Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1631 ATGGTGGGGTCAGGAGGTGGTGGTGGTGGAACAGGAGAGAGGAGCAAGGAGGCTGTTGGGATGATGGCACTTCATGAGGCACTCAGAACCGTCTGTCTTAACTCTGACTGGACCTACTCTGTCTTCTGGACCATCCGCCCACGCCCGAGAGTTAGAGGTGGCAATGGTTGCAAGGTTGGAGACGATAACGGCAGCCTGATGCTGATGTGGGAAGATGGGTTCTGCCGAGGAAGGAGTGCAAGTCTGGTGGAAGACATGGACGGAGGAGGAGAGGATCCAGTGAGAAAGGCCTTCAGCAAGATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTCAAAGAGCCCACAGAATGTGAGCCTAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACCGACCAGTTTGATTCTGGCATTCAGACTATTGCTGTAATTCAAGCTGGACATGGCCTTCTTCAGCTAGGCTCTTGCAAGATTATTCCGGAGGACCTCCATTTTGTGCTAAGAATGAGACACACATTTGAATCACTTGGCTACCAATCGGGATTCTACCTCTCACAACTCTTCTCTTCAACAAGGAACACTTCATCTTCAACTTCAATCCCTTCAAAACCATCTTCCATTCCAATTAGGCCTCCAGCACCACTCTTCAACTGGCCTCACAGGCCATCGCTTCCATCTTCGGCCGCCTCAATGCTCTCCTCGCCCAATTTTGCTGCATCCAGGATGGGATTCCCAAACAAGGACTCTGAGACACACATGTTTCTCATGCCACACCATCACCACCATCACCAAGAGCATGGTGCAAGGATTGAGGACATGATTGGAACTAACACTACTAGTGGTGATCATGAGAATGATATTAAGTGGCCTAATGGATTGTCCTTCTTCAATGCTTTAACCGGCCGAACCGACGAAGCTAACAAGCTATTGCAGGAACAAGCATTGAACATCACTCATCAGAACCCCAATTCGGATTCTTCAAACATGCAACAAAATGAGTTCCTCAGCTTGGAAACAGGACACCCTGAAGGTGGTTCTGCTGCTGCAAGGAAAATGGATAAGTTCAAGAGGAGCTTCACTTTACCTGCAAGAGTTGTTTCATCATCTTCATCAACTTCCATGGATCAACATCAACAACAAGGTAATGCTGTGGAGTATAGGAATTCAGATGGACCTATGTTCCCGGATGTTATGGAAACCTTTTTGGAGTGA 1275 0.4761 MVGSGGGGGGTGERSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRSASLVEDMDGGGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFDSGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSIPSKPSSIPIRPPAPLFNWPHRPSLPSSAASMLSSPNFAASRMGFPNKDSETHMFLMPHHHHHHQEHGARIEDMIGTNTTSGDHENDIKWPNGLSFFNALTGRTDEANKLLQEQALNITHQNPNSDSSNMQQNEFLSLETGHPEGGSAAARKMDKFKRSFTLPARVVSSSSSTSMDQHQQQGNAVEYRNSDGPMFPDVMETFLE* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1631 424 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 24 194 IPR025610 -
Amo08g1631 424 PANTHER GB|AAF34833.1 1 424 - -
Amo08g1631 424 MobiDBLite consensus disorder prediction 387 412 - -
Amo08g1631 424 MobiDBLite consensus disorder prediction 387 407 - -
Amo08g1631 424 PANTHER GB|AAF34833.1 1 424 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1631 Amo-Chr8 26873534 26876063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1631 25 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.034 1.74e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1631 - - aip:107614137 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1632 18 32513894 32516370 Amo08g1631 08 26873534 26876063 hybridization