Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1740 ATGTTGGAACTACCATTACTCAAAATGTCATTTCGTTTTACCAAATTCGATTTGAGGCATCTTCGTTACTTTGCTGAGAACCTGCACCCGGAGCTACTAGGTGGTGCGGTTGCTCTTGTCGCCGTTGGCCTCACCGCTGCTTATTTTTATCATCGGTTAACCAAAGTTCCCAAAAAATGCCTGGACCCCAACAACTTCAAAGAATTTGAACTTATAAAGAAGACCCAACTCAGCCACAACGCAGCAAGGTTCAAATTCGCCCTTCCAACTCCTACATCGGTGTTGGGCCTTCCAGTCGGAAAAAATATTCTTGCCAGGGGAAGAGATAGCAGCGGAGCGGAGGTTATGAAATCATACACTCCAATCACGTTGGATTCGGATGTTGGTTACTTTGAATTAGTTGTTAAGATGTACCCAAATGGAAAGATGTCCCACCATTTTAGACAAATGAAAGTTGGAGACAAGTTGGCTGTGAAGGGCCCCAAGGGGCGCTTCAGTTACAAGCCTGGTCAAGTTCGGGCATTTGGAATGATTGCTGGAGGTACAGGCATCACCCCAATGTTTCAGATCACAAGGGCCATTCTAGAAAACCCCAAGGATAAAACAAAGATTTCCCTTTTATATGCCAATGTGACGGTGGACGATATTCTATTAAAGGAAGAACTAGATAATTTTGCCAGCAAATATCCAAGTCAATTCAATGTCTATTATGTTCTTAATAAGCCCCCTAATGAGTGGAATGGTGGCGTTGGGTACATAACTAAGGATATGATTCAAACCCATTGTCCTGCACCAGCAAGGGATATCCAGGTTATTGATATATAA 825 0.4315 MLELPLLKMSFRFTKFDLRHLRYFAENLHPELLGGAVALVAVGLTAAYFYHRLTKVPKKCLDPNNFKEFELIKKTQLSHNAARFKFALPTPTSVLGLPVGKNILARGRDSSGAEVMKSYTPITLDSDVGYFELVVKMYPNGKMSHHFRQMKVGDKLAVKGPKGRFSYKPGQVRAFGMIAGGTGITPMFQITRAILENPKDKTKISLLYANVTVDDILLKEELDNFASKYPSQFNVYYVLNKPPNEWNGGVGYITKDMIQTHCPAPARDIQVIDI* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1740 274 SUPERFAMILY Riboflavin synthase domain-like 57 169 IPR017938 -
Amo08g1740 274 PRINTS Cytochrome B5 reductase signature 117 124 - -
Amo08g1740 274 PRINTS Cytochrome B5 reductase signature 214 225 - -
Amo08g1740 274 PRINTS Cytochrome B5 reductase signature 153 167 - -
Amo08g1740 274 PRINTS Cytochrome B5 reductase signature 95 106 - -
Amo08g1740 274 PRINTS Cytochrome B5 reductase signature 176 195 - -
Amo08g1740 274 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 156 271 IPR039261 -
Amo08g1740 274 Pfam Oxidoreductase NAD-binding domain 177 264 IPR001433 GO:0016491
Amo08g1740 274 PANTHER NADH-CYTOCHROME B5 REDUCTASE 9 272 - -
Amo08g1740 274 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 64 168 IPR017927 GO:0016491
Amo08g1740 274 PANTHER NADH-CYTOCHROME B5 REDUCTASE 9 272 IPR001834 GO:0016491
Amo08g1740 274 CDD cyt_b5_reduct_like 69 268 - -
Amo08g1740 274 Pfam Oxidoreductase FAD-binding domain 69 167 IPR008333 -
Amo08g1740 274 Gene3D - 157 272 IPR039261 -
Amo08g1740 274 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 176 195 IPR001709 GO:0016491
Amo08g1740 274 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 214 225 IPR001709 GO:0016491
Amo08g1740 274 Gene3D Translation factors 58 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1740 Amo-Chr8 28776453 28782705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1740 54 272 NADPH P450 reductases AT5G17770 68.950 5.90e-120 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1740 K00326 - gmx:100809584 416.387