Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1754 ATGAGCAGCAGTGGCGGTTCTGGATCAAACTATTCAGGTGGTGAGCCACTGCCACCTCCTTCTCCAGGCATAGCATTAGGCTTCTCAAAGAGCACTTTCACATATGAGGAGTTGGCGCGAGCAACCAATGGCTTCTCCGACGCCAACCTCCTCGGATCAGGTGGATTCGGGTATGTGCATAGAGGAATTCTTCCCAACGGCAAGGAAGTGGCGGTGAAGCAGCTAAAGGCTGAAAGTGGGCAAAGAGAGCGTGAATTCCAAACTGAAGTAGAGATAATTAGTTGTAGGCTGCTTGTTTATGAATTTGTTCCCAACAACACGTTGGAATTCCATTTACACGGCCGTTTTATCGTCAAGTGTTGTTTTTTGAGTTTTGGGATATTAGGTGTCGTTTTGATTATTAAAGAAACTGCAAACTACACACTTGACCTTAGCTAA 438 0.4566 MSSSGGSGSNYSGGEPLPPPSPGIALGFSKSTFTYEELARATNGFSDANLLGSGGFGYVHRGILPNGKEVAVKQLKAESGQREREFQTEVEIISCRLLVYEFVPNNTLEFHLHGRFIVKCCFLSFGILGVVLIIKETANYTLDLS* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1754 145 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Amo08g1754 145 SUPERFAMILY Protein kinase-like (PK-like) 21 116 IPR011009 -
Amo08g1754 145 ProSiteProfiles Protein kinase domain profile. 45 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1754 145 Gene3D Phosphorylase Kinase; domain 1 27 96 - -
Amo08g1754 145 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 1 115 - -
Amo08g1754 145 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1754 Amo-Chr8 29019421 29019911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1754 33 113 Trihelix Transcription Factor Family AT4G32710 61.616 3.36e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Amo08g1754 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1754 - - gmx:100781944 193.356