Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1501 ATGTCACGTGTCAGAGCCAAATATGAAAGTTCAAAGTTAGAGTCAGTTGGTTTGATTGCGATTGCATCTGTGACCAAGCAAATGATGTCCCGAGAAAGAGACAAATTCCTCAATAGCGCTTCCAGATTTAATGGACCTTGCAGCTTGGAGCAATCGTTTTATGGTATCACCGTTTATATTATTAACTATGATTTTTCAATCAAATTTAGACTACCCAGTACCTGCCCTTTAAGCAAAACCATGAGAAGCCTTGTGTCCCTTTTTGTGACTTCTCTTTTCGCTTCATTCTTATCAAGCTTCTCAGCTCTAGACATTCTTACTACACATAAACTCATCAAAGATGGTGACAAGTTAGTTTCCGCAAGAGGGACCTTTGAACTGGGATTCTTCAGCCCTGGTAACTCCAGAAACCGGTATTTGGGAATATGGTACGTGGCTTCACCTAGAACTCCTATATGGGTTGCAAATAGAGAAGCTCCTATTAGAGATGGTTCAGGAATTCTCAGGATCACTAAGGGGGGTATCCTTAACCTTATTAATATCACAGGTAATATTGTTTGGTCATCAAATGCATATGCAACTGCAGAAGATGCATTTGCACAGCTTCTGGAATCAGGGAATCTTGTGGTGAGAGCCTCTAATGGTAGAACCACAGAATCCTATTTGTGGCAGAGTTTTGATTATCCTTWTGACACATATATGCCTGGAATGAAGATTGGGAAGAACCTAGTTACTGGTTTGGAGACATTCTTAACATCTTGGAAGAGTAAAGATGACCCTGCCCCTGGTAAGTACTCAATTCATCTTGARACTCATGGTTGGCCACAGGTGGTTATKAGAAAAGGAACCACTATAGTGTCACGATTTGGATCGTGGAATGGTCTTGAGTTGACAGGAAATCCAGCAAGGTCAGAAGCATCACTGGTCTTTCAATTCACATATAGTGAAAGTGAAGTTTATGTGGGTTACCAACTCAGGAAGAGTTCTGYGTTGTCTATGTTGTCAAGAGATGTACTGCATCCATCAGGCAACATGCAGCGATTCGTATGGATCAATCGGATCCAGAATTGGGCACTCTCCTCAACYTCTCTGTCAAATCAGTGCCAACATTATGCATGGTGTGGTGCTAATGCCGTCTGCAATAYCAATAACTTCCCTYTTTGTGGATGCTTGACCGGGTTCAGTCCTAAGTCTCCAAAAGATTGGAATAATGGGAACTGGTTTACTGGATGTGAACGCAGGACGAACTTGAATTGCCATGATGATGGCTTCTTGAGGTACACAGGAGTTAAATTGCCTAATACCTCCTCATCATTTTTCAGTGAAACCTTGAATCTTAAAGAATGTGGTCAATTGTGCTTAAGTAAATGTTCGTGTACTGCATATGCAAACTTATATGTTGATGGAAGTGGTTGCTTGCTTTGGTTTGTCGAACTGGTGGATATAATCCAATATAGCGAGCGTGGTCAAGACCTTTATGTAAGGCTAGCTGCTTCAGACATTGATAGTGTAAAGAAAATGGAGCGATCCAACAAAGACAAAAGACTAGTGGGTATCATAATTATATGTGGTGTTTTGGTCATGATTATCTTCCTCTTTCTGGGACACTTAACCTATAAACAAAGTGACAGCAGAAGAAAGAGAGAGAAAGTTCACAACCAGGATTACAGATGTGGACAAAGAAAGGAAGAGGTGGACTGGCCAACATTTGATTTTCAAACTATAGTTAATGCAACAGCCAACTTTTCTAGTGATAACAAGGTGGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGCACATTAATTGATGGACAAGAYATAGCTGTGAAGAGGCTCTCCATAAATTCTGGCCAAGGACTAAATGAATTGAGAAATGAAGTCAATACAATTGCTAAGCTTCAGCACCGTAATCTTGTTAAGCTTTTTGGTTGTTGTCTTGAGGAGGAAGAGAAAATGTTAGTATATGAATATGTGCCTAACAAAAGCTTGGACTCCTTTATATTTGACCAAACAAGGAGAAAATTACTAGATTGGCCAACACGCATGCATATTATTGTTGGCATTGCTCGTGGGCTTCTTTATCTTCATCAAGACTCTAGAATGAGGATTATTCACAGGGACCTCAAAGCTAGCAATATTCTTCTAGATGCCAATATGAATCCAAAAATCTCTGACTTTGGGCTTGCGAAGGCCTTTGGGGGAGATCAAACTGAGGCGAAAACTAATCGGATAGTTGGGACATATGGTTATATGCCTCCTGAGTATGCAGTTCATGGGAAATTTTCTGTGAAGTCAGATGTCTTTAGCTTTGGAGTTTTGGCACTGGAGATACTAAGCGGCAAGAAGAATAGAGATTTCAGCGACCCGAATCATAGCCTTAATCTTCTTGGACATAGCTGGAGATTGTGGGTTGAGCAGAGACACTTAGAACTGATTGATGATTCATTAAGCAACGCTTCTGATGAAACTGAAATACTTAGATGCATACATATTGCTCTATTATGTGTGCAACAAAGTCCGGAAGACAGGCCAGACATGCTTTCTGTGGTTGTAATGTTAACTAGTGATAGCAATCTCCCTAAGCCAAAACAGCCTGCATTTTATGTGGAAAGGAATTGTTACAATAAAGGCTTTCTAGCAAGTAATCAGAACACATGTTCTGAAAATGAAGTTACAATCTCAGTGGTAGAGGCAAGGTAG 2700 0.4044 