTGTATGAACTTGATCAGAAAACTTTCTTGGACATTGCTTGTTTCTTCAAAGGAGAGAAATGGGATTATGTTAAAAGGGTAYTGAAAGCTTGTGACTTCTATCCAATTGTTCGAGTGTTCATTAGTAAATGTTTAATYACTGTAAATCAGAGTGGTTGCTTGGATATGCATGATCTAGTACAAGACATGGGCAAAGAGATTGTAATGAATGAGTCGCCAACAAACCCGGGTGAACGCAGCAGATTATGGTCTCATAAAGACATTCTTCAAGTACTCAAAGATGACACAGGAAGTAGCTCAATTGAAGGAATAATGCTTCACCCTTCTACACTTGAAGAAGTAAATTATTGGATTAATACTGCCTTTGACAAGATGGAGAAACTCAGAATTCTAATTGTTCGGAATACAGTATTTTCAACAGCACCAAGTCATCTTCCAAATAGTTTACGACTACTAGAGTGGAAAGGGTATCCATCAGAGTCATTCCCACTAGATTTTCATCCCCACAGAATTGTTGATCTCAAGCTACCTCACAGTGCTCTTAAATTGGAAAGGCCATTTCAGGTATTTGAGGATTTGACATTTATCAACCTCTCCCAATGTCAATCCGTTACACACATCCCGGATATGTCTGGAGCTAAAAGCCTGAGAGTCCTCACACTTGACAAATGCAATAAACTGGTAGGATTTGATGAATCCATTGGATTTATGCCAAACCTTGTATATTTGAGTGCTTCGCAATGCAGTAAGCTCAAACATTTTGTACCAGAAATGTATTTGCCGTCTCTTGAAGTGCTTTCATTTTACTTTTGTAAAAGTCTCCAAAGCTTTCCAGAAATCATGCAAGAGATGGACAAACCATTAAAGATTAACTTGGTAAATTCTGCAATCGAGGAGTTCCCAAATTCCATTGGTAATCTTACAGGGCTCGAGCATATAGACATCTCTAAATCCAAAAGACTCCGGTACCTACCAGGTAGCTTCTTGATGTTGCCCAAACTTTTCACATTGACAATAGATGGATGTTCTCTGCTTGGAAGATCATTTAAAAGGTTCAAAGGACACAGCAGTCCAAATATAAGGAGACTGAATTTCAGTGGTGCTAATCTTTCAGATGAAGATCTTCATCCAATTCTTCATGTTCATCAGAAGTTGGAAGGCATCAATGTATCAAATAATTGTTTTTCATCCCTCCCAAAATGCATTGAAGGATTTTTGCACTTGAAAATTCTTGACGTGAGTTATTGTAATAATCTTATGATAATTCCAGAACTTCCATCAAGCATTCAAAAAGTAGATGCAAGATATTGCCTATCCTTAACTCCASRGTCCTCAACCATGCCATTGTCCAAGATTTTACAAGAGACTAAAAGAATTGAAGTTGTGATGCCAAAAAAGGAGATTCCCAATTGGCTTGACTACAATTGCAGCAAAGATATTCCTCTGTTTTGGGCTCGGCGAAAGTTTCCTGTTGTTGCTTTAGCATTCATGTTTGGGAGAGCCACTGGCAATGATATTGATGAGACATTGATGAAGGCTCTAGACTTCTGGCCTCAAATTGCTTCATCCAAATCCTACACTGTTGGTCTCAACTTGTTTATAGAAGGCCAACAAATATTTCCGGAGAAGTCCAAATATTTCAATGTTGGGGAAGATCATGTGTTACTTTTCGATCTTCGAACCTTGTTCAGTGACAAAGAGTGGCATGATCTTGATGCATATATTGGAGATGATTGGAAAGCCATTCATGTTGTATGTGAATCAACCTTAACTCTGAATCATTGGGGAGTTTATGTTTACAAGGGAGAGACAAACATGGATGATATTTATTTCAAGCATCTTCCCAACCACAAATTGTCAAGCGASTTAGTTCTAGAAAGAAGTCCRCAACAAACTCGGCAAAGAATTGGACAAGTGATAGATAATTTGAATCCAACAGAAACATTTGACAATGAGCATTTATCTCTTGTTGATCTAGAAGAAGATAGTATGAGTTTTACAAAGGCATTGGTGAGGTCGTACAAGATGGCTAAGGCTAACGAAGCTTCTTCGTCATCTAACTATGGGGCAAGTTTGAAGAAAGAATCAGAAGAATCTAATTGGGACGTGTTGCGGTTAATAGAGTTGATGAAGGAGAATGTGCCAAAAGATATTGCTGATTCAAACCCTGGTCAAATACAAGCTGTACAAGAATTCGCAGAAGAGTTTWTTAAGGCACGTGCACAATTTATGATGGAGAAAGACTGCGACAYGTTGAATATTGGTATGATGATTGCTTTAGAGGAATACCATATTTTTGGACCTCCAACTCGTCGTTATTGGGGAAGAATAGATTTAAAACATGCAGATGATCCAACATTCAAAGCAGTGATGAGGAGGGCATTCCAAGAATCATGGAGAATTGAAGAACGCGCCAAAGCACACAATAGAAGGATGATTCCCATTCTTCTATTGAAATGCGAGATTCCATCCATATGGGGGGAATCGTCGCAGAAGGAAGAATCCATTGATGATCCTGTATTGGAAGAATTATTGAGGCAGATAGAGAAAGATGCCATGGAATGTAACAAGTCATATGGTAAATTGAAGGCATCTATTACTTATACTAATGAACTACGAGCAGTTTCTGATGAATATTTGCTGGAAGCAACGTACATGAGAGCACATGAAAATATGGAAAATGAAGTCATGTCAGAATGGGGAAGGTTAGAATTGGCATTATGTGACATGTTCAGATCAAGAATGCGAAGATCATTGTTTGGTTGGAGAAAGCTCATGATTCCTGGAGCTAGTACTAAGAAGACCTCTTATGGGACAATTAGAGTGGCACACGAAGATCAAGACACTCATGATAATAATCGAATGCAGCATAATAAGCTGTGGCGTATCCAGATTCCAAGGTTCCTTTTTTTGGAAATTTGGTCTGTGGTACTTGGGATGGTCTAA 4218 0.3931 