Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1542 ATGGAACGAGAGATGGTGGACATTGAATCTCAAACTAATCATCAAGAAGTGCCTAACAATGTCTTCCACAAGAGAAATCCTCCGGTGACTCTCAAGTTTGAAGATGTTGTGTACAAAATAAAGATTGAGAATGGTGGAATATTGGAGAAGAAGAAAAAGGCATCAGAACGCAAAGTGATATTGAATGGAGTATCAGGAATTGTTCAACCGGGTGAGATCCTTGCAATGTTAGGTCCGTCAGGAAGTGGCAAGACAACACTGCTGACTGCATTGGGCGGCCGTCTCGGCGGCCGCCTCAAAGGAAAGATAACATACAATGGAGACCCCTTCAGCAATGCCATGAAGAGGAACACCGGCTTCGTCACGCAAGACGATGTCCTACACCCTCATTTGACAGTAACTGAAACCCTTGTTTTCACCGCTCTCCTCCGCCTACCTAACACGGTAGCCAAGGAGGAGAAGGTGGCATTGGCAAAAGTCGTCATAAACCAACTTGGATTGGTCAAGTGTAAAGACAGTATTGTCGGAGGCCCCGGCCTACGAGGGGTTTCGGGTGGAGAAAGAAAAAGGGTTAGTGTTGGTCAAGAATTGCTCATAAACCCTAGTTTGTTGTTCCTTGATGAACCAACCTCGGGTTTGGATTCAACTACCGCATTAAGACTTGTGTCAACTTTGTTTGAGCTTGCAAGAGGAGGAAGAACTATTGTGATGACAATACACCAACCTTCTAGTAGGTTGTACTATATGTTCACTAAGGTGTTGCTTCTTTCAGAAGGGAACACTGTTTATTTTGGAAAGGGTTCGGAGGCATTGGATTATTTCTCTAGTGTTGGATTTTCTCCAGCATTAGCCATGAACCCTGCTGATTTCCTTTTGGATCTTGCTAATGTATCGAAAGGCACTAACCATAGAAGTCACCTCCAAATTAATATGAATTGTGTTAATCTTTGGCATGCTTTGAAATTCTCAAGTGTCAAAATTGACCAATTTAATGTTGTTGACAATGCAAATTCAGGGATATACACCAACGAATTGAACGAGGATGTTGTGGTGGACAAAAAACAATTGATTCAGGCATACAAGAGCTGTAACGCTGATTCCCAATTGAGGCAAATGGTTCAAGTAACGAATAGCAACTCATCAAGTAGAGTTGAGAACACAGCAGGGTTTGGAAAATGGCCTACAAATTGGTGGCAACAATTCACAGTGTTGTTGAGAAGAGACCTTAAAGAGAGAAAGCACGAGGCATTCGCTTCCTTCAATATTATTCAGGTCGTCTTGACTTCTTTCATTGTAGGACTATTGTGGTACAAGTCTGATACCGCACACATGCAAGATCAGCTTGGACTTCTATTCTTCTTATCAAGTTTCTGGGCATTTTATCCGCTGTACAGAGCAATCTTCGTGTTCCCAGATGAAAGAGTGATGTTGGAGAAAGAAAGATCTTCCGGAATGTACAGACTATCCTCATACTTCATGGCCAAGATGACGGTAGACCTTCCAATGGAACTCGTCCTCCCAACCGTTTCCATTCTTATAACCTACTGGATGGCAGCTCTGAAAGCTACCGCCGCCGCCTTCATCTTCATGCTCCTCACTATCCTCACCCTTGTGTTGGTCTCACAAGGCATAGGACTCGCTCTCGGCGCCTGTGTCCAGAACACCAAAGTCGCCACCACCTTCGCCTCCGTCATAGGGCTAACCTTCATGATAACAAGTGGATTCTTTGTCCAGAATGTTCCCAAATTCATAGCATGGTTGAAGTACATTTCTTTCATATATTACGCCAACGAACTCGTTATATTTTCTCAGTATCGTGAAGGTGAGACTTACAAATGTGGTAAGGGTAAGTGCTTGATTTATGAGTACCCTGGAATCAAGGGTTTAGGGTTCGTTAATAATAGAGAGAGTCAATTAAGGGCTTCATTGATTTTGCTAGCAATGCTGTTTTTCTATAGGTTTATAGCTTATGTTGCTCTTATGAGAATTGGAGTCACAAAGAAATCCAAGTCTAGCTAG 2019 0.4309 MEREMVDIESQTNHQEVPNNVFHKRNPPVTLKFEDVVYKIKIENGGILEKKKKASERKVILNGVSGIVQPGEILAMLGPSGSGKTTLLTALGGRLGGRLKGKITYNGDPFSNAMKRNTGFVTQDDVLHPHLTVTETLVFTALLRLPNTVAKEEKVALAKVVINQLGLVKCKDSIVGGPGLRGVSGGERKRVSVGQELLINPSLLFLDEPTSGLDSTTALRLVSTLFELARGGRTIVMTIHQPSSRLYYMFTKVLLLSEGNTVYFGKGSEALDYFSSVGFSPALAMNPADFLLDLANVSKGTNHRSHLQINMNCVNLWHALKFSSVKIDQFNVVDNANSGIYTNELNEDVVVDKKQLIQAYKSCNADSQLRQMVQVTNSNSSSRVENTAGFGKWPTNWWQQFTVLLRRDLKERKHEAFASFNIIQVVLTSFIVGLLWYKSDTAHMQDQLGLLFFLSSFWAFYPLYRAIFVFPDERVMLEKERSSGMYRLSSYFMAKMTVDLPMELVLPTVSILITYWMAALKATAAAFIFMLLTILTLVLVSQGIGLALGACVQNTKVATTFASVIGLTFMITSGFFVQNVPKFIAWLKYISFIYYANELVIFSQYREGETYKCGKGKCLIYEYPGIKGLGFVNNRESQLRASLILLAMLFFYRFIAYVALMRIGVTKKSKSS* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1542 672 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 304 - -
Amo08g1542 672 Pfam ABC transporter 61 211 IPR003439 GO:0005524
Amo08g1542 672 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Amo08g1542 672 Gene3D - 48 277 IPR027417 -
Amo08g1542 672 Pfam ABC-2 type transporter 399 604 IPR013525 GO:0016020|GO:0140359
Amo08g1542 672 SMART AAA_5 70 260 IPR003593 -
Amo08g1542 672 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 319 664 - -
Amo08g1542 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 275 IPR027417 -
Amo08g1542 672 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 319 664 - -
Amo08g1542 672 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 13 304 - -
Amo08g1542 672 MobiDBLite consensus disorder prediction 1 23 - -
Amo08g1542 672 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 283 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1542 Amo-Chr8 25301344 25305640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1542 60 244 Calmodulin-binding Proteins AT2G36910 30.366 3.63e-12 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1484 18 28502045 28506344 Amo08g1542 08 25301344 25305640 hybridization