Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1593 ATGCGATTGTCTTCTAAATCTGGTTCTTCATCTAAGCATAAGAATGTTGGTAAATCTAGTCCGTGGCTTCGGAAGAAGCACAAGAGGTTAGACGCGATATGTGAGAAGGAGTACAATCGGAACCATGGTGATTCCAATGGGTGTGATGATRMTTTGATTACTGATGCTGCGGATTCAGCGGTTCGCCGAAGCTCCCGTGTTCGGCGTGCCCCGGTTCTGCTGGATGCCTCTCCTGCTCCTCCCAAGAAACGGCGGAAGTTAGGGAAGGTTGGAGTGCCTGCAGGGCGCATAGAGAGTGGCAAGAAGAATTTGGAGCAGCAGAGTCCCGGCAGCAGCATTGAGGGGAGTCCTTCGGCTTGGAGATCGAGGTTGMGGTCTAGGGCTAGGGGTGCAGGTTTTGAGGTCAATGATGAGAAGGAATTGCCCCGTCGGAAGAGGAAGCTTTTTGAGGATGTGGTTGTAAGTAGGGGTGATGATGAATTGAAGGTTGATAAGAAGAAGGAATTGGAAGGTGGAGTGCCAAGGATTGTTAAGTCGAAGAGACCAGCGAGGATCAAAGCTACAAAGCATGAAGAAGAGCTTAAAGTGAATGAGTCTCATGAAGTAGGGCCTAAGGAGAACGAATCTCATGAAGAGGGGCTGAGAGAGAATGAATCTCACAAGGAAACGCTTAGAGAGAATGAATCTCATGAGGAAGGGCTTCAAGAGAATGAATCTTTTGTAGCAAAGCAGACAGAGAAGGAGTCTTATGAAGGGCATAGAGAGAATGAGTGTCATGGTAATTTAGATGAGAGCAACAGTCAAGAAGTGGAGCTTACAGTGAACAAAGAGGAGGGTAATGATACGGTTCCAGTAACTGATGTGTCTGGCGGGAACCTTGTAATTATATTGGATGTGAATGGCCCTCCTATTATAGGGAATGGGGAGAGAAACATGTCAAGCAATTTGCAAACGGAGGAATGTAGTGACGGTAGTGAACAGTCTCCTTTGGAACATGCAGATGAACAGGATGATCGATGGGAACATGCAAATAAACAGGACGATCAGTTAGCATGTGAGAAGGAAGGCAATAATGCAAGTGAAGGAGCTGAAATTGCTGGGAGTTCAACAAAGCAAGTAGAAAATGAAGGATCAGCTGACAAGGAGGCTGAGATTGGTGAAAACACTTTGAAAGATGCAAACTATGTGACAAAGGATAAGCTGAAACAAGCTTCAAATGGCTCCCAACGGATCAAAGAGGGTCGACGGTGTGGATTGTGCGGGGGAGGCACTGATGGTAAGCCTCCAAAAAGGTTGCTTCAGGACAATGGTGAGAGTGAGAATGAAGCATATAGCGGTTCTTCGGCTTCAGAAGAGCCTAACTTTGATATCTGGGATGGTTTCAGTGATGAACCTGGCTGGCTTGGTCATCTCTTGGGTCCTATTAATGATAACTTCGGCATTGCTCGAATATGGGTTCATCAGCAATGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGGTTGGGATGCTTGAAGAATGTCAGGGCTGCACTTTACAGAGGAAGAGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCAACCTCAGGTTGTCGTGTTGATCGTTGTCCAAAAACTTATCACTTGCCTTGTGCAAGAGCAAGTGGTTGCATCTTTGATCACCGTAAATTTCTTATTGCCTGCACAGATCATCGGCATCTTTTCCAACCACATGGTAATAAATATTTAGCCCGGATAAAGAAGTTGAAAGCTAGGAAACTGAAGTGGGATATGAGGAAGCATTCAAATGATGCTTGGAGAAAGGATATTGCTGCAGAAGAGAGATGGCTTGAAAATTGTGGAGAGGATGAGGAGTTTTTGAAACGTGAGAACAAGAGACTTCATCGTGATTTATTGAGAATAGCACCAGTGTACATCGGTGGTTCAGACTCTGCATGTGAACCATCCTTTCAGGGATGGGAATCTGTTGCTGGACTTAAAGATGTCATCCAGTGTATGAAGGAAGTTGTTATTTTGCCTCTACTATATCCTGAGCTCTTTGATAATTTAGGGCTTACACCTCCCAGAGGTGTTCTTTTGCATGGGTATCCTGGAACAGGGAAAACCTTAGTGGTCCGGGCATTGATAGGTGCATGTGCCCGTGGCGATAGACGGATTGCATATTTTGCCCGCAAAGGTGCAGATTGCTTGGGGAAATACGTGGGCGATGCTGAGCGCCAACTAAGACTATTATTTCAGGTTGCTGAGAGATGTCAACCTTCTATAATATTCTTTGATGAGATAGATGGACTAGCACCTACCCGCACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTATCAACTTTGCTTGCTCTTATGGATGGTTTAAAATCCAGGGGTTCAGTTGTAGTCATAGGTGCAACAAACCGTCCTGATGCCGTTGACCCAGCACTTAGGCGACCTGGAAGATTTGATCGGGAAATTTATTTCCCACTGCCATCAACTGAGGACCGAGCTTCCATTCTGTCACTTCACACTCAGAGGTGGCCTAAACCAATTACTGGGTCCTTGCTTGAGTGGATTGCAAAAAAGACTCCTGGCTATGCTGGTGCAGATCTTCAGGCTCTCTGTACTCAAGCGGCTATCAATGCCTTGAAGAGGAATTTCCCGTTGCAAAAAGTTTTGTCCTTAGCTGAAGAAAAGCATTCTGGTTGGAAGAACCTTAGTCTACCATCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCATTTTTGCATTCCCCACTACCATGCTCCCGGAGAGAAGCAGGAAATGCCACTAATGATGTTGTATGCTCCCCTCTTCCTATCCACCTCATACCTTGTTTATTGGGGCCATTGTGCACACTTCTTGTATCTCTTGATGAAAATCTATGGTTGCCACCTCCTTTATCTAAAGCTGTAACAATGATTAAGAATGAAGTGGTTTCTGCTCTAGACAAAAGGAAAATGCCTATTGATCACTGGTGGTTGCACATTGATGACTTACTGCAAGAAACAAATATTGCTTCTGAGATAAAGAGCAAGCTCATGTGTTTGGGCATTTTATCTGCAAATGATGGCTTTGGTGGTTCTCCTGATACTGCAGATGACACAGATGATAGCACTATGAAGTCTGATCCCTCCATAAAGAATCATTTGGGCATGCGTAGTGGCTTGTTTCTAGACAAGTCATTTGCATTTACTAATAAATCAGGATTTCGAATATTGATTTCTGGAAATCCCCGATCTGGCCAGAGACATCTTGCTTCCTGCTTTCTTTACTGCTTTGTGGGGAGTACTGAAATACAGAAGATTGATATGGCAACCGCTTCACAAGAAGGGCATGGAGATGTAGTGCAAGGCATTGCACAAATATTATTGAAATGTGCTAGTCTTCAATCTTGCATATTATTCATGCCAAGAATTGATTTGTGGGCTGTAAACAAACATGTCCAAATCTATGAGAAGGAAAGTGAGTTGAATACAGAGAAAAGCTCTGCAGAGATTACTGAAGGCGAGGCCAACAAGAAGGCTTCACATGCCTGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGTGTATCGACGTCCTTGATGATTCTGGCTACTTCAGAAGTTTCTTATACAGAACTTCCAAGTAAGATAAGGGAATTCTTCAAGAGTTATCAATCTAAAGACAGCCAATCAACTCCTTTGCAGCAAACAATCCCTCGACTCTCACTGCATCTTGATAGTAATTTTGATAATGAGACGTTGATCACTCTGTCTGTAGAAGAGCTACTGAGAAATTTAGTTGAGCAGCAGATTCAATTGATTCATCAGAGCTCTCATGTTCATCTGGGTGTCCGAAAGGTTTCTGTTGAAGCTTGTGAAGAGAAGGTATGCCAGAGTAAAGATAATGGATCAGTTGATGAAGAGAAGAGTGAAACCCAAGTTCCTAAATCCACATCAGCGCCTCCACCGCCACCACCACCCCCCGATGGTAGGTCTCTGAAGGAAAAGTCAACCTTGTCACTAGCAATATCCACATTTGGTTATCAAATTCTTCTATTCCCACATTTTGCTGAACTTTGTTGGGTCACATCAAAACTCAAAGAAGGTCCTTGTGCTGATGTAAGTGGACCATGGAGGGGGGGCTGGCCTTTTAATTCCTGTGTAATTCGTCCCAATAATTCACTAGACAAGTCAATGGTTCCTGGTAGCTCTGGTGGTGTTAAAAGCAAAGAAAGATCTGGTTTAGTTAGAGGCTTGATTGCCGTTGGTTTATTGGCTTACAGGGGTGTTTATAAATCAGCCAGGGAAGTTTCTCTTGATGTGAGGAAAGTTCTTGAGATCCTAATTGAGAATATCAATGCAAAAATTCAAGCTGGGAAAGACAGATATCAATATCTTCGCATTTTATCGCAAGTGGCTTATTTGGAAGATATAGTAAACAATTGGGCTTATGCATTGCACAGTATGGATAAGGATTCCTTGGAGCCTATATCGAAAGTCATGTCGTCAAGTGATGGGTTAAACAGTCATCTCTCGTGTGTAGATCACCAAGCTGAAACTAAGGATGTTCATATGAACGGTGATGATTCGGAGAACCCAGGGAGAAGTTGTAAGGAAATTCATGCTGAAACAACTGGATTTCCTGCCATGAATAAGAAAAATGATAATACAGATAAACTTGATCACGATGGTAGACATACAAATACAAGCGCTAAAGAATGTCTACCAAATGATTCTTTAAACAATCACTCTGATGACTCTGCTGCTGCAAACCAACCTGTTGATCCATCCCCAAATCAGGAGAATGGATTGCTATCCCGTGAGGTGGCTGAAGGAGATGTCAGGATGTCAGAAGAATTAGGTAAATCCACATCCACTCACTCTGCTGTCCTTTCAGAGAATGGACTTCACACTGCCTTAGAACAAGAAGGTCTTAATGGAGGTACTGTAAGTACCATCTCTAATCAGCCCCCGACCTTGTCCACAGAAGAGACTGGTGTAACTGATGTTTACTCTCGCAAACATGAGAATGCTACAGGTATTGATATCTCTTCAAGTAAAGGCCATGAGCATGCTGAACCTGCGGTCGTTTGCATGTATCAATGTTGCCCTAGATGTCTTCACAGCTTATATCTTGCAATACGCAAGCTTCTCACCAGTGAGTTAAGCGTTAACCATAGAACAGTAGAAGATGTCCATGATGCTGTTTCATCATTATCCGTGGATCTTATTTCAGCAATTAGAAAATGTCACATTGAAGACCTTAATGATTTTTCTAACAAAACCTTCAAAAGAGAAAGGCATGGAATAACTTTGAACTTGAGAACATGTGACTCCAAAAACCAAGACAAGGACTTTGTGGCAGCTGAGTGTGTTACTCACTCAACAAGCCAGGAGGCAACTGCAACCAAAGATGAGGTAGTGAATGAATCACTGAAGCTTGATTTAAAATTTATATTCAGAGATGGTGTGCTGGTTCCTATGAACCCAGACAAAGATGTTTCTCTTCATTGTAAATTTGAAACTCTGTGCCTTTGTTCTCTTAGAGAGTTGATAGTAATGACCAAGAGCCCTTTTGATTAA 5583 0.4336 MRLSSKSGSSSKHKNVGKSSPWLRKKHKRLDAICEKEYNRNHGDSNGCDDXLITDAADSAVRRSSRVRRAPVLLDASPAPPKKRRKLGKVGVPAGRIESGKKNLEQQSPGSSIEGSPSAWRSRLRSRARGAGFEVNDEKELPRRKRKLFEDVVVSRGDDELKVDKKKELEGGVPRIVKSKRPARIKATKHEEELKVNESHEVGPKENESHEEGLRENESHKETLRENESHEEGLQENESFVAKQTEKESYEGHRENECHGNLDESNSQEVELTVNKEEGNDTVPVTDVSGGNLVIILDVNGPPIIGNGERNMSSNLQTEECSDGSEQSPLEHADEQDDRWEHANKQDDQLACEKEGNNASEGAEIAGSSTKQVENEGSADKEAEIGENTLKDANYVTKDKLKQASNGSQRIKEGRRCGLCGGGTDGKPPKRLLQDNGESENEAYSGSSASEEPNFDIWDGFSDEPGWLGHLLGPINDNFGIARIWVHQQCAVWSPEVYFAGLGCLKNVRAALYRGRALKCTRCGRRGATSGCRVDRCPKTYHLPCARASGCIFDHRKFLIACTDHRHLFQPHGNKYLARIKKLKARKLKWDMRKHSNDAWRKDIAAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSACEPSFQGWESVAGLKDVIQCMKEVVILPLLYPELFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDRRIAYFARKGADCLGKYVGDAERQLRLLFQVAERCQPSIIFFDEIDGLAPTRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSTEDRASILSLHTQRWPKPITGSLLEWIAKKTPGYAGADLQALCTQAAINALKRNFPLQKVLSLAEEKHSGWKNLSLPSFAVEERDWLEAFLHSPLPCSRREAGNATNDVVCSPLPIHLIPCLLGPLCTLLVSLDENLWLPPPLSKAVTMIKNEVVSALDKRKMPIDHWWLHIDDLLQETNIASEIKSKLMCLGILSANDGFGGSPDTADDTDDSTMKSDPSIKNHLGMRSGLFLDKSFAFTNKSGFRILISGNPRSGQRHLASCFLYCFVGSTEIQKIDMATASQEGHGDVVQGIAQILLKCASLQSCILFMPRIDLWAVNKHVQIYEKESELNTEKSSAEITEGEANKKASHAWMSFIEQVESIGVSTSLMILATSEVSYTELPSKIREFFKSYQSKDSQSTPLQQTIPRLSLHLDSNFDNETLITLSVEELLRNLVEQQIQLIHQSSHVHLGVRKVSVEACEEKVCQSKDNGSVDEEKSETQVPKSTSAPPPPPPPPDGRSLKEKSTLSLAISTFGYQILLFPHFAELCWVTSKLKEGPCADVSGPWRGGWPFNSCVIRPNNSLDKSMVPGSSGGVKSKERSGLVRGLIAVGLLAYRGVYKSAREVSLDVRKVLEILIENINAKIQAGKDRYQYLRILSQVAYLEDIVNNWAYALHSMDKDSLEPISKVMSSSDGLNSHLSCVDHQAETKDVHMNGDDSENPGRSCKEIHAETTGFPAMNKKNDNTDKLDHDGRHTNTSAKECLPNDSLNNHSDDSAAANQPVDPSPNQENGLLSREVAEGDVRMSEELGKSTSTHSAVLSENGLHTALEQEGLNGGTVSTISNQPPTLSTEETGVTDVYSRKHENATGIDISSSKGHEHAEPAVVCMYQCCPRCLHSLYLAIRKLLTSELSVNHRTVEDVHDAVSSLSVDLISAIRKCHIEDLNDFSNKTFKRERHGITLNLRTCDSKNQDKDFVAAECVTHSTSQEATATKDEVVNESLKLDLKFIFRDGVLVPMNPDKDVSLHCKFETLCLCSLRELIVMTKSPFD* 