Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1536 ATGGAGAGCACCGACTCGTCCACCGGTTCGCAACAACCGAACCTTCCACCGGGTTTCCGGTTCCACCCCACCGACGAGGAGCTCGTTGTTCACTACCTGAAGAAGAAAGCTGCATCAGCTCCTCTCCCAGTCGCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCAGCTAAGGCAACGTTTGGGGAGCAAGAGTGGTACTTCTTTAGCCCAAGGGACAGGAAGTATCCGAACGGTGCTCGGCCAAACAGGGCGGCAACTTCCGGGTACTGGAAGGCAACCGGGACGGATAAGCCGGTGCTGACCTCCGGTGGGACCCAGAAGGTCGGCGTGAAGAAGGCTTTGGTCTTCTATGGAGGGAAGCCCCCTAGAGGGATAAAGACAAATTGGATCATGCATGAGTATAGACTTGCTGATAACAAACCTAACAATAGGCCTCCTGGTTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTATTGTGCCGAATCTACAAGAAGAACAACACACATAGGTCTCCAATGGAACATGAGAGGGAAGATTCCATGGATGACATGATTGGAGGGATTCCTCCTTCCATCAACGTGGGCCAAATGAATGCAAGATTTCATCTCTCAAAAATGTCAACAAGCTTTAGCAACGCTTTGTTGGAAAACGACCATCACCATCACCAGAATCTTCTGGAAGGTATGATGCTAGGAGGAGGAACCAACAACAGCAATCCAAACATGTTGGGATTGGGATCAGCCTCAAACACCATTAACAATAATAGTAATAAGGCAGAGCTTTCATTTGTACCAACCATGACTACATCTTCAAACACCAAGAGGACTCTATCATCACTCTATTGGAATGAAGATGATGTTGCTGCTTCCAACAAAAGATTCAATTTGGAAAGTGGAGATCATAACCATGGAGAGAATAATGGTACTAGTGCTAGTTCTATTGCTACTCTGCTGAACCAACTTCCTCAAACCCCTTCATTGCACCAACACAACATCATGGGAACAATACCTTATCAAATTCAAGGAATGAATTGGTATGCTTAG 1077 0.4689 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPMEHEREDSMDDMIGGIPPSINVGQMNARFHLSKMSTSFSNALLENDHHHHQNLLEGMMLGGGTNNSNPNMLGLGSASNTINNNSNKAELSFVPTMTTSSNTKRTLSSLYWNEDDVAASNKRFNLESGDHNHGENNGTSASSIATLLNQLPQTPSLHQHNIMGTIPYQIQGMNWYA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1536 358 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 339 - -
Amo08g1536 358 MobiDBLite consensus disorder prediction 1 20 - -
Amo08g1536 358 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Amo08g1536 358 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Amo08g1536 358 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Amo08g1536 358 MobiDBLite consensus disorder prediction 1 17 - -
Amo08g1536 358 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Amo08g1536 358 PANTHER NAC TRANSCRIPTION FACTOR 56 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1536 Amo-Chr8 25130091 25131954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1536 1 358 NAC Transcription Factor Family AT3G15510 53.488 9.82e-126 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo08g1536 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1536 - - gmx:100170710 582.022