Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1626 ATGGTCATGGAGCTTCTTGATCATCATGGTAGGCCTATAATAATCTGCCTCTTGTTGGTGATTGTGTTGTCAAGACCCTTACAAGGGTACAAATTCTATGTTGGTGGGAAAGATGGTTGGGTTCTGAATCCTTCTGAGAGTTACAACCAATGGGCGGAAAGGAACAGGTTCCAAGTCAGTGACACATTGGTGTTTAAGTACAAGGAGGGATCAGAGTCAGTGTTGGAGGTGAAGAAAGAAGACTATGAGAAATGCAACAAAAAGAAGGCAATAAAGAAACTAGAGGGGGGAGATAGTAGTGAGTTCCAATTTGATAGGTCAGGTCCATTCTACTTCATTAGTGGGAATGATGATAATTGTGAGAAAGGTCAGAAGCTTATTGTTGTGGTGTTAGCTCAAAGACCACCACCACCACCTCCTCAAAATACACCAAAATGTCCTCCTCCTTCACCAATTCATAATCCTCCCTATGTCACTCCACCACAAGCTCCTTCTCCCGGACATAACAATCATCATCCCAACCCTCCATATACCCCAATAGTCCCCCCAAAAACACCTTCACCAACTCCACCACAAGCTCCCTCCCCTGGCCATAACCCACCGTATATTACTCCAACACCACCACAAGCACCTTCCCCTGTTCCACCATATGTTACCCCAACTCCACCACAAGCTCCTTCTCCTGGACATAACAATCATCATCCCAACCCTCCATATACCCCAATAGTTCCTCCAAAAACACCTTCACCAGAAGCACCCTCCCCTGGCCATACTCCAATAGTTACTCCAACACCACCACAAGCTCCTTCCCCTGGCCATACTCCAATTATTCCACCATACGTTACTCCAACTCCACCGCAATCTGCTCCTTCCCCCGGCCATAACAATCATCACCCTAACCCTCCATACACTCCAATAGTTCCACCACAAGCCGCACCTTCCCCCGGCCATAACAATCATCATCCTAACCCTCCATACACTCCAATTGTTCCACCATCACCTGGTAACACTCCATATGTTCCAACACCAAGATCATCACCTTCTCCATATGTACCAACGCCAATTTCTCAACCACCTTATCATACTCCAACTCCACCACAGGCTCCTTCCCCTGCTCATAACAATCATCACCCTAATCCTCCATATGTTCCATCACCAATTTCTCAAGCTCCTTCCCCTGCTACCAACAACAACCATCACCCAAACCCACCATATGCTCCACCAAACCCTCCAAAAACACCATCACCGCTTTCTCAGCCTCCCTATAGTGCTGCTGCTCCAACGCCAACATCATCACAACCACCATACAATACTTCCCCTGTTTCGCAACCTCCCACCGGCACGGGAACTGCACCCATAGGCTCACCACAGTACTCTCCAACAGCGCCATCACCTTCAGTTTCAACTCCATCACCGGCGTCTGCTACGCCATCACCACCCTCACCGTCACCCTCCATTTCTCCATCCGCTGCGACTCCTCTCGCTTCCCCATCTTCCTCTCCAGGAGCAGCAACTCCTGCAGCCACGCCGGCGTCGTCTTCGAACGAAACGACACCAGCAACGCCAAACGGGAAACCTTCGTCGTCTGGATGGGCTGCAAATCCATCACCAGTTTCGGTTAATTCAGCCATCGCCATTTTCGTCGCTGCCGCACTAAGCACTATTATTGCCTAG 1674 0.4928 MVMELLDHHGRPIIICLLLVIVLSRPLQGYKFYVGGKDGWVLNPSESYNQWAERNRFQVSDTLVFKYKEGSESVLEVKKEDYEKCNKKKAIKKLEGGDSSEFQFDRSGPFYFISGNDDNCEKGQKLIVVVLAQRPPPPPPQNTPKCPPPSPIHNPPYVTPPQAPSPGHNNHHPNPPYTPIVPPKTPSPTPPQAPSPGHNPPYITPTPPQAPSPVPPYVTPTPPQAPSPGHNNHHPNPPYTPIVPPKTPSPEAPSPGHTPIVTPTPPQAPSPGHTPIIPPYVTPTPPQSAPSPGHNNHHPNPPYTPIVPPQAAPSPGHNNHHPNPPYTPIVPPSPGNTPYVPTPRSSPSPYVPTPISQPPYHTPTPPQAPSPAHNNHHPNPPYVPSPISQAPSPATNNNHHPNPPYAPPNPPKTPSPLSQPPYSAAAPTPTSSQPPYNTSPVSQPPTGTGTAPIGSPQYSPTAPSPSVSTPSPASATPSPPSPSPSISPSAATPLASPSSSPGAATPAATPASSSNETTPATPNGKPSSSGWAANPSPVSVNSAIAIFVAAALSTIIA* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1626 557 MobiDBLite consensus disorder prediction 133 536 - -
Amo08g1626 557 MobiDBLite consensus disorder prediction 133 312 - -
Amo08g1626 557 PRINTS Proline rich extensin signature 128 149 - -
Amo08g1626 557 PRINTS Proline rich extensin signature 149 165 - -
Amo08g1626 557 PRINTS Proline rich extensin signature 178 195 - -
Amo08g1626 557 PRINTS Proline rich extensin signature 196 221 - -
Amo08g1626 557 ProSiteProfiles Phytocyanin domain profile. 30 132 IPR003245 GO:0009055
Amo08g1626 557 MobiDBLite consensus disorder prediction 463 487 - -
Amo08g1626 557 PANTHER BLUE COPPER PROTEIN 15 363 IPR039391 GO:0009055
Amo08g1626 557 MobiDBLite consensus disorder prediction 397 423 - -
Amo08g1626 557 MobiDBLite consensus disorder prediction 318 388 - -
Amo08g1626 557 PANTHER EARLY NODULIN-LIKE PROTEIN 2 15 363 - -
Amo08g1626 557 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Amo08g1626 557 CDD OsENODL1_like 30 131 IPR041846 -
Amo08g1626 557 Gene3D - 29 134 IPR008972 -
Amo08g1626 557 MobiDBLite consensus disorder prediction 488 536 - -
Amo08g1626 557 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Amo08g1626 557 MobiDBLite consensus disorder prediction 424 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1626 Amo-Chr8 26731088 26733307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1626 15 144 Phytocyanin Superfamily AT5G53870 51.852 1.05e-46 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1626 - - aip:107613132 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1621 18 31829814 31831936 Amo08g1626 08 26731088 26733307 hybridization