Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1513 ATGGAAGGAAAGCAGAACCTTGATGCTGCAAGAAAGTGCTTGCTAGCTAGCTTGGAAACATCAAGTGCCATTGGTTCTGCATTAGATGAATCTGAATCAAGATTGGAGCTTCTTCGCCAGCGATGTCAATCCCTGCAAACTTCATTCAGACCAATCTCCATGCAGAAATGCTCGTTCATGGACGTTGGCAATGGTATAGATAGTGTTATATGTTCTGCTGCTGCTGTCCTCAAGGTGTTTGAATTTGTGCAGCATTTGGAGAATTCTCTATTGACTGACCCTGTTTCCGATCTATGCTCTTACCTCTCAGATGCCAAGAAGCTTGAAGAAGCCTTGAAGCTTCTCACTGATAATTGCACGTTAGCAATTGGCTGGTTGCAGGGTGTTCTTGACTTCTTACAAGACAAAGTGATCACCAATGAGTTTTACCTCTTTCAGGTGAAGAAATCCTTGAGGATACTGCGAGAATTGCAAGCCGTGGAAGAGGGAGTTTGCATCAATGGAGGTTTTCTCAGTGCAGCCTTAGACAATCTAGAGACTGAGTTCCAAAGACTTCTGATGGCAAACTCAATGCCCATTCCTTTGGTTTCGTTAGGATCACACGTCGCAACACAAGCTTTGCCAGGTTCTGTTATGGGGAAGTTGCAGGCCATCATTGAGCGGTTAAATGCAAACAGCAGGCTAGCCAAGTGTAAGTCTATATATGATGAAGTTCGAGGGACGAATGCTCAAAGAACTTTGAACACTTTAGACTTGAGCTACCTTGAGATTCCAACAGCTAAATTTGAGGATGTCAGGGAAATAGCGAGTTACATAGACCAATGGGGCATTGATTTGGAGTTGGTTGTCAAGAACGTTCTTCATACTGAGTACATGCTATCTTGCCGTGTCTTTGAGAAGATTGGTCGAGAAGCATCGACCGAATGTTTTGCCAGGATCGCCATCAGATCAGGAATTCTTTCATTCATTCTATGTTCTCCTCCCCGAGATAGCGGTGTCCCTAGGCTGGTAAGCTTTGTAACTGATTACTGCAATCAGCTGCTTAATGATACATATCTACCACATTTGAAAAAGGTCCTAGAAATTCATCTTAGTTGGAGAAATGAAACATATGAAGAGGGTATTGTTTTCACACAAATATATGACACAATCAAGGAAGTTGCAGTTAATCTTGATTCTTGGTCAAAGGCCTATGAGGATATCACATTGTCCTACATTTTCATGATAAATAATCATTGCCATTTCTACAATTTGAGGAGTACCATGCTTGGGGATATGATGGGAGATACTTGGTTAGGAGCACATGACCAATACAAGGACTATTATGCAGCACTTTATTTGAGGAATAGCTGCGGAAAGCTTCTATCAATTATTGTTCAAAAAGATTTACTTTCATCCTCATTGAGTAGCCAAGATTTGGGAAAGAGATTGCATGCTTTCAATGTAGCTTTTGATGAGAGGTACAAGATGGAATCTAGTTGGACAATTTGTGATGAGGCCTTGAGGAAAAACATATGCAAGCATTTGGTGGAATGTATTGTACCAATTTATAAGGCCTATGGTGAGGGTGCCTTGAAGTGTACACTGAGGAGTGCACAACCCAGATTGGTTCAACTGATGAACACAAAGTTCAAATCAATCTCTTCAATACAAATTCCTCCAACTAACATGTCCTCTAACTAA 1683 0.4135 MEGKQNLDAARKCLLASLETSSAIGSALDESESRLELLRQRCQSLQTSFRPISMQKCSFMDVGNGIDSVICSAAAVLKVFEFVQHLENSLLTDPVSDLCSYLSDAKKLEEALKLLTDNCTLAIGWLQGVLDFLQDKVITNEFYLFQVKKSLRILRELQAVEEGVCINGGFLSAALDNLETEFQRLLMANSMPIPLVSLGSHVATQALPGSVMGKLQAIIERLNANSRLAKCKSIYDEVRGTNAQRTLNTLDLSYLEIPTAKFEDVREIASYIDQWGIDLELVVKNVLHTEYMLSCRVFEKIGREASTECFARIAIRSGILSFILCSPPRDSGVPRLVSFVTDYCNQLLNDTYLPHLKKVLEIHLSWRNETYEEGIVFTQIYDTIKEVAVNLDSWSKAYEDITLSYIFMINNHCHFYNLRSTMLGDMMGDTWLGAHDQYKDYYAALYLRNSCGKLLSIIVQKDLLSSSLSSQDLGKRLHAFNVAFDERYKMESSWTICDEALRKNICKHLVECIVPIYKAYGEGALKCTLRSAQPRLVQLMNTKFKSISSIQIPPTNMSSN* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1513 560 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 326 521 - -
Amo08g1513 560 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 3 323 - -
Amo08g1513 560 Gene3D Exocyst complex component Exo70 62 325 - -
Amo08g1513 560 Gene3D Exocyst complex component Exo70 326 526 - -
Amo08g1513 560 Coils Coil 28 48 - -
Amo08g1513 560 PANTHER EXOCYST COMPLEX PROTEIN EXO70 326 521 IPR004140 GO:0000145|GO:0006887
Amo08g1513 560 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 323 IPR004140 GO:0000145|GO:0006887
Amo08g1513 560 Pfam Exo70 exocyst complex subunit 326 520 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo08g1513 560 SUPERFAMILY Cullin repeat-like 76 520 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1513 Amo-Chr8 24791797 24793522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1513 327 520 EXO70 exocyst subunit family AT4G31540 48.744 1.40e-60 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1513 K07195 - ahf:112742368 593.964