Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1676 ATGGCTTTTGGTTTTCAAGTTTCAACCACTCAATGTGGAGCGAAGCTAGGGACTCTCATATTTGAAGTTGGCAAAAACTTTATGGTATACATTGGTATGATCATCTTATGTAGTGGTTTACATTTTCTACTAAAGCTTTATTCACAACCCCGAATTACTTCTCAGATAATTGTAGGATTAATTTTGGGAAACATAGGATTCATACGTAATTTACTTACAAAATTTCACAGGACCTTCGGATTCATAATTGATTTTGGTATGATGTGTTACATGTTTGTATTGGGGATAGAAATGGATCCTTTTATACTGTTTAAAAGACCTTCTAGATATGCTCAAGTTGCTTATGGTGGCATACTCTCAACATTTATTATAGGATTGTTGATAACTCCAATTACTGGATATTTTCTACACCAACCTAGATTATTAGAATTCACCATCTATCTATGCACACTTCTTTCAAGCTCTGCCTCTCCTGTGTTAACCCGTTTGATAACTCATCTAAAAATAGGAAAGTCAGATATTGGACAACTTGTCATTGGAGCAGGGATGCATTCGGATTTTGTGTGTTCTTTACTCCTTTGTATTGGCTACATTATTTCGCCAATTCCTTTGTACTGTGAAGCTTTGAGAAATGAGCATGCTTTAGAAAATCATAAGAAGATAATTAAGACTCAAATTATCATGGGTTTGGTAGTTTTGGGTCAGATGATGGTTGTATCCCTACTATCACCATTATTTATGAACTGGGTTAATAATGAAAACCCAGAAGGTAAACCCATGAAAGGGTCACACTTGGTGCTATCCCTTGCTTTCATGGTTCTAATGTGTGCTACCTCCCCTTTGTATGGTTATCATCCAATTTTAAGTGCTTTTGTGACAGGGATTTGCTTACCAAGAGAGGGTAGACTATCAAAATGGGTTATAACCAGAGTAAACTATTTATTAACCATCATATTCCATCCTATCTTTTTCTTGTGGATGGGATATGAAGCCGATTTTCGCAAGTCTGAGCCTTCGAATATAGGAACATGGATAAAATTCTTTGTACTACTAATTGTAAGCATGACTGGAAAAATTGTTGGAACCATAATTTCTGGAGCAATGCTTGGCTTTCATTGGCCTGATTCGGTTGCAATAGGATTGCTCCTTACTATGAAAGGCCATCCTCATATCTATCTAGCTATCAAAGGAAAAACTTGTGATGTAACTATTTCTACATGCATTGGGATGATAATTGCAAGCTTTGTGACAATTGTGCAAGCCCCATATGTTGTAGCAAATATAATCAAGAGAGCAAGAAAACGGACACGTACTCATCAGATGGCTCTTCAACTTCTTGATCAGTCAAATGAGCTAAGGATTCTCCTGTTCGTTCATGGACCACACAACATTCCTGCATCCATCAACTTCATGGAGATCTCACGTGGCAACACAGACCCTGGCATTCTAATCTACGTTGCTGACATGATTGAACTTACTGATGAACTTTCGGCCACATTAGAAAGGGATGAAGGGGTTCATATGGCAACTATTAAAGATAAGAAAGTCATGGACATGAGGGACCAAGTGACCAATTCTTTTCAAAGCTATGTAGCCATTGATGGCGATGGAGTTACACTGAAAAGAACTCTGGCACTCTCAACCATCAATAACATGCCGCAAGACATATGTGTTTTAGCAGAAGACTTGATGATTTCTCTTCTCGTACTTCCATTCCATAGGATCCAACGTCAAGATGGAACATTGGATGCTGGTAATCAAGGTTTCAGATATGTCAATAGAAAGGTACTAAGAAGTGCCCCTTGTTCTGTTGGAATTCTTGTTGATAGAGGCCTTGGAAATATTGAACGAATATCAAGATCTGAAGTAACAATAAATGTGGCAGTTATATTCATTGGAGGAAAAGATGATAGGGAAGCACTCGCTTATGCTAGTCGTGTGTCACAACATCCAGGAGTCAAACTTACAGTAATAAGATTACTAGTAGATACTAATGCTGAGTCTTCTAGATTAGTAGGATATATGGTGGTTAATCCAGAGCAAGAGCAAGAGAGACAAGTAGATGATGAGTATTTTGCACAATTTTATGAAAATCATGTAGTTGGAGGTCACATTTTGTATACGGAGAAGCATCTAGCAAATGCTGCCGAGACCTTTTCTACTCTAAGATCATTAGAAGGATTGTATTCATTGGTGATTGTGGGAAGAGAAGGTGGAGTAAACTCTATATTGACAAGAGGGATGAACGACTGGCAACAGTGTCCAGAATTGGGACCAATAGGAGATGTTTTGTCGGGACCTGATTTCTCCACAACTATGTCTGTGTTGATCATTCAACAACATAGACTTAAAGGAGAATTAGATGGATTGGATGAGGACTTCTCTATCATGTAG 2394 0.3797 MAFGFQVSTTQCGAKLGTLIFEVGKNFMVYIGMIILCSGLHFLLKLYSQPRITSQIIVGLILGNIGFIRNLLTKFHRTFGFIIDFGMMCYMFVLGIEMDPFILFKRPSRYAQVAYGGILSTFIIGLLITPITGYFLHQPRLLEFTIYLCTLLSSSASPVLTRLITHLKIGKSDIGQLVIGAGMHSDFVCSLLLCIGYIISPIPLYCEALRNEHALENHKKIIKTQIIMGLVVLGQMMVVSLLSPLFMNWVNNENPEGKPMKGSHLVLSLAFMVLMCATSPLYGYHPILSAFVTGICLPREGRLSKWVITRVNYLLTIIFHPIFFLWMGYEADFRKSEPSNIGTWIKFFVLLIVSMTGKIVGTIISGAMLGFHWPDSVAIGLLLTMKGHPHIYLAIKGKTCDVTISTCIGMIIASFVTIVQAPYVVANIIKRARKRTRTHQMALQLLDQSNELRILLFVHGPHNIPASINFMEISRGNTDPGILIYVADMIELTDELSATLERDEGVHMATIKDKKVMDMRDQVTNSFQSYVAIDGDGVTLKRTLALSTINNMPQDICVLAEDLMISLLVLPFHRIQRQDGTLDAGNQGFRYVNRKVLRSAPCSVGILVDRGLGNIERISRSEVTINVAVIFIGGKDDREALAYASRVSQHPGVKLTVIRLLVDTNAESSRLVGYMVVNPEQEQERQVDDEYFAQFYENHVVGGHILYTEKHLANAAETFSTLRSLEGLYSLVIVGREGGVNSILTRGMNDWQQCPELGPIGDVLSGPDFSTTMSVLIIQQHRLKGELDGLDEDFSIM* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1676 797 PANTHER CATION/H+ EXCHANGER 3 11 795 - -
Amo08g1676 797 Gene3D - 25 439 IPR038770 -
Amo08g1676 797 Pfam Sodium/hydrogen exchanger family 29 418 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo08g1676 797 PANTHER CATION/H + ANTIPORTER 11 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1676 Amo-Chr8 27807536 27810517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1676 22 797 Antiporter Super Family AT3G52080 46.650 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1676 - - cam:101501359 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2909 18 124106721 124112376 Amo08g1676 08 27807536 27810517 hybridization
Amo13g1550 13 21032341 21035688 Amo08g1676 08 27807536 27810517 PCT