Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1748 ATGCCCTCCGATTCCGTCGACAAATCCCCTTCCTCCTCTGCTCCACCTCCGCCTCCTCCACCTCCTCCTGCTCCTCCCTCTTCCTCCRCYTCCGCCTCTGCCTCCGTTTCCGCGCCCGCCAATGAYGATCTACCACCTCCACCTCCCCCGCCGCCGCATTCCTCCACCCGGAGGAGGGACAGGGACAGGAGGGATGATAGGGATTTTGATCGCCACTCTCACCGTCGTGGTGGCGCTRGCGGTGCYGGCGACTACTACGACCGGAACATGTCTCCCCCGCCGCCCCCTCCCAGGGACAGGGATAGAGACAGGGACTTCAAGCGCCGTCGCAGCCCCAGCCCTCCCCACCGCGACCGCCGCTATTCTCCCGCCTCGCGTCGCTCCCCTCCGCCGTATAAGCGATCCAGGAGGGGTAGTCCTCGTGGTGGTTATGACATTCAATTTSTAACAAACCTGTCTGGTTCATCATCTTTTAGGAGGAATGAAAATGCTCGACAGCTGGCAAAGAATTTTTTACTGGATCTGCAGAGTGGGACATTRGAACTAAATCCTGGTTTAAATGCCTCCTCATCCAGCAAATCAGGACCAGCAAGTGAACCAAATTCAGAGGAGGAAACAGAGACTGGAGGTAAAAGAAGAAGACATGGTAGGGGATCTGATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTGTCAGTTCTGASCTTAGACGGATACAAACTGATATTCAACAAGCACARGCACTTGTTCGTAAGCTTGACACAGAAAAAGGAATTGAAGACAATATTTTATGCAGCAGTAATCACAATAAAAATGATGACAAAGTTCACAGTGGCTCTGTAGGACCCATAATAATTATTCGGGGCCTGACATCTGTTAAAGGTTTAGAGGGTGTTGAGCTTTTGGACACACTTATTACATATCTATGGCGGATTCATGGTGTAGACTATTATGGTATGACTGAGACTAATGAGGCCAAGGGTTTTAGGCATGTGAGGGCAGAAGGAAATGGGCATGAAGAAACAGGCAGGTCAGGATCTGAATGGGAGAAGAAACTTGATTCATTTTGGCAGGGAAGGCTGAATGGTCAGGATCCCTTGGAAGTTATGACTGCTAAGGAGAAGATAGATGCTGCTGCAGTTGAGGTGTTGGATCCCTATGTGCGGAAAATTAGGGATGAAAAGTATGGATGGAAATATGGTTGYGGAGCTAAGAGCTGCACAAAGCTTTTTCATGCAGCAGAATTTGTGCACAAACATCTGAAGCTAAAACACCCAGAACTTGTTATGGAACAAACTTCAAAAGTGCGTGAGGATCTCTATTTTCAAAATTACATGAATGATCCAGATGCTCCTGGTGGAACGCCTATCATGCAGCAACCSCAGAAGGACAGACCTTTAAAGCGAAGATTGGGATTGGAAGGCCGGTTGAGAGACGATCGTGGTAATCGTCGAGATCATGATCGGARTGACAGGATAAATGATGGAGATAGGCCTGAGAGTTCCCCCAGCCGKGAGAGGCAATCTAAAGCACTCGAGATGGGGAATCATGATGAARCCATGTATGATACATTTGCTGGTCCTGGCGTACCTCCATTTGCTTCTGATATGCCGCCKCCTCCACCAGTGTTGATGCCTGTTCCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGAGAACAAGGAGGACCATCATACGATGCCCCGGGTAGGAAGATGCGCGCCGGCCATCCTATGGGTGGACCAGCACCAATAATTGCTGTTCCTCCAGCTTTCAGACAAGATCCTCGGCGGATGCGCAGCTATCAAGATCTTGATGCGCCGGAGGACGAGGTCACTGTGATAGACTATCGGAGTTTATGA 1899 0.4966 MPSDSVDKSPSSSAPPPPPPPPPAPPSSSXSASASVSAPANDDLPPPPPPPPHSSTRRRDRDRRDDRDFDRHSHRRGGAXGAGDYYDRNMSPPPPPPRDRDRDRDFKRRRSPSPPHRDRRYSPASRRSPPPYKRSRRGSPRGGYDIQFXTNLSGSSSFRRNENARQLAKNFLLDLQSGTLELNPGLNASSSSKSGPASEPNSEEETETGGKRRRHGRGSDKENDFSAAPKAHPVSSXLRRIQTDIQQAQALVRKLDTEKGIEDNILCSSNHNKNDDKVHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMTETNEAKGFRHVRAEGNGHEETGRSGSEWEKKLDSFWQGRLNGQDPLEVMTAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAAEFVHKHLKLKHPELVMEQTSKVREDLYFQNYMNDPDAPGGTPIMQQPQKDRPLKRRLGLEGRLRDDRGNRRDHDRXDRINDGDRPESSPSRERQSKALEMGNHDEXMYDTFAGPGVPPFASDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSYDAPGRKMRAGHPMGGPAPIIAVPPAFRQDPRRMRSYQDLDAPEDEVTVIDYRSL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1748 632 Coils Coil 238 258 - -
Amo08g1748 632 MobiDBLite consensus disorder prediction 204 227 - -
Amo08g1748 632 ProSitePatterns Zinc finger C2H2 type domain signature. 404 427 IPR013087 -
Amo08g1748 632 MobiDBLite consensus disorder prediction 94 124 - -
Amo08g1748 632 Pfam Arsenite-resistance protein 2 344 531 IPR007042 -
Amo08g1748 632 PANTHER ARSENITE-RESISTANCE PROTEIN 2 158 632 IPR039727 GO:0006397
Amo08g1748 632 PANTHER ARSENITE-RESISTANCE PROTEIN 2 44 145 IPR039727 GO:0006397
Amo08g1748 632 MobiDBLite consensus disorder prediction 444 536 - -
Amo08g1748 632 MobiDBLite consensus disorder prediction 181 240 - -
Amo08g1748 632 MobiDBLite consensus disorder prediction 181 203 - -
Amo08g1748 632 MobiDBLite consensus disorder prediction 146 162 - -
Amo08g1748 632 MobiDBLite consensus disorder prediction 573 601 - -
Amo08g1748 632 MobiDBLite consensus disorder prediction 465 519 - -
Amo08g1748 632 MobiDBLite consensus disorder prediction 54 78 - -
Amo08g1748 632 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 158 632 - -
Amo08g1748 632 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 44 145 - -
Amo08g1748 632 MobiDBLite consensus disorder prediction 11 28 - -
Amo08g1748 632 MobiDBLite consensus disorder prediction 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1748 Amo-Chr8 28864963 28872556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1748 150 632 C2H2 Transcription Factor Family AT2G27100 63.747 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1748 - - lang:109355022 729.939