Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1682 ATGTATATGAAAACGGAGATTGAGGAAGAAAGAAGAAGGAAGCTAAGGATGGCAACTATTGTATCCATTCTAAAACAATTCCCATGTGATAAGTTTAACTCAACCCTCTACCTTTCAATAGTAGTTGCCATCATTATTAGCATCATTATTGTGATTAATCTAACCATCACAAGAAGAAGCAAATCCATTATTAATCTTCCACCATCACCACCAAAGTTACCATTCATTGGAAACCTTCACCAACTAGGAACATTGCCACACCGTTCTTTCCAAGAACTCTCCAACAAGCATGGCCCTCTCATGTTCCTTCAGTTAGGGCAAATCCCAACATTAGTGGTTTCATCTGCAGATTTGGCCAAGGAAATCTTCAAAAACCATGATCTTGTTTTTGCGAGCCGCCCTCCAACGACGGCCGGAAATATCTTTCTCTATGGCTGCAAAGACATAGCGTTTGCGCCCTGCGACGAAGCATGGAGACAGAAAAAAAAAGTTTGTGTTGTTAAACTTCTAAGTCCCAAAAAAGTTAAATCGTTTCTCCCTGTAAGACAACATGAGGTTGCAAAACTTGTTGATACCATCCAAGAAGCGTGCTCAAGAGAAGTCTCATCATCATCTTGTGTGATTAATCTTAGTGAGTTGTTGGTTGCTACATCGTTCAACATCGTTTCAAGATGTGTTCTTGGACAAGACTTTGATTTCTCAGAAGTTAGTGGTCATGGAAGCTTTGGAGAGCTTGGCAGGAAGTTGCTGAGGCAATTCACTGAGTTTTGTGTTGGTGATTTCTTCCCTTCATTGGGTTGGGTTGATGCTGTTAGAGGCTTGACTTCCAAGTTTAATGCCACTTCTGTAGCAGTAGATGCTTTCATGGAAGGAGTAATTGAAGAACACAAGAAAAATAAGACGAACAATGATGATGATGATAGTAACAAAGACTTTGTGGCTATACTTCTTCATCTTCAAGAGAAGGGTACGCTTGAATTTGAGTTCACTAGAGAAGATCTCAAAGCAATCCTAGTGGACATGTTTCTTGGAGCAACTGATTCTAGCTCCATCACTTTAGAGTGGACTTTCTCTGAGCTCCTTAAGAAGCCAAGTACCATGAAGAAAGTTCAAGAAGAGGTAAGACAAGTTGTGGGGAACAAATCAATGATAGATGAAAATGACATAAATCAAATGAAGTATTTGAAGTGTGTGATCAAAGAAGCTCTTAGGCTACACCCACCTCTTCCTATCTTAGTCCCTAGACAAACAACATCAAATTCAAAAATAAAAGGGTATGACATTCCTTCAAAAACAACTGTTTATTTGAATGTTTGGGCAATTCATAGGGACCCTGAATTATGGAAGGATCCTGAAGAATTCATTCCAGAAAGATTTGAAAGTAACCAAATTGATTTCAAAGGACAAGATTTTCAATATATCCCTTTTGGATCCGGAAGAAGGGGTTGTCCTGGAATGTCATTTGGACTTGCTTCTACGGAATATATTCTTGCTAATCTTTTATATTGGTTTGATTGGAAGCTGCCTATAAATGAAGACATAGACATGACTGAAATGTCTGGAATCAGTGTTAGCAAGAAAGTACCACTTCATCTTGAAGCCATAATGATGGACAATTAG 1620 0.3883 MYMKTEIEEERRRKLRMATIVSILKQFPCDKFNSTLYLSIVVAIIISIIIVINLTITRRSKSIINLPPSPPKLPFIGNLHQLGTLPHRSFQELSNKHGPLMFLQLGQIPTLVVSSADLAKEIFKNHDLVFASRPPTTAGNIFLYGCKDIAFAPCDEAWRQKKKVCVVKLLSPKKVKSFLPVRQHEVAKLVDTIQEACSREVSSSSCVINLSELLVATSFNIVSRCVLGQDFDFSEVSGHGSFGELGRKLLRQFTEFCVGDFFPSLGWVDAVRGLTSKFNATSVAVDAFMEGVIEEHKKNKTNNDDDDSNKDFVAILLHLQEKGTLEFEFTREDLKAILVDMFLGATDSSSITLEWTFSELLKKPSTMKKVQEEVRQVVGNKSMIDENDINQMKYLKCVIKEALRLHPPLPILVPRQTTSNSKIKGYDIPSKTTVYLNVWAIHRDPELWKDPEEFIPERFESNQIDFKGQDFQYIPFGSGRRGCPGMSFGLASTEYILANLLYWFDWKLPINEDIDMTEMSGISVSKKVPLHLEAIMMDN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1682 539 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 34 534 - -
Amo08g1682 539 SUPERFAMILY Cytochrome P450 67 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 Pfam Cytochrome P450 67 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 Gene3D Cytochrome P450 52 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Amo08g1682 539 PANTHER CYTOCHROME P450 71B11-RELATED 34 534 - -
Amo08g1682 539 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS E-class P450 group I signature 118 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS E-class P450 group I signature 437 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g1682 539 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1682 Amo-Chr8 27872395 27874644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1682 65 531 Cytochrome P450 AT3G48310 43.312 8.45e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1682 K20617 - gmx:100792382 600.512