Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1780 ATGGAGTTGCTTCTTCAATTATCTACTTATCTATGCATAGCTTCTCTTCTTCTTATTATCAGCAGTGAAGCAAACACAGATCAAATTCCTAAGCATTATGTTGTTTATATGGGAAGTTCATCAATTTCTGAATCATCACATTTGGAGCTATTGTCTTCGGTTATTCCAAGAGAAGAGAAGAAGAGGGTATCTCTAATCCACCATTTCAGGCATGCCATGAGTGGGTTCTCTGCCATGCTTACAGAAAGAGAAGCTTCTGCACTTTCTGGGTATGATGGAGTAGTGTCGGTGTTCCCAGATCCAATTTTGGAATTGCATACGACCCGATCTTGGGATTTCTTGGAATCAGATTTGGGGATGAACAACAACACTAGTGCACATTTCTCAACTAAGAGTGATATCATTATTGGGATCATTGACACTGGGATATGGCCAGAGTCTCCAAGTTTTAGAGATGAGGGTATAGGGAAGATTCCTTCAACATGGAAAGGAGGTTGCATGGAGGGTCCTGATTTCAAGAAATCCAATTGCAATAGAAAATTAATAGGAGCAAGATATTATAATAATATCCAACTTACATCAAGTGATGGTAAGAACCTTACTCTTACAAAAACAGTAACGAAAGGGTCCCCAAGAGATTCAGTTGGACATGGAACTCACACTTCATCAATAGCAGCTGGTTCCATAGTCAACGATGCTACCTACTATGGTTTAGCAAAAGGAACAGCAAGAGGTGGTTCACCTTCTTCAAGAATTGCTGCATACAAAACATGCTCTGAACAAGGCTGCTCTGGAGCTACCTTATTGAAGGCCATTGATGATGCTATTAAGGATGGTGTTGACATAATCTCTATTTCCATTGGTCTTAGCTCGCTTTTCCAGTCCGACTTTTCCAAGGATCCGATCGCCATTGGAGCGTTCCATGCCGAGCAATTTGGGGTCATGGTGGTTTGCTCGGCAGGGAACGACGGCCCGGATCCTTACACGGTTGTGAACGCAGCACCATGGATTTTTACAGTTGCAGCTTCAAATATTGATAGGAACTTCCTCTCTACTATTGTCCTTGGCAATGGAAAAATGTTCCAAGGTATAGGCATTAACTTTTCAAACCTCACACGTTCAAAGATGTATCCTCTTGTATTAGGGGAGGAAGTTGCCGCTAAATTTGCCCCTGCATCCGAAGCTAGGAATTGTTATCCTGGATCACTAGATTACAACAAAGTTGCAGGGAAGATTGTTGTTTGTGTTAATGATGATCCAACTATTTCAAGGAAAATCAAGAAGCTTGTTTTACAAGATGCAAAAGCCATGGGGATGATACTCATTGATGAGGAGAAAAAAGATGTTCCATTTGATGCAGCTGTATTTCCTTTTTCAGAGGTTACCAATCTTGAAGGCCATCAAATCCTTCGGTATATAAACTCCACTAAGAATCCAACTGCAACAATTCTTGCAACAAGAGAAGTTACAAGATACAAGCCCTCACCTATTGTTGCATCTTTCTCATCTAGAGGTCCTTCAGTCCTAACTGAGAACATTCTCAAGCCAGATGTTATGGCTCCAGGCGTTGGCATTTTAGCTGCCATGATTCCCAAAAGTGATGAACCAGGAATTATTCCAATAGGGAAAAAACCCTCCTTATTTGGCATAATGTCAGGTACATCTATGGCATGCCCACATGTTACAGGTGCTGCTGCTTTTATTAAATCTGTTCATAGAATGTGGACTCCTTCTATGATCAAATCAGCATTGATGACAACAGCTACAACATACAATAACTTGAGGAAGCATGTGACCAATAGCTCAAACTTWTTTTCCTCCCCACATGAAATGGGAGTTGGGGAAATTGATCCACTTAGAGCTCTCAACCCTGGCTTAGTCTTCAAAACGGAATTAGAAGACTATCTCAAATTTCTTTGTTATTATGGCTATTCAAAGAAAAACATAAGATCAATGTCTAAGAKTAACTTCAACTGCKCAAYGAACTWCTCTGAAGATRTTATATCCAARATCAARTACCCATCAATATCTATAAAAACACTTGGTAGGCATCAGAAAGCAAAAGTAGTCACAAGAACAGTCACAAATGTGGGACCCACTAATTCCACATATATTGCAAAGGTGCAAGCACCAAAGGGAATGGTTATCAAGGTTACCCCCAATAAGCTTGTGTTTTATGGGGGTATTCAAAAGAGATCTTATCAAGTCTCATTCTACAACAATGATGCACAAAGTGGATACAATTTTGGGTCTATAACCTGGCTTGATGGTAAACATTATGTTCATACYATATTTGCAGTCAATACTAAATGA 