Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1856 ATGGCTATCCCTCTGGTGGTTACCGTTCTCTTGGCCTTAGCCTCCACCATAACGCCGCGGACGACCTCGGCAGCCTTCGTCCCCCGAGACAACTACCTGATCGATTGTGGCTCGGAAACCGGAACCACCCTCCCAGACGGAAGAACATTCAAAGCAGACCCACAAGCCAACACTTACTTGCAAGCCAATGATCAAAACAAGGTGTCAATAGAAAATGGCAATAATAACCCTGATCTCCCAAATCAATTGTACTCAAGTGCAAGAATCTTCATGCAAGAAGCCAAGTACTCCTTCCATTTAATCCAACCGGGTTACCATTGGGTTCGCCTTTATTTCTACCCGATCAAGAACAATATCTTTGATCTCCAAAAAGCCACTTTCTCCGTTAACGCCTATAAATACGTTCTTCTCCATAGCTTCAATGTTAACAACAATGACAAGCCAATTCTCAAGGAGTACCTCATTAATGCAAATGAACCCATCTTCACGCTCTCTTTTACTCCGTTGAAGAACTCAGCTGCATTTATCAATGCCATAGAAATCGTATCCGTCCCGGACAACCTTCTATTCGACTCCGGCTCGAACCTTTTCCCGGTCGGCGATTACTCCGGCCTGACTAACCACGCTTTCCAGCCGGTTTACAGGATCAACAACGGCGGACCTCTTGTKACCGCMACAAACGACACTTTAGGACGGAATTGGGAGAACGACGAGCCTTATATAACGGTGAAGAACGCAGCCATGAGTGTCGTTGTACCTACAAACATTATCAAYTACCCTACGAATAATCCAAATATCTCTCCACTTATTGCTCCGCCGACGGTTTACGCCTCGGCGACGGAGATGACTAACGACTCTGCAGTGGATCAGCCGAATTTCAATATAACTTGGAAGTTTGATGTGGATACTTCTTTTAGCTACCTTGTAAGGTTGCATTTCTGCGACATTGTAAGCAAAGGTTTGAACGAGCTTTACTTCAACGTCTACATCAACGAGAAAACCGCGATTCCGACGCTTGATTTGTCCAGCATTACGCAAGCCTTGGCGACTCCTTATTACAGAGATTTTGTTGTGAATGCGACGTTGATGTCTCAGGAAGGACTAAAGATTCAGGTGGGAGCATCGCTGGCGCGAGGAGGAAGCGGGAACGCGATCGTGAATGGGATAGAGATCTTGAAGATAAGTAACTCTTTGGACAGTTTGGATGGCCAATTCGGCCTTGATGGGAGCAATGGCGGTGGTAGCTCTTACCGCGGCGCGGTGGCCGGGGTTGGATTCGCGATGATGTTTGGAGCGTTTGTTGGACTTGGCGCCATGGTGATCAAGTGGCACAAGAGGCCTCAAGATTGGCAGAAACGGAACAGTTTTTCGTCGTGGTTGCTTCCGGTGCACGCCGGAGATAGTACCTTTATGAGCAAGAATGCGTCAGGGAAGAGCAATTTCTCTGCCACTATGGGTTTAGGCCGGTTCTTCTCTTTGGCGGAGCTGCAAGAGGCAACTAATAACTTCGATAAAGCAAACATTATCGGTGTTGGTGGATTCGGCAATGTGTATTCCGGCGTCATTGATGATGCGACTCAAGTTGCGGTGAAGAGAGGAAATCCGCAATCGGAACAGGGGATTAACGAATTCCAGACWGAGATTCAAATGTTGTCTAAGCTTAGGCACAGGCATTTGGTMTCTCTTATTGGATACTGCGACGAAAACGATGAAATGATTTTGGTTTATGAGTACATGCCTAATGGACACTTRAGGGACCATCTTTATGGCAAGAACATGGTCGGACCACCGCTTTCTTGGAAGCAAAGATTGGAAATCTGTATCGGAGCTGCTCGCGGTCTTCATTATCTTCACACCGGCACGGCACAAGGTATCATCCATCGCGARGTTAAGACAACTAACATATTGCTTGACGAGAATTTCACGGCCAAGGTTTCTGATTTTGGTTTATCAAAGGATGCACCTATGGGGCAGGGTCATGTCAGTACGGCGGTTAAGGGTAGTTTTGGGTATTTGGATCCTGAATACTTCAGGAGACAACAATTGACAGAAAAATCRGATGTCTATTCATTTGGAGTGGTGCTTCTTGAGGCCTTATGTGCAAGGCCTGCTATTAATCCTCAGTTACCCCGCGAACAAGTKAACTTGGCTGATTGGGCTATGCAATGGAAGAGAAAGGGATTGCTTGATAAGATCATTGATCCTAATCTTGTCGGCACCATTAACCCCGAATCGTTGAAGAAGTACGCCGAGGCGGCCGAGAAGTGCTTGGCMGATCATGGTGTTGATAGGCCTTCAATGGGAGATGTGCTTTGGAATTTAGAGTATGCTTTGCAGCTTCAAGAGGCCTTCACACAAGAAGGAAAGGCAGAGGATGAGACTCCGGCTGTCCCAGCCTCAGCCTCATCCCCAGCCTCGGCTGTTCTGCCTCCGGCCGCTCCTGCGTCTTCCAATGCCTTAGATGAGGCTGTCCCTGTTCCAGAAGGAAATAACCCCCCGCCCGAAACCCGGGCGATTGATGACCATTCTGGAACTTTGCAGTTTGCTAGGTTTAGCCTTAATGGCAGGTGA 