1861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1593 1860 MobiDBLite consensus disorder prediction 185 270 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 1621 1635 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 1554 1569 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 127 152 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 307 324 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 63 152 - -
Amo08g1593 1860 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 58 1856 - -
Amo08g1593 1860 SMART AAA_5 688 829 IPR003593 -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 1317 1331 - -
Amo08g1593 1860 CDD AAA 686 827 - -
Amo08g1593 1860 Gene3D - 828 888 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 304 387 - -
Amo08g1593 1860 ProSitePatterns AAA-protein family signature. 797 815 IPR003960 GO:0005524|GO:0016887
Amo08g1593 1860 MobiDBLite consensus disorder prediction 1300 1335 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 101 119 - -
Amo08g1593 1860 Pfam PHD-like zinc-binding domain 487 566 - -
Amo08g1593 1860 Pfam ATPase family associated with various cellular activities (AAA) 692 827 IPR003959 GO:0005524|GO:0016887
Amo08g1593 1860 MobiDBLite consensus disorder prediction 1518 1638 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 180 270 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 1 17 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 325 354 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 1570 1604 - -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 1 30 - -
Amo08g1593 1860 PANTHER AAA DOMAIN-CONTAINING 58 1856 IPR045199 -
Amo08g1593 1860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 654 884 IPR027417 -
Amo08g1593 1860 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 463 568 IPR013083 -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 1518 1538 - -
Amo08g1593 1860 ProSiteProfiles Extended PHD (ePHD) domain profile. 428 566 IPR034732 -
Amo08g1593 1860 Pfam AAA+ lid domain 853 885 IPR041569 -
Amo08g1593 1860 MobiDBLite consensus disorder prediction 417 451 - -
Amo08g1593 1860 Gene3D - 653 827 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1593 Amo-Chr8 26132480 26139930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1593 654 889 Calmodulin-binding Proteins AT3G56690 40.756 2.87e-45 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1593 - - ahf:112772466 3598.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1663 18 33551131 33558649 Amo08g1593 08 26132480 26139930 hybridization