Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1815 ATGGAACAAGCAATTTGTGAAGGCGCATTGTACGGTACAACATATGATAATATTGATCAGTATAATTCTTGCGACGTTAATGTTCCATCGCTTAGTGAAGATGACACACATCATGTGGACAAGGGGAAAGATTCTGGAAGCGTTATTGAAGTAGTGGACGATGCAATGGCAGTGAATAATGAGTTACCCGATCACACTGGAATTCCATTAGATGAAATCCCGTACTTTTATACTAATTATGCAAAGAAAGTTGGCTTCGTGACCAGGATTAGGAACACCAACTTTGACAAGACCAGGAAGGATTCAATGATACCTGTTAACCAATCGTTACACTGTAGTTGTGAAAGTTATCGGGAGTCTCGAGTGAAGGCAGCAACTCGGGTAAAGCGAATAATAACAGCCGGATGCAAAGCAAGGATGTACGTCATGCTTGATAGACAGAAGGATAATTGGATGGTCTCCAAACTAGAACTGAAGCACACCCACCCGTGTTCTGCCAAGCAAGCTATGCACTACATTGAGTACAGGGAACTGACCATGCATGTCAAGTACCTTATGACGAACGTCGAATGTGGGTTCCAATCTATTTTCAAGGTTTAG 600 0.4217 MEQAICEGALYGTTYDNIDQYNSCDVNVPSLSEDDTHHVDKGKDSGSVIEVVDDAMAVNNELPDHTGIPLDEIPYFYTNYAKKVGFVTRIRNTNFDKTRKDSMIPVNQSLHCSCESYRESRVKAATRVKRIITAGCKARMYVMLDRQKDNWMVSKLELKHTHPCSAKQAMHYIEYRELTMHVKYLMTNVECGFQSIFKV* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1815 199 Pfam FAR1 DNA-binding domain 76 164 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1815 Amo-Chr8 29877022 29880914 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo08g1815 FAR1 4.2e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1815 - - ahf:112803266 374.4