MSRVRAKYESSKLESVGLIAIASVTKQMMSRERDKFLNSASRFNGPCSLEQSFYGITVYIINYDFSIKFRLPSTCPLSKTMRSLVSLFVTSLFASFLSSFSALDILTTHKLIKDGDKLVSARGTFELGFFSPGNSRNRYLGIWYVASPRTPIWVANREAPIRDGSGILRITKGGILNLINITGNIVWSSNAYATAEDAFAQLLESGNLVVRASNGRTTESYLWQSFDYPXDTYMPGMKIGKNLVTGLETFLTSWKSKDDPAPGKYSIHLETHGWPQVVXRKGTTIVSRFGSWNGLELTGNPARSEASLVFQFTYSESEVYVGYQLRKSSXLSMLSRDVLHPSGNMQRFVWINRIQNWALSSTSLSNQCQHYAWCGANAVCNXNNFPXCGCLTGFSPKSPKDWNNGNWFTGCERRTNLNCHDDGFLRYTGVKLPNTSSSFFSETLNLKECGQLCLSKCSCTAYANLYVDGSGCLLWFVELVDIIQYSERGQDLYVRLAASDIDSVKKMERSNKDKRLVGIIIICGVLVMIIFLFLGHLTYKQSDSRRKREKVHNQDYRCGQRKEEVDWPTFDFQTIVNATANFSSDNKVGEGGFGPVYKGTLIDGQDIAVKRLSINSGQGLNELRNEVNTIAKLQHRNLVKLFGCCLEEEEKMLVYEYVPNKSLDSFIFDQTRRKLLDWPTRMHIIVGIARGLLYLHQDSRMRIIHRDLKASNILLDANMNPKISDFGLAKAFGGDQTEAKTNRIVGTYGYMPPEYAVHGKFSVKSDVFSFGVLALEILSGKKNRDFSDPNHSLNLLGHSWRLWVEQRHLELIDDSLSNASDETEILRCIHIALLCVQQSPEDRPDMLSVVVMLTSDSNLPKPKQPAFYVERNCYNKGFLASNQNTCSENEVTISVVEAR* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1501 899 ProSiteProfiles PAN/Apple domain profile. 419 497 IPR003609 -
Amo08g1501 899 Gene3D - 99 226 IPR036426 -
Amo08g1501 899 Pfam Domain of unknown function (DUF3403) 854 899 IPR021820 GO:0004674
Amo08g1501 899 SMART ntp_6 419 496 IPR003609 -
Amo08g1501 899 ProSiteProfiles Protein kinase domain profile. 582 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1501 899 Pfam PAN-like domain 419 482 IPR003609 -
Amo08g1501 899 Pfam D-mannose binding lectin 150 255 IPR001480 -
Amo08g1501 899 PANTHER - 89 897 - -
Amo08g1501 899 CDD PAN_AP_plant 415 497 - -
Amo08g1501 899 SMART blect_4 109 229 IPR001480 -
Amo08g1501 899 PIRSF SRK 76 899 IPR024171 GO:0004674
Amo08g1501 899 Gene3D Phosphorylase Kinase; domain 1 540 657 - -
Amo08g1501 899 Gene3D Transferase(Phosphotransferase) domain 1 658 866 - -
Amo08g1501 899 PANTHER - 89 897 - -
Amo08g1501 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Amo08g1501 899 SUPERFAMILY Protein kinase-like (PK-like) 566 853 IPR011009 -
Amo08g1501 899 Pfam S-locus glycoprotein domain 288 398 IPR000858 GO:0048544
Amo08g1501 899 CDD STKc_IRAK 588 854 - -
Amo08g1501 899 CDD B_lectin 111 229 IPR001480 -
Amo08g1501 899 ProSiteProfiles Bulb-type lectin domain profile. 103 223 IPR001480 -
Amo08g1501 899 SMART serkin_6 582 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1501 899 SUPERFAMILY alpha-D-mannose-specific plant lectins 151 260 IPR036426 -
Amo08g1501 899 Pfam Protein tyrosine and serine/threonine kinase 585 851 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1501 Amo-Chr8 24500178 24504224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1501 498 868 Receptor kinase-like Gene Family AT4G23190 51.200 1.29e-124 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1501 PK_Tyr_Ser-Thr 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1501 - - adu:107462504 1776.14