MANDDVFLSFRGGTRYRFTDHLYHALRRNGIDTFRDDENLRVGDELRPVLMNAIENCKMAIVVLCENYASSTWCLDELVKIVDCHEKQGKQVLPIIYRMKPSDVWEQKGSYETAMAKHEDRYGKDSEKVKAWRLALSKVNTLKLIKWLHCTENTYEPEFIKNIVRDTADRLPLPEPIQHVVGLDTCCEQVKSVLNIESNENICMLGIYGPGGIGKTTLARCLFDKIKRQFEASCFLGNVREKSESRGSLESLQKTVLYDMGEETITDLGSEFKGGYEIKRRLRHKRVLLVLDDVNSITQLESLAGGHDWFGSGSRIIITTRDTDVVDKHVMGDVVTKKYKMEELNDDDSLELFSWHAFNRKEPAENFKNVSRNAIXYAKGFPLALEVIGSHLGGFTSVDSWEEELHKYRIDPSIQGVLEISYNSLYELDQKTFLDIACFFKGEKWDYVKRVLKACDFYPIVRVFISKCLITVNQSGCLDMHDLVQDMGKEIVMNESPTNPGERSRLWSHKDILQVLKDDTGSSSIEGIMLHPSTLEEVNYWINTAFDKMEKLRILIVRNTVFSTAPSHLPNSLRLLEWKGYPSESFPLDFHPHRIVDLKLPHSALKLERPFQVFEDLTFINLSQCQSVTHIPDMSGAKSLRVLTLDKCNKLVGFDESIGFMPNLVYLSASQCSKLKHFVPEMYLPSLEVLSFYFCKSLQSFPEIMQEMDKPLKINLVNSAIEEFPNSIGNLTGLEHIDISKSKRLRYLPGSFLMLPKLFTLTIDGCSLLGRSFKRFKGHSSPNIRRLNFSGANLSDEDLHPILHVHQKLEGINVSNNCFSSLPKCIEGFLHLKILDVSYCNNLMIIPELPSSIQKVDARYCLSLTPXSSTMPLSKILQETKRIEVVMPKKEIPNWLDYNCSKDIPLFWARRKFPVVALAFMFGRATGNDIDETLMKALDFWPQIASSKSYTVGLNLFIEGQQIFPEKSKYFNVGEDHVLLFDLRTLFSDKEWHDLDAYIGDDWKAIHVVCESTLTLNHWGVYVYKGETNMDDIYFKHLPNHKLSSXLVLERSPQQTRQRIGQVIDNLNPTETFDNEHLSLVDLEEDSMSFTKALVRSYKMAKANEASSSSNYGASLKKESEESNWDVLRLIELMKENVPKDIADSNPGQIQAVQEFAEEFXKARAQFMMEKDCDXLNIGMMIALEEYHIFGPPTRRYWGRIDLKHADDPTFKAVMRRAFQESWRIEERAKAHNRRMIPILLLKCEIPSIWGESSQKEESIDDPVLEELLRQIEKDAMECNKSYGKLKASITYTNELRAVSDEYLLEATYMRAHENMENEVMSEWGRLELALCDMFRSRMRRSLFGWRKLMIPGASTKKTSYGTIRVAHEDQDTHDNNRMQHNKLWRIQIPRFLFLEIWSVVLGMV* 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1902 1405 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 1091 - -
Amo08g1902 1405 SUPERFAMILY L domain-like 537 870 - -
Amo08g1902 1405 Pfam TIR domain 5 167 IPR000157 GO:0007165
Amo08g1902 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 436 IPR027417 -
Amo08g1902 1405 SMART till_3 3 142 IPR000157 GO:0007165
Amo08g1902 1405 Pfam NB-ARC domain 186 407 IPR002182 GO:0043531
Amo08g1902 1405 Gene3D Ribonuclease Inhibitor 530 713 IPR032675 -
Amo08g1902 1405 Gene3D Ribonuclease Inhibitor 714 886 IPR032675 -
Amo08g1902 1405 Gene3D - 343 426 IPR042197 -
Amo08g1902 1405 Gene3D - 168 333 IPR027417 -
Amo08g1902 1405 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 141 IPR035897 -
Amo08g1902 1405 CDD AAA 188 324 - -
Amo08g1902 1405 PRINTS Disease resistance protein signature 378 392 - -
Amo08g1902 1405 PRINTS Disease resistance protein signature 204 219 - -
Amo08g1902 1405 PRINTS Disease resistance protein signature 827 843 - -
Amo08g1902 1405 PRINTS Disease resistance protein signature 281 295 - -
Amo08g1902 1405 ProSiteProfiles TIR domain profile. 2 171 IPR000157 GO:0007165
Amo08g1902 1405 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 1091 IPR044974 GO:0006952
Amo08g1902 1405 SUPERFAMILY "Winged helix" DNA-binding domain 414 517 IPR036390 -
Amo08g1902 1405 Gene3D - 2 167 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1902 Amo-Chr8 31052998 31059099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1902 18 777 WRKY Transcription Factor Family AT4G12020 31.226 1.43e-82 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1902 - - aip:107611494 2758.4