Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1776 ATGGAAGAAGGGTTATGTCAAAACTCATCAGATTCTGKTTATAAGTTAGGGATTGTAGATGTTAAACCCTTGCGTAGTTTGGCACCAGTGTTCCCGGAATCTACGCTAGGTTCTACATCTGCCCAGCCCCCATATGGATTTTCTCCATTTTTGCCCGTGGGTGTAAATCAAGAATCTCGAGCATCCCCTGCTCCGACGCCAGCTCCGGTTCCGGCTCCTGCGCCAGCTCCGGTTCCGGCTCCTGCGCCTGCGCCAGTAAGGTCATTTAGGAGTTCAGTAGTTGAAGAAGAAGCCCCGCGTGGAGCTGATGGTGATGGTTCTTCATCAATGGAGGGGCTTAGTGGTGCTGCTAATGACCGAAACCATGCAGCRCCAGATATGTGTGGAAGCAAACCACCTCCTGGTTCTATTCCAGCTCCGGTTCCATTAAGGTCCTTTAGGAGCCCTCTGGATGAAGAAGAAACCCTGCACGGAGGAAATGGTGATGGTTCTTCGTCCGTGGATGGGCTCAATGGTGTTGTTAATGACCAAAATTGTATGGCACCACATATGCGTGGTTGCAAGTCATCTAACACATCTATACCGGCTCCGACTCCATTACGGGTCTATAGGAGCCCCCTAGTTGAAGAAGTAAACCTACGTGGACCTAATGCGGATGCTGGTTCATCATTTGAAGGGTTCAATGGTGTTGCTAATGCCCAAAAGCGTTCAGAACCAAATTCACAAGGCACCAAATCATCCCAAAAGAGGAGCAGGGTAAATCAAGATTCAGATTTTGTATTGTCTTCGTCGATCAGTCTTAGTCCAGAAAAAAGGAGTGACGCTGACCGTGAGACAGTTAATTTTGTACTCAYGACATTTGATGCTCTTCGAAGAAGGCTATTGCAACTTGAAGAAGCCAAGGAATTGAACACGACTGGTGTTATCAAGCGTGCAGATTTAAGAGCTAGCAATACTATGACACTCAAATATGATGATGATACAGAGGATAATGATATTTTGGTATATAGTGGTCAGGGTGACTTCCACAAGAAAGATAAGAATGCGACTGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTGGATAAAAGTTCACAACGGCATAATGAAGTAAGAGTCATCCATTCTTGGATAGAAAGGGGGAAATCTGGTGGTGGCATTTTTAAGTATAAGTTTGTAAGATTGCCTGAACAGCCCAGTGCTTTTGCTGTTTGGAAATCAGTTCAGAAATGGAAAGAAGGCACCCTTTCAAGGAGTGGTCTTATTATTAAAGATCTCTCTTCAGGAATCGAGAGTATTCCTGTATCACTTGTCAATGAGGTTGATAATGCAAAGGGTCCTGGTTTCTTCACTTATGTTCATTCTCTCAAAAACCCAAAACCATTTGGTTCAATTATGTCTTCTCATGGATGCAATTGTAACAAAGCATGTGTCCCAGGAGATTTGAGTTGCTCTTGCATTCAAAGAAATGTTGGTGATTTTCCATATATTGCAAATGGTTTTCTAGTAAGTCGGAAGCCATTGGTTCATGAATGTGGCTCTATGTGTCGTTGTCTTCCGAATTGCAAAAATCGAGTGTCCCAGTCTGGTTTAAAGCATTACATGGAAGTGTTCAAAACGATGGATCGAGGGTGGGGTCTTCGATCATTGGATCCTATTCGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTTGTTGACAGAGCCAAGTTAAGTGTGAACGGGAGGGAAGGAGATAATGAGTACATATTTGATACAAGCCGTATTTTTAAACCTTTCAAGTGGAACTATGAACCTAGCTTATTGGAAGACGGGGCTTCAAGTGATGGCAATGAAGATTATGATATACAATCCCATCTAATTATAAGCGCCAAAGATTTTGGGAACGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCAGTTGTATATCATGAAAACAATCAATCCTTCCTTCACATTGCATTTTTTGCCCTAAGACACATTCCTCCGATGACAGAGTTAACATATGATTATGGAGTTACCCGCTCTGGTCATGCTGAGGGTAGCAGTTCATCCAAGGGAAGGAAGAAATGCTTTTGTGGATCCCCAAAATGRTATGGTTCTTTTGGTTGA 2133 0.4327 