Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1717 ATGATTCTCCAGAAATCATCATCATCTATGGTGTTTAAAGTGAGGAGGAACCCAGCGGAGCTAGTGCCACCTGCTGGACCCACCCCCCATGAGCTCAAACTTCTCTCCGATATTGATGACCAAAAGGGTCTTCGTCACCACCTTCCATTGGTGCAATTCTTTCCTTACAACCCTTCAATGGCAGGGAAAGACCCTGCCCATGTAATCAGGGAAGCGTTGTCCAAAGCACTTGTGTTCTATTATCCACTTGCTGGGAGGCTTAGGGAAGGTCCTAAGGACAAACTTATGGTGGATTGCACCGGTGAAGGTGTATTGTTCATCCAAGCTGAAGCAGATGTTACACTTGACCATTTTGGTGTTGATCTTCTTCCTCCATTCCCTTGCTTTCATGAGCTCCTCTATGATGTTCCATTTTCTAATGATGGAATTATTAACTCTCCGCTCCTCCTTATGCAGGTGACACGTCTCAAATGTGGCGGCTTCATCTTTGCTATACGTGTGAATCACAGACTGTGTGATGGATGTGGAATTGGTCAGTTGATAAAGGGCATATCAGAAATAGCCCAAGGTGCAGCAAAGCCTTCAATTATCCCAGTGTGGTGTAGGGAGCTTCTTTGTGCAAGGGACCCACCAAGAGTCACATTCATCCACCATGAATACAAACAACTACCACTTCACAACAAAACTGTCTCCACAAAACCCTCCCAAGCTTCCTTCTTCTTTGGCCCCAACGAGATTGATGCATTGCGCTGCCTCCTCCCTCGTCATCTTGCTCAATCTTCCACCACTTTCGAAGTTCTCACTGCATGCATATGGCGCTGTCATACAGCTGCACTGCAATGGCAAAACCCTAACCAAGAGGTTCGCTTGCTTTGCACAGTGAATGCACGTTTTGAACCTTGCAGGTTTAGTCCTCCACTGCCTGAAGGGTATTACGGCAACGCTTTTGTGCTTCCTACGGCAGTTTCCACTGTGGAGACGCTATGCGGAAAACCCTTGAACTATGCATTGGAGTTGGTGAAGAAAGCAAAGAAAGAAGCATCTGAGGAATATGTGCACTCCACTGCAGATCTAATGGCTACTAATGGAAGGCCTGCATTTTCCATGACAGGATCCTTTATAGTGTCAGACATCACAAAATGTGGGTTTGGAGATGTGGATTATGGATGGGGTAAACCTTTGTATTCTGGATTAGTTAGAGCCGGTATAGATGATATTTCTGGTGTGAGCTACTATGTTCCATATACTAACTCTAAAGAAGAGCATGGTAGAGTTGTTTTAATTTGCCTGCCATCTGAAGAAGCCATCAAAAGATTTGGAAAAGAGCTTAACGGAATACTTCAGATCAAGGATGAAGAGAAACCTATCTAG 1371 0.453 MILQKSSSSMVFKVRRNPAELVPPAGPTPHELKLLSDIDDQKGLRHHLPLVQFFPYNPSMAGKDPAHVIREALSKALVFYYPLAGRLREGPKDKLMVDCTGEGVLFIQAEADVTLDHFGVDLLPPFPCFHELLYDVPFSNDGIINSPLLLMQVTRLKCGGFIFAIRVNHRLCDGCGIGQLIKGISEIAQGAAKPSIIPVWCRELLCARDPPRVTFIHHEYKQLPLHNKTVSTKPSQASFFFGPNEIDALRCLLPRHLAQSSTTFEVLTACIWRCHTAALQWQNPNQEVRLLCTVNARFEPCRFSPPLPEGYYGNAFVLPTAVSTVETLCGKPLNYALELVKKAKKEASEEYVHSTADLMATNGRPAFSMTGSFIVSDITKCGFGDVDYGWGKPLYSGLVRAGIDDISGVSYYVPYTNSKEEHGRVVLICLPSEEAIKRFGKELNGILQIKDEEKPI* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1717 456 Gene3D - 219 441 IPR023213 -
Amo08g1717 456 Pfam Transferase family 14 434 - -
Amo08g1717 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 448 - -
Amo08g1717 456 Gene3D - 8 218 IPR023213 -
Amo08g1717 456 PANTHER ALCOHOL ACYLTRANSFERASE 12 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1717 Amo-Chr8 28426437 28433285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1717 13 443 Monolignol Biosynthesis Gene Families AT5G48930 30.201 9.91e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1717 K19861 K13610 gmx:100795237 625.935