Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1632 ATGGCTGACATAGCAGGTTTACTTGAGGCAGCAGGATCAAGGTTCAGTGCATTGGAGCTTATTGGGCAGGGATCATTTGGTGATGTCTATAAAGGGTTTGACAGAGAGCTTAACAAAGAAGTTGCTATCAAAGTAATTGATTTGGAAGAATCGGAGGATGAAATTGATGATATTCAGAAGGAAATTTCTGTTCTGTCACAATGCCGATCTCCATACATCACTGAGTACTATGGTTCCTATCTCAATCAAACTAAACTCTGGATAATAATGGAATACATGGCTGGCGGCTCTGTCGCTGATCTACTTCAATCCGGTCCTCCACTGGATGAAACATCCATTGCTTGCATTCTACGTGACTTGCTACATGCAATTGATTACCTACACACTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACCGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGCTCACGAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCTTTCTGGATGGCACCAGAGGTTATTCAGAATTCCGAAGGATATAATGAGAAGGCAGATATCTGGTCTATGGGGATCACTGCAATTGAGATGGCAAAAGGGGAGCCTCCACTTGCCGATCTTCATCCCATGAGAGTGCTTTTTATCATACCTCGAGAGAATCCTCCGCAGTTAGATGAGCATTTTTCTCGTCCCCTGAAAGAGTTCGTTTCATTGTGTTTGAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAACACCGTCTTATTCGGAATGCTAGGAAGAGTCCAAAGCTTGCAGAAAGAATAAGGGAGCGTCCAAAGTACCACATAAAGGATGATCCGGGGGCAGATGATCCGGGGACTGTTAAAAAAGTCCCAAGAGGGATGGGTGAGGCTTCTGATACTATGAAGGTGTCTAGAGATGTTAGAGCTGAAGAAACTAGTAGAACCAGTGGTCAGGGTCAAACTGTAAAAAGTGCTGGATGGGACTTCAACATTGGTGGTCACAAGGCACTGTTCGTAGCGGTACTGTTCGTAGTGTAG 1077 0.4373 MADIAGLLEAAGSRFSALELIGQGSFGDVYKGFDRELNKEVAIKVIDLEESEDEIDDIQKEISVLSQCRSPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDETSIACILRDLLHAIDYLHTEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSMGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPLKEFVSLCLKKVPAERPSAKELLKHRLIRNARKSPKLAERIRERPKYHIKDDPGADDPGTVKKVPRGMGEASDTMKVSRDVRAEETSRTSGQGQTVKSAGWDFNIGGHKALFVAVLFVV* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1632 358 MobiDBLite consensus disorder prediction 278 338 - -
Amo08g1632 358 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 346 - -
Amo08g1632 358 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1632 358 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1632 358 MobiDBLite consensus disorder prediction 278 298 - -
Amo08g1632 358 SUPERFAMILY Protein kinase-like (PK-like) 12 285 IPR011009 -
Amo08g1632 358 Pfam Protein kinase domain 16 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1632 358 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 346 - -
Amo08g1632 358 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Amo08g1632 358 CDD STKc_MST3_like 13 286 - -
Amo08g1632 358 Coils Coil 41 68 - -
Amo08g1632 358 Gene3D Transferase(Phosphotransferase) domain 1 12 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1632 Amo-Chr8 26938004 26943146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1632 1 350 MAP Kinase Kinase Kinase Kinase AT3G15220 80.000 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Amo08g1632 Pkinase 1.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1632 K08838 - gmx:100786501 605.134