2571 0.4776 MAIPLVVTVLLALASTITPRTTSAAFVPRDNYLIDCGSETGTTLPDGRTFKADPQANTYLQANDQNKVSIENGNNNPDLPNQLYSSARIFMQEAKYSFHLIQPGYHWVRLYFYPIKNNIFDLQKATFSVNAYKYVLLHSFNVNNNDKPILKEYLINANEPIFTLSFTPLKNSAAFINAIEIVSVPDNLLFDSGSNLFPVGDYSGLTNHAFQPVYRINNGGPLVTATNDTLGRNWENDEPYITVKNAAMSVVVPTNIINYPTNNPNISPLIAPPTVYASATEMTNDSAVDQPNFNITWKFDVDTSFSYLVRLHFCDIVSKGLNELYFNVYINEKTAIPTLDLSSITQALATPYYRDFVVNATLMSQEGLKIQVGASLARGGSGNAIVNGIEILKISNSLDSLDGQFGLDGSNGGGSSYRGAVAGVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPVHAGDSTFMSKNASGKSNFSATMGLGRFFSLAELQEATNNFDKANIIGVGGFGNVYSGVIDDATQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPNGHLRDHLYGKNMVGPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHREVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPNLVGTINPESLKKYAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQEGKAEDETPAVPASASSPASAVLPPAAPASSNALDEAVPVPEGNNPPPETRAIDDHSGTLQFARFSLNGR* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1856 856 Pfam Malectin-like domain 34 393 IPR024788 -
Amo08g1856 856 Pfam Protein tyrosine and serine/threonine kinase 507 703 IPR001245 GO:0004672|GO:0006468
Amo08g1856 856 Gene3D Transferase(Phosphotransferase) domain 1 579 797 - -
Amo08g1856 856 ProSiteProfiles Protein kinase domain profile. 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1856 856 PANTHER BNAC03G60370D PROTEIN 17 828 - -
Amo08g1856 856 PANTHER OS07G0166700 PROTEIN 17 828 IPR045272 GO:0004714|GO:0006468
Amo08g1856 856 SUPERFAMILY Protein kinase-like (PK-like) 479 775 IPR011009 -
Amo08g1856 856 MobiDBLite consensus disorder prediction 786 844 - -
Amo08g1856 856 Gene3D - 31 184 - -
Amo08g1856 856 Gene3D - 210 396 - -
Amo08g1856 856 Gene3D Phosphorylase Kinase; domain 1 467 578 - -
Amo08g1856 856 CDD STKc_IRAK 509 775 - -
Amo08g1856 856 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1856 Amo-Chr8 30438102 30440864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1856 25 856 Receptor kinase-like Gene Family AT4G39110 64.804 0.0 1094
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo08g1856 Malectin_like 1e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1856 - - gmx:100790759 1299.65