Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1657 ATGCACGACAGCGACCGTTACGAACTGGTCCGTGACATCGGGTCCGGAAACTTCGGCATCGCAAGATTGATGCAGGATAAGCAGACCAAGGAGCTCGTTGCTGTTAAGTACATCGAACGCGGCGACAAGATTGATGAACATGTCAAGAGAGAAATCATTAATCACAGGTCTTTGAGACACCCTAACATTGTTAGGTTTAAGGAGGTTATTCTAACACCTACGCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAACTGTTTGAGCGAATCTGCAATGCTGGGCGTTTCTCTGAGGATGAGGCTCGTTTCTTCTTTCAACAATTCATATGTGGGGTCAGCTACTGCCATGCAATGCAAGTTTGTCACCGGGACCTGAAGTTGGAGAACACTTTGCTGGATGGAAGCCCAGCACCACGTTTGAAGATATGTGATTTTGGCTACTCCAAGTCAGTAGCGACTCATCTCTCCTCTCTTCTCTGA 486 0.4712 MHDSDRYELVRDIGSGNFGIARLMQDKQTKELVAVKYIERGDKIDEHVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQFICGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSVATHLSSLL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1657 161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Amo08g1657 161 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2I 4 156 - -
Amo08g1657 161 PANTHER SERINE/THREONINE KINASE 4 156 - -
Amo08g1657 161 Gene3D Transferase(Phosphotransferase) domain 1 85 160 - -
Amo08g1657 161 SUPERFAMILY Protein kinase-like (PK-like) 4 155 IPR011009 -
Amo08g1657 161 SMART serkin_6 7 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1657 161 ProSitePatterns Protein kinases ATP-binding region signature. 13 36 IPR017441 GO:0005524
Amo08g1657 161 ProSiteProfiles Protein kinase domain profile. 7 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1657 161 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Amo08g1657 161 Pfam Protein kinase domain 7 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1657 Amo-Chr8 27402801 27405724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1657 6 150 CBL-interacting serine-threonine protein kinases AT2G26980 44.966 6.94e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Amo08g1657 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1657 K14498 - gmx:100806949 303.138