2313 0.3982 MELLLQLSTYLCIASLLLIISSEANTDQIPKHYVVYMGSSSISESSHLELLSSVIPREEKKRVSLIHHFRHAMSGFSAMLTEREASALSGYDGVVSVFPDPILELHTTRSWDFLESDLGMNNNTSAHFSTKSDIIIGIIDTGIWPESPSFRDEGIGKIPSTWKGGCMEGPDFKKSNCNRKLIGARYYNNIQLTSSDGKNLTLTKTVTKGSPRDSVGHGTHTSSIAAGSIVNDATYYGLAKGTARGGSPSSRIAAYKTCSEQGCSGATLLKAIDDAIKDGVDIISISIGLSSLFQSDFSKDPIAIGAFHAEQFGVMVVCSAGNDGPDPYTVVNAAPWIFTVAASNIDRNFLSTIVLGNGKMFQGIGINFSNLTRSKMYPLVLGEEVAAKFAPASEARNCYPGSLDYNKVAGKIVVCVNDDPTISRKIKKLVLQDAKAMGMILIDEEKKDVPFDAAVFPFSEVTNLEGHQILRYINSTKNPTATILATREVTRYKPSPIVASFSSRGPSVLTENILKPDVMAPGVGILAAMIPKSDEPGIIPIGKKPSLFGIMSGTSMACPHVTGAAAFIKSVHRMWTPSMIKSALMTTATTYNNLRKHVTNSSNXFSSPHEMGVGEIDPLRALNPGLVFKTELEDYLKFLCYYGYSKKNIRSMSKXNFNCXXNXSEDXISKIKYPSISIKTLGRHQKAKVVTRTVTNVGPTNSTYIAKVQAPKGMVIKVTPNKLVFYGGIQKRSYQVSFYNNDAQSGYNFGSITWLDGKHYVHTIFAVNTK* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1780 770 SUPERFAMILY Subtilisin-like 105 626 IPR036852 GO:0004252|GO:0006508
Amo08g1780 770 Pfam Subtilase family 132 593 IPR000209 GO:0006508|GO:0008236
Amo08g1780 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 106 IPR037045 -
Amo08g1780 770 ProSiteProfiles Serine proteases, subtilase domain profile. 110 622 - -
Amo08g1780 770 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Amo08g1780 770 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Amo08g1780 770 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Amo08g1780 770 Gene3D - 639 769 - -
Amo08g1780 770 CDD Peptidases_S8_3 103 589 IPR034197 -
Amo08g1780 770 PANTHER CUCUMISIN-LIKE 40 767 - -
Amo08g1780 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 767 IPR045051 -
Amo08g1780 770 CDD PA_subtilisin_like 352 483 - -
Amo08g1780 770 Pfam Peptidase inhibitor I9 33 106 IPR010259 -
Amo08g1780 770 Gene3D Peptidase S8/S53 domain 133 635 IPR036852 GO:0004252|GO:0006508
Amo08g1780 770 Pfam Fibronectin type-III domain 673 767 IPR041469 -
Amo08g1780 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Amo08g1780 770 Gene3D - 346 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1780 Amo-Chr8 29359431 29380784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1780 33 770 Subtilisin-like Serine Gene Family AT1G20150 43.211 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1780 K25898 - gmx:100781053 1125.15