Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1568 ATGGAGAAGAAAACAGTTGCTGGATTCTGCATCTTCTTCCTCGTTCTCTTTCTTGCTCAGGAGGGAGTGGTGAAAACAGAGGCAAAGCTATGCAACCACCTGGCAGATACATACAGAGGACCATGCTTTACCAATGCAAGCTGCGATGATCATTGCAAGAACAAAGAGCACTTTGTTAGTGGAACCTGCATGAAAATGGCGTGTTGGTGTGCTCACAACTGTTGA 225 0.4578 MEKKTVAGFCIFFLVLFLAQEGVVKTEAKLCNHLADTYRGPCFTNASCDDHCKNKEHFVSGTCMKMACWCAHNC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1568 74 SMART gth_4 30 74 IPR003614 GO:0006952
Amo08g1568 74 Pfam Gamma-thionin family 30 74 - -
Amo08g1568 74 Gene3D - 29 74 IPR036574 -
Amo08g1568 74 PANTHER DEFENSIN 1 74 - -
Amo08g1568 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Amo08g1568 74 SUPERFAMILY Scorpion toxin-like 29 74 IPR036574 -
Amo08g1568 74 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1568 Amo-Chr8 25783323 25784213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1568 1 74 Plant Defensins Gene Families AT2G02100 26.316 1.12e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1568 - K04661 gmx:100779239 117.472