Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1551 ATGTACGGCAGAAAAGCTTGCGAGCTTGTGAAAGAATTTGCAAGCGTAGGTAAAGGCCAGCTCACACAGTACAATAGTGACCTCTTTGAACAAGTAGTTGCAGAATGCAGCCAGCATCACCTTGAGCTTCAATCTTTGATAAGAAAAATGCAGGAAGAAGGTTTGGATGTCCAAACAGCTAGAAATTCTGACCACTATGGTGCCCTTATCCACCATCTCTCTTTAGTCCGCAATAAGCGATGCCTAATGGCCTATGTAAATAACCGAGCTGAGATTATAAGAAGCTTGTTGTGGAAGATTGGCAGTGTGCTTCCTAAAGAGATTGAGGAGAAGCTTTCTCACACAGAGGAAGAGTATTTCAACAAGTATTCTGGAGAATTGAAAAAATACATGTCAAAAATGGAGTTAGACCTGACAGTGGATATGGTGCCGCCAAAAGATCCTTACATCAAAGTAAGGGTCCTTGATGACATTGGAGATGGCATTGTGCTTAGCGATAAGACTGCCAATTTTGCTCGTCATTCGATCCACTTTCTGAAGCGAACTGATGCCGAACAATTCATTTCACGGGGCTTAATGGAGGAACTCACAGGTTGA 597 0.4271 MYGRKACELVKEFASVGKGQLTQYNSDLFEQVVAECSQHHLELQSLIRKMQEEGLDVQTARNSDHYGALIHHLSLVRNKRCLMAYVNNRAEIIRSLLWKIGSVLPKEIEEKLSHTEEEYFNKYSGELKKYMSKMELDLTVDMVPPKDPYIKVRVLDDIGDGIVLSDKTANFARHSIHFLKRTDAEQFISRGLMEELTG* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1551 198 Pfam GINS complex protein 31 116 IPR021151 -
Amo08g1551 198 PANTHER PARTNER OF SLD5 1 194 IPR005339 GO:0000811|GO:0006260
Amo08g1551 198 Gene3D - 1 134 - -
Amo08g1551 198 CDD GINS_A_psf1 3 136 IPR005339 GO:0000811|GO:0006260
Amo08g1551 198 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1551 Amo-Chr8 25490347 25493820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1551 1 198 Core DNA Replication Machinery Family AT1G80190 67.164 2.17e-100 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1551 K10732 - qsu:112021696 332.798