MEEGLCQNSSDSXYKLGIVDVKPLRSLAPVFPESTLGSTSAQPPYGFSPFLPVGVNQESRASPAPTPAPVPAPAPAPVPAPAPAPVRSFRSSVVEEEAPRGADGDGSSSMEGLSGAANDRNHAAPDMCGSKPPPGSIPAPVPLRSFRSPLDEEETLHGGNGDGSSSVDGLNGVVNDQNCMAPHMRGCKSSNTSIPAPTPLRVYRSPLVEEVNLRGPNADAGSSFEGFNGVANAQKRSEPNSQGTKSSQKRSRVNQDSDFVLSSSISLSPEKRSDADRETVNFVLXTFDALRRRLLQLEEAKELNTTGVIKRADLRASNTMTLKYDDDTEDNDILVYSGQGDFHKKDKNATDQKLQRGNLALDKSSQRHNEVRVIHSWIERGKSGGGIFKYKFVRLPEQPSAFAVWKSVQKWKEGTLSRSGLIIKDLSSGIESIPVSLVNEVDNAKGPGFFTYVHSLKNPKPFGSIMSSHGCNCNKACVPGDLSCSCIQRNVGDFPYIANGFLVSRKPLVHECGSMCRCLPNCKNRVSQSGLKHYMEVFKTMDRGWGLRSLDPIRAGTFICEYAGEVVDRAKLSVNGREGDNEYIFDTSRIFKPFKWNYEPSLLEDGASSDGNEDYDIQSHLIISAKDFGNVARFMNHSCSPNVFWQPVVYHENNQSFLHIAFFALRHIPPMTELTYDYGVTRSGHAEGSSSSKGRKKCFCGSPKXYGSFG* 711
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1776 710 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 16 321 - -
Amo08g1776 710 SMART G9a_1 299 398 IPR003105 -
Amo08g1776 710 ProSiteProfiles SET domain profile. 533 679 IPR001214 GO:0005515
Amo08g1776 710 SMART preset_2 423 517 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Amo08g1776 710 Gene3D - 304 378 IPR036987 -
Amo08g1776 710 Pfam SET domain 544 679 IPR001214 GO:0005515
Amo08g1776 710 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 323 376 - -
Amo08g1776 710 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 376 708 - -
Amo08g1776 710 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 376 708 - -
Amo08g1776 710 SMART set_7 533 685 IPR001214 GO:0005515
Amo08g1776 710 Gene3D SET domain 401 687 IPR046341 -
Amo08g1776 710 SUPERFAMILY PUA domain-like 323 429 IPR015947 -
Amo08g1776 710 MobiDBLite consensus disorder prediction 227 255 - -
Amo08g1776 710 ProSiteProfiles Pre-SET domain profile. 469 530 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Amo08g1776 710 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 16 321 - -
Amo08g1776 710 MobiDBLite consensus disorder prediction 31 172 - -
Amo08g1776 710 Pfam Pre-SET motif 427 525 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Amo08g1776 710 Pfam SAD/SRA domain 321 375 IPR003105 -
Amo08g1776 710 SUPERFAMILY SET domain 409 685 IPR046341 -
Amo08g1776 710 ProSiteProfiles YDG domain profile. 273 428 IPR003105 -
Amo08g1776 710 MobiDBLite consensus disorder prediction 213 255 - -
Amo08g1776 710 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 323 376 - -
Amo08g1776 710 MobiDBLite consensus disorder prediction 64 84 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo08g1776 Amo-Chr8 29341550 29344348 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1776 188 710 Su(var)3-9 homologs AT1G73100 43.301 9.46e-159 472
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo08g1776 SET 1e-22 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1776 K24405 - gmx:100817062 632.869