Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1835 ATGGGGAGTGAAAAGGTTGGAAGTTGTGGAAAATTGATAGAGAGCTCAAAACCGTATTTTGCAATGATGTCATTACAATTTGGATATGCTGGCATGAATGTTATTACTAAGCTTTCTCTTAATCAAGGCATGAGCCACTATGTTCTTGTTGTTTATCGCCATGCCTTTGCAGCTGCTAGCATTGCCCCATTTGCCTTTATTTTTGAAAGGAAAGGTCAACCAAAGATAACATTCTCAGTTTTCATGCAACTTTTCATTCTAGCTCTGCTTGGGCCAGTGATTGATCAAAATTTTTACTATGCTGGGTTGAAGCTTACATCCCCAACCTTTTCATGTGCAATGAGCAACATGCTTCCGGCCATGACTTTCGTTATGGCAGTTATATGCCGGATGGAAAAGATAGACATGAAGAAAGTGAGATGCCAAGCTAAGGTAGTGGGAACATTAGTGACAGTTGCTGGGGCCATGCTGATGACATTATACAAAGGACCTATCATGGAATTGGTATGGGCCAAACATAGAGAAACTCATCACAACAACACCAATTCTTCATCATCAACAACCTCCAAAGGTTCCTCTGAAAAAGATTGGTTCTTAGGATGCACTTTCCTCATCATTGCTACCCTTGCCTGGGCTTCCCTCTTTGTTCTACAAGCCAAAGCTATACAAACGTACAAGAATCATCAACTAAGCCTGACATCACTTATCTGCTTCATAGGAACTCTTCAAGCTACTGCGGTTACTTTTGTTATGGAACACAATCCTTCTGTTTGGAGAATTGGCTGGGACATGAACTTACTTGCTGCAGCATATGCTGGGATTGTGACATCAAGTATATCATACTATGTACAAGGGTTGGTAATTAAGAAGAAGGGACCTGTCTTTGCAACTGCCTTTAGCCCTCTTATGATGATCATTGTTGCCATCATGGGCTCCTTCATCCTTGCTGAGCAAATTTATCTTGGAGGTGTGGTTGGTTCCATCTTGATTGTAATAGGCTTATACTCTGTTCTATGGGGAAAGCACAAAGAACAAATAGAAACCAAAATGGGACATCATGATGATAATGATATACATTTGCCTGTTACAAAAGGTGGTGCTCAAAATTTTGGAAATGAAGACTCAAAAAATGATGCCACAGTAGATCATTGCACCCAAGAAAATTTTGATCACAAAGAATTCAACAAGGAGAAGCACTACTCTTCGGTTGTAATAGGCATGACTAACCAAGAGACAAATAAATAA 1245 0.4 MGSEKVGSCGKLIESSKPYFAMMSLQFGYAGMNVITKLSLNQGMSHYVLVVYRHAFAAASIAPFAFIFERKGQPKITFSVFMQLFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVICRMEKIDMKKVRCQAKVVGTLVTVAGAMLMTLYKGPIMELVWAKHRETHHNNTNSSSSTTSKGSSEKDWFLGCTFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLICFIGTLQATAVTFVMEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVVGSILIVIGLYSVLWGKHKEQIETKMGHHDDNDIHLPVTKGGAQNFGNEDSKNDATVDHCTQENFDHKEFNKEKHYSSVVIGMTNQETNK* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1835 414 PANTHER WAT1-RELATED PROTEIN 12 368 - -
Amo08g1835 414 PANTHER WAT1-RELATED PROTEIN 12 368 IPR030184 GO:0016021|GO:0022857
Amo08g1835 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 343 - -
Amo08g1835 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Amo08g1835 414 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020|GO:0016021
Amo08g1835 414 Pfam EamA-like transporter family 199 338 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1835 Amo-Chr8 30151922 30156651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1835 1 357 Nodulin-like Gene Family AT5G07050 71.588 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1835 - - gmx:100804390 590.497