Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo08g1696 | ATGGCTGACCCACCTCCACCCAAGCGCCATAAAATTGTCAGAGGAGATGATGATTATATGCCCGGAAACATTCTTGAGATTGAGCTTTCTAAGTTTATGACCTTTGATCACGTGAAATGCAAACCTGGGCCTCGATTGAATCTTGTAGTTGGACCCAATGGTTCTGGAAAAAGTTCTCTCGTGTGTGCTATTGCACTTGGCCTTTGTGGAGAGCCTCCGTTGCTTGGGCGAGCAACTAGTGTCGGGGCATATGTGAAGCGGGGAGAGGAGTCTGGATCCATTAAGATTACATTGAGAGGGAATAACAAAGATGAGTGTATTGCCATTACTCGCAAAATAAATACTAACAACAAGTCTGAGTGGTTGTTAAATGGGAATATAGTTCCCAAAAGTAATGTAGCTGAAACTGTTAAAAGGTTTAACATCCAAGTCAGTAACTTGACTCAATTTTTACCGCAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCAGTGCAGCTCCTGGAAGAAACTGAAAAGGCTGTAGGTGATCCACAACTTCCCGAGCAACATCGTGCACTAGTTCATAAAAGTTATGCATTGAAGAATATTGAAGTGTCTAAGGAGGGGCATTTAGGTACCTTGAATCTGTTGAAGAAACAAAATGCTGAACTAGAGAAGGATGTTGAGCGTGTCCGTCTAAGAGATGAGATTCTTGCCAAGGCTGAAACCATGAAAAAGAAATTGCATTGGCTTGAATATGACATGAAGAAGGCTCAATATTGGGAAGCTAAGCAACATGAGAATAATGCGGCAAAGGCAATGGAGGAGTCTGCAAAGTTACTAAATGATCTTAAGGATCCTATTAACAAACAGAAGGAGGAACAGACTGCACTAGATGCCAAATGGAAAAAGGTTGACAGCCGTATAAAAGAGAACTACAAGAAGCGGTCAGAACTTCTAGATAAAGAGAGCCAACTGGATGTGGAGATGCAAAGGAATTACAAGGATATGGAAGATTTGAGAAGACAGGAGGAAACTTGGCAAAAAAAACTTGAAAAAATTAGGGAGGAACTTGCTGCTTCTGAACTTGAACTTGAGAATCTAGGTCCTTCCGAACCTCGTCAACAAGAAGAGCTGCAAAGACTAAGAGCTAAAGCCTCTGATATCGATTATGAAGCTAAGCAAGTGATGAATCCTCGCATATCACAACTAGAGAGGGAAATAAGTCATAAAGTGACATCCTTGAATGAATGTAAAAAAAGTTTGAGCGAAATGAACAATAAAATTACAAAATGTTTGCATGTATTGCAAAAAGCAGGGGCAGACAAAATTTTTGAAGCCTTTAAATGGGTCCAAGAACATCGTAAAATCTTCAATAAGGGGGTTTATGGCCCAGTATTATTAGAGGTGAATGTCTCAAATCAAGATCATGCTGCTTATCTAGAGGGTCAAGCTGCGCAATATATTTGGAAGTCTTTCATAACACAAGATCCTCGTGATCGGGACCTCTTGGTGCAGCACCTAAAGTTCTTTGATGTTCCAGTTTTAAATTATACCGGTGAAGTTGACCAACAAAGAGAGACTTTCAGAATTACTGAAGATATGCATGCCCTTGGCATTCACTCCCGGCTGGACCAAGTTTTTGATGCTCCTAGTGCTGTCAAGGAGTATATTGGATCCAGAGATACTGATAAGAGGGCTGACGAGGTTCCAAAATTGGGAATTATAAATTTGTGGACACCGGAAAATCACTACCGGTGGTCTAAGTCTAGATATGGGGGTCATATCTCAGCCATGGTCGAACAAGTGGGAGATCCGAAGTTTATAGTGAATAGTTCAAATGCGGGAGAAATTGAGAAGCTGGAATCCCGGGAAAAGGATCTTGAAGGAATTATTGCTACCTTGGAGGAAGATGCTAAAAGATCTCGAGATAAGCAAAAGGCCTTAATTAATGAATATGCTGATCTTCGTAGAAAGATGGAGGAGATTAATAAATTATTTCAACTAGAGAAACAAAAACGTGAAGGTATTCACAACCGTATTGGGAAAAAGAGAGCTGCACTGAAATCATTGGAGGAACCCATTGATAGAGATACTGAGATGGCAAAGCTTGTTGATCAGGCAAATAAACTTCACATTCTGAGATTCCGTAATGCAATGAAATTAAAGCAACTTCTCGTTGAGTGTGTTGCTTACAGAAGAAGCTTTATTGAACAACGGATGTCTTCGATTCAATTTGATGCTAAGATTCGAAAATTGGAGGCAGATTTAAAGCAGCATGAGAGGTCTGCCATTGAAGCAACTATACAATTTCAGAACCTTAAGAAAGAGACTGAGGCTTGTGAACGGCAGCTGACGGATTCTTTGAATCAAGCTGAATCAATTGCACCATTGACACCTGAGCTACAGAACGAATTTCGTGAGATGCCCACTACAATTGAGGATTTAAGTAATGCTATTCAAGAAACAATCTCTGAGGCCCGGGCAATATTTACACTTAATAATAATGCATTGGAGGAGTATGAGTATCGGCGACAAAAGGTACTTGTTCTGTTCTTGCACTTAGCTTTGCAGTATGTTGATGTGCCAAGTGAAGTCACAGATTATTTTCAGATAGAAGAACTTGCAGAGAAAATTGCTGCAGAGGAGGAAGAATATGGAAGGTCTTCTACTGAAATAAAGGAAATTGAGGATAAATGGCTTCCAGCACTTCGAAACCTTGTGGCACTGATCAATGAAACTTTTAGCCGTAATTTTCAAGAGATGGCTGTTGCTGGTGAAGTTTCACTAGATGAGCATGATAAGGAGTATGCCCAATATGGAATTTGTATTAAAGTCAAATTCAGACAAAATGGAAAACTTGAAGTTCTTAGTGCTCATCATCAATCTGGAGGGGAGCGGTCAGTTTCAACTATCGTATATCTTCTTTCCCTTCAAGATCTTACTAATGTCCCATTTAGAGTTGTTGATGAAATCAACCAGGGCATGGACCCAATAAACGAAAGAAAGATGTTCCAGCAACTGGTCAGAGCTGCAAGCAAGCCCAATACACCACAGTGTTTCTTGCTTACCCCCAAATTGCTACCAGACCTGCAATATAGTGAAGCATGCACTATATTGAACTATGGGAGGAAGGTGAAAGATGGAGTATTGTCACCGGTCTCTTGGGGGAAACCCATTGTTGAAGTAAAACTCAATGTAACTAAATACACTGCATTTGAATGGTCCATTTTTTTGAATTTTGCCAATAATCTCGTTTTCTCTTTGGTCTGCTCCCTCCTCTTCCCCAATATCTGCCTGCATTCTCTCCAGCTCTTCCTTTATTTCCCTGATAAACTAACCAGCACTACTGAATTATTGATTTTCTTCGCAAGAAGCCCTCCTGATATGCTGTGTTTGGACGAGGTATGGGCAGATATTCCAAAGTTCTCTGTACACCATCAATCATTCTTCGGAAGAAACATGATTGGAATTTATGTTCATAGGAAGTTTAGAATGGTTTATCTTCCATGGATAGATACATACACACCTAGTAGAACGAAAAAAATTTATTACATTTTCCCCTTTCTAATTGAAATATAG | 3564 | 0.401 | MADPPPPKRHKIVRGDDDYMPGNILEIELSKFMTFDHVKCKPGPRLNLVVGPNGSGKSSLVCAIALGLCGEPPLLGRATSVGAYVKRGEESGSIKITLRGNNKDECIAITRKINTNNKSEWLLNGNIVPKSNVAETVKRFNIQVSNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRALVHKSYALKNIEVSKEGHLGTLNLLKKQNAELEKDVERVRLRDEILAKAETMKKKLHWLEYDMKKAQYWEAKQHENNAAKAMEESAKLLNDLKDPINKQKEEQTALDAKWKKVDSRIKENYKKRSELLDKESQLDVEMQRNYKDMEDLRRQEETWQKKLEKIREELAASELELENLGPSEPRQQEELQRLRAKASDIDYEAKQVMNPRISQLEREISHKVTSLNECKKSLSEMNNKITKCLHVLQKAGADKIFEAFKWVQEHRKIFNKGVYGPVLLEVNVSNQDHAAYLEGQAAQYIWKSFITQDPRDRDLLVQHLKFFDVPVLNYTGEVDQQRETFRITEDMHALGIHSRLDQVFDAPSAVKEYIGSRDTDKRADEVPKLGIINLWTPENHYRWSKSRYGGHISAMVEQVGDPKFIVNSSNAGEIEKLESREKDLEGIIATLEEDAKRSRDKQKALINEYADLRRKMEEINKLFQLEKQKREGIHNRIGKKRAALKSLEEPIDRDTEMAKLVDQANKLHILRFRNAMKLKQLLVECVAYRRSFIEQRMSSIQFDAKIRKLEADLKQHERSAIEATIQFQNLKKETEACERQLTDSLNQAESIAPLTPELQNEFREMPTTIEDLSNAIQETISEARAIFTLNNNALEEYEYRRQKVLVLFLHLALQYVDVPSEVTDYFQIEELAEKIAAEEEEYGRSSTEIKEIEDKWLPALRNLVALINETFSRNFQEMAVAGEVSLDEHDKEYAQYGICIKVKFRQNGKLEVLSAHHQSGGERSVSTIVYLLSLQDLTNVPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACTILNYGRKVKDGVLSPVSWGKPIVEVKLNVTKYTAFEWSIFLNFANNLVFSLVCSLLFPNICLHSLQLFLYFPDKLTSTTELLIFFARSPPDMLCLDEVWADIPKFSVHHQSFFGRNMIGIYVHRKFRMVYLPWIDTYTPSRTKKIYYIFPFLIEI* | 1188 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo08g1696 | 1187 | Pfam | RecF/RecN/SMC N terminal domain | 24 | 1008 | IPR003395 | - | |
| Amo08g1696 | 1187 | Gene3D | - | 865 | 1026 | IPR027417 | - | |
| Amo08g1696 | 1187 | Coils | Coil | 201 | 228 | - | - | |
| Amo08g1696 | 1187 | Coils | Coil | 737 | 785 | - | - | |
| Amo08g1696 | 1187 | Coils | Coil | 866 | 893 | - | - | |
| Amo08g1696 | 1187 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 725 | 1042 | IPR027417 | - | |
| Amo08g1696 | 1187 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 24 | 1017 | IPR027417 | - | |
| Amo08g1696 | 1187 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 | 18 | 1035 | IPR027131 | GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915 | |
| Amo08g1696 | 1187 | Coils | Coil | 257 | 277 | - | - | |
| Amo08g1696 | 1187 | Coils | Coil | 612 | 667 | - | - |
Showing 1 to 10 of 14 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo08g1696 | K22803 | - | gmx:100778678 | 1352.42 |
Showing 1 to 1 of 1 entries