Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1497 ATGATGAGAACTAGAGRTATTTGCTTCTTATTATTGGTGTSTATAACAAAATCCTTTTCACTAGACATGATTACACCAAGTCAATCCATGAAAGATGGTGATACTTTGGTTTCAGCTGGTGGAACTTTTGAACTTGGATTCTTCAGWCCCGGAGACTCAAGTGGTCGATACCTGGGAATATGGTACAAGCAATCTCCTTCAACACTGACATGGGTTGCCAACCGGAACAAACGAATCAACAGCAACTCATCAGTGTTGGAAATCAACAACCAAGGAGTTCTTGTACTGCACAATGGCTCAAACAAWACATTCTGGTCCTCCAAAGTGTCGAAAGCAGCAGAGAATCCGGTTGCACAGCTCTTGGACTCAGGAAATCTTGTTGTGAGAGATWGAAATGGTGGTAAAKTGGAGAATCTCTTATGGCAAAGTTTTGATTATCCTTGTGATACTTTGTTGCCAGGAATGAAACTTGGATGGAATCTAGAGACAGGACTAAATAGGTTCCTAACTTGTTGGAAAAGTACAGACGATCCTGATTCRGGAGACTACTCGTTTAAAATAGATCTTAGAGGTTATCCACAAGCAGTTCAATTGAAGGGAGATTCTATAATYAGCAGGGCAGGTTCATGGAATGGACTTAGCTTCACAGCACTTCCATATCATAAGCAAAGTCCAGTATTTAAATCTGAGTTTGTTTTGAATGAAAAGGAAATATTCTATGAGTTCCAAGTCCTTGACAATTCTACTTTTTTTAGATACGTCATGACATCTTCGGGGAATCGGCAGCTTTTGCATTGGACAAGTGAAACCAATGTCTGGGAGACTCTCATAACTATACCATCAGCTCGGTGCGACAATTATGCATTGTGTGGCGAGAATTCTGTTTGCAATTCAGTGAACACTCCAGATTGTGCTTGCCTGGAAGGATTTGCACCAAAGGTTCAAAGAGAGTGGGATATGTCATATTGGTCTAATGGTTGTGTTAGGATCACCCCATTAAGTTGTAGCAAAGATGGGTTCATGAAGTACACGGGGATTGTTCTTCCTGACACGTCTTCATCTAGGTATAATAAGACCATTGACCTTCAAGAATGTGAGAGCTTATGTCTGCAAAACTGTTCCTGTACAGCATATGCAAATTTGGATAAGCGCGACGGAGGAAGTGGCTGCTTACTTTGGTTCGGTGATCTGATTGATATGAGYCAATCATATGAAGGTGGCCAAGATATTTATATTCGAGTTCCTTCTTCGGAGCTAGAACATAACAAGAAGATTTACAAAAAGAAGCTTGTAGGCATCATTACTGGCTCTGCTGTATTCATGATATGCTTAATACTTGGACTTGCCATATGTTTATGGAAAAATAAATTTGAGAAGCCAGCAGGGATGTCGAAAGTGGGTTTCTGGAAAGAARTATTATGCAGAAGGGTGGAGGAGGACAGTGATATTCCAACATTTGATTTATCAACCATATTTTATGCCACAAATTGCTTTTCTAGCTACAACAAATTSGGAGCAGGTGGCTTCGGACTTGTGTACAAGGGTGTGCTTGCTGATGGCACTGAGATCGCTGTCAAGAGGCTTTCGAAGAATTCTGAGCAAGGACAGCAAGAGTTCAAAACTGAAGTGCAGTTAATTGCTAAACTTCAGCATCGCAATCTTGTAAAGCTTCTCGGTTGTTGCATTAAACAAAAAGAGAAACTCTTGATTTACGAGTTCATGCCAAACAGAAGTTTGGACCACTTTATTTTTGATGATGGTAGAAGAAAATTATTAGATTGGACTAAGCGCTTCCAAATCATTAGTGGGATAGCTCGAGGCCTACTTTATCTACATCATGACTCAAGGCTAAGAATCATCCATAGAGATCTTAAAACAAGCAACATTCTTCTTGACAATGATATGAATCCAAAAATATCAGACTTTGGTCTCGCAAGGACATTTGGTGGAGATCAAACCGAGGCCTGCACAAAGAGAGTGATGGGAACTCATGGTTATATCTCTCCTGAGTACCCAATGCATGGCTCTTTCTCGACGAAATCTGATGTGTTTAGCTTTGGCGTAATTATGCTTGAGGTCGTTAGTGGGATGAAGAACAAGGAACTCTCTATCCCGCACCAATTTGTTAACCTTCTTGGACATGCATGGGAATTGTGGACTAAGGAGAGGGCTATGGAGCTTGTAGATAAATCGCTTGGTGATTCAGTTGATGAAGCTCAAGTGTTGAGATGCATTCACATAGGGCTTTTGTGTGTGCAAGAGAGACCAGAAAACAGGCCTAACATGTCATCAGTAATCCATATGCTCAATGATGATAAGCCGCTTGCTCGGCCAAAGCAGCCAGCATTTTATCCTCACCAAGAAAGTAATTCTTCAACTAAAACRAGTGAAATGTGTTCAAATAATGATATTTCCATCACACTAAACAAGTTCCTTAAGACAACAATGCAGAACTTGAAGGTTCTGCTATGGTTTTGGTCTTTCCTACTCTCACTTATATTAAGAACCTCCACTTCAATGGACAGTATAGCCCTGAGTCAGTCCATCAGTGATGGAGAGACATTAATTTCGCGCGGAGGAACCTTTGAAGTTGGCTTCTTTAAACCAGGAAACTCAAARAGCCAATACTTCGGCATCTGGTATTATAATGTGTCCCCTTTAACAGTAGTATGGGTGGCCAATAGAGAAAAACCACTCAACAACACATCTGGAATTCTAAAAMTCACTGATCAAGGACTTGTTCTTGTTYATGGCAGCACCAACAGCACTGTGTGGTCCTCCAACATGTCAAGAAAATCAGAGAATCGGAATCTAGTTGCYCAGATCTTGGACTCAGGAAACCTTGTTGTTAAAGATGGACATGATGAGAAGCAAATTCTGTGGCAGAGCTTTGATTATCCCAGTGACACATTCTTGCCAGGAATGAAGCTTGGAATGGATCTTGTGACAGGCCTAGAGAGATCTGTATCATCGTGGAAGAGCACTGATGATCCTAGCCGTGGATACTACGAAGCTAAAATAGACCGTAGAGGCTATCCACAAGTAGTTATAACAAATGGAACCGTTATAATCGTTAGATTAGGACCATGGACTGGTCTTACTTTCTCAGGGGCTACACTTTACTTGCGCTATACTCAACTGTCAAATGAATTTGTATTCAATGAGAAAGAGATATTTTATGAGTACAATCTTTTGAATATATCTAATTTTGTGAGAATTGTGGTGACAACTTGGGGGAATCTTCAGTCTTTTCATTGGTTAAGACAAACCGGCAGCTGGGAGACTCTTCTTTCAATGCCGGCGACACAATGTGATAAGTATGCAGTGTGTGGRGCAAATTCTATCTGTAGTGTCTTTAACACTGCATTTCCAACTTGCGCATGCCTGAACGGATTTGTACCAAATTATCCTGAAAAATGGAAGGAATCACATTGGTCTGATGGTTGTGTTAGGATCACTCCATTGAGCTGCAGCAAAGATGGATTTAAGAAGCTCACAAACATGGTGCTYCCTGACACATCTTCTTCCTGGTACAATAAGACCATGACCTTGCAAGAATGTGAGGATTTGTGTCTGAAAAATTGTTCTTGCACAGCATATGCTAATTTGGATATCCGCGGCCGAGGAAGTGGGTGCTTAATTTGGTTTCATGATCTCATTGACATGAAAGAAGGGGTAAATGAACTTTATATCCGAACAACTATTTCAGATCTAGAAGATAATCAGAACAATGATTCCAGCAAGAAGAAGCTAGCAGGAATCCTCGATGGATCCGCATTGTTTGTCATGTGCTTAGTACTTGGACTGGCAATCTATGTATGGAGAAACAAACCTAAGAAGCCAGAAATATTCTGCTGGAAGCAACATGCTTGCAAAATAGAAAATGAGGATGTTGATCTTCCAAGCTTTGAGTTATCAACCATAGCTTCTGCCACTAATCACTTCTCTAGTGGCAACAAATTAGGTGAAGGTGGATTTGGACCTGTGTACAAGGGTGTACTCGCAAATGGGGTAGAGATTGCTGTCAAGAGGCTTTCCAAGAATTCTCAGCAAGGACTMCAGGAGTTCAAAACTGAAGTTCAGTTAATTGCTAAACTTCAGCATCGCAATCTTGTAAAACTTCTTGGTTGTTGCATTCAACAAAAAGAGAAGCTCTTGATTTATGAGTTCATGCCCAATAGGAGTTTGGACTACTTCATTTTTGGTTCATTTCTAAACCATTCTGAATTTCTCATTATATTTCACAATTACCACAARATAGTAGATGTCAAGTTAACCTTGAATGCACTCGACATACCAGATGATTCTAGAAGAAAATTATTGGATTGGGGCAAGCGATTTCAAATTATTGGCGGGACAGCTCGAGGCCTAGTCTATCTACATCAAGACTCTAGGCTAAGAGTCATTCATAGAGACTTGAAAACGAGCAATATCCTTCTTGATAAGGGTATAGATCCTAAAATATCAGACTTTGGCCTTGCTAGGACATTTGGAGGAGATCAAACTGTGGCGAATACAAAGCGAGTCATGGGAACTCATGGTTATATCTCTCCGGAGTATGCAGTGCGTGGTTCTTTCTCAATGAAATCCGATGTGTTCAGCTTTGGTGTAATCGTACTTGAGGTAGTGAGTGCGAAGAGGAACAGGGAATTCTCAATTCCACACCAAGATCTGAACCTTCTTGGATATGCATGGAAATTGTGGACTGAAGGAAGGTCTCTGGAGCTGGTAGATGAATCACTTGGTGATTCAGTTGATGAAGCTCAAGTGTTGAGATGCATTCACATAGGGCTTTTGTGTGTGCAAGAGAGACCAGAAWAKAGGCCTAYCATGTCATCAGTAATCCATATGCTCAATGATGATAAGCRGCTTGCTCWGCCAAAGCAGCCKGCATTTTATCCTCACCAAGAAAGTAGTTCTTCAKCCATAAACAATGAAARCTGTTCAAAAAATGATGTTTCCATCACATTGTTAGAGGCAAGATACTTAAATAGCTAA 4998 0.4042 MMRTRXICFLLLVXITKSFSLDMITPSQSMKDGDTLVSAGGTFELGFFXPGDSSGRYLGIWYKQSPSTLTWVANRNKRINSNSSVLEINNQGVLVLHNGSNXTFWSSKVSKAAENPVAQLLDSGNLVVRDXNGGKXENLLWQSFDYPCDTLLPGMKLGWNLETGLNRFLTCWKSTDDPDSGDYSFKIDLRGYPQAVQLKGDSIISRAGSWNGLSFTALPYHKQSPVFKSEFVLNEKEIFYEFQVLDNSTFFRYVMTSSGNRQLLHWTSETNVWETLITIPSARCDNYALCGENSVCNSVNTPDCACLEGFAPKVQREWDMSYWSNGCVRITPLSCSKDGFMKYTGIVLPDTSSSRYNKTIDLQECESLCLQNCSCTAYANLDKRDGGSGCLLWFGDLIDMSQSYEGGQDIYIRVPSSELEHNKKIYKKKLVGIITGSAVFMICLILGLAICLWKNKFEKPAGMSKVGFWKEXLCRRVEEDSDIPTFDLSTIFYATNCFSSYNKXGAGGFGLVYKGVLADGTEIAVKRLSKNSEQGQQEFKTEVQLIAKLQHRNLVKLLGCCIKQKEKLLIYEFMPNRSLDHFIFDDGRRKLLDWTKRFQIISGIARGLLYLHHDSRLRIIHRDLKTSNILLDNDMNPKISDFGLARTFGGDQTEACTKRVMGTHGYISPEYPMHGSFSTKSDVFSFGVIMLEVVSGMKNKELSIPHQFVNLLGHAWELWTKERAMELVDKSLGDSVDEAQVLRCIHIGLLCVQERPENRPNMSSVIHMLNDDKPLARPKQPAFYPHQESNSSTKTSEMCSNNDISITLNKFLKTTMQNLKVLLWFWSFLLSLILRTSTSMDSIALSQSISDGETLISRGGTFEVGFFKPGNSKSQYFGIWYYNVSPLTVVWVANREKPLNNTSGILKXTDQGLVLVXGSTNSTVWSSNMSRKSENRNLVAQILDSGNLVVKDGHDEKQILWQSFDYPSDTFLPGMKLGMDLVTGLERSVSSWKSTDDPSRGYYEAKIDRRGYPQVVITNGTVIIVRLGPWTGLTFSGATLYLRYTQLSNEFVFNEKEIFYEYNLLNISNFVRIVVTTWGNLQSFHWLRQTGSWETLLSMPATQCDKYAVCGANSICSVFNTAFPTCACLNGFVPNYPEKWKESHWSDGCVRITPLSCSKDGFKKLTNMVLPDTSSSWYNKTMTLQECEDLCLKNCSCTAYANLDIRGRGSGCLIWFHDLIDMKEGVNELYIRTTISDLEDNQNNDSSKKKLAGILDGSALFVMCLVLGLAIYVWRNKPKKPEIFCWKQHACKIENEDVDLPSFELSTIASATNHFSSGNKLGEGGFGPVYKGVLANGVEIAVKRLSKNSQQGLQEFKTEVQLIAKLQHRNLVKLLGCCIQQKEKLLIYEFMPNRSLDYFIFGSFLNHSEFLIIFHNYHKIVDVKLTLNALDIPDDSRRKLLDWGKRFQIIGGTARGLVYLHQDSRLRVIHRDLKTSNILLDKGIDPKISDFGLARTFGGDQTVANTKRVMGTHGYISPEYAVRGSFSMKSDVFSFGVIVLEVVSAKRNREFSIPHQDLNLLGYAWKLWTEGRSLELVDESLGDSVDEAQVLRCIHIGLLCVQERPEXRPXMSSVIHMLNDDKXLAXPKQPAFYPHQESSSSXINNEXCSKNDVSITLLEARYLNS* 1666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1497 1665 SMART blect_4 846 967 IPR001480 -
Amo08g1497 1665 SMART blect_4 27 147 IPR001480 -
Amo08g1497 1665 PANTHER - 1432 1660 - -
Amo08g1497 1665 PANTHER - 826 1402 - -
Amo08g1497 1665 PANTHER - 7 808 - -
Amo08g1497 1665 ProSiteProfiles Protein kinase domain profile. 498 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1497 1665 Pfam PAN-like domain 335 400 IPR003609 -
Amo08g1497 1665 Pfam PAN-like domain 1157 1222 IPR003609 -
Amo08g1497 1665 CDD B_lectin 27 147 IPR001480 -
Amo08g1497 1665 ProSiteProfiles Protein kinase domain profile. 1315 1632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1497 1665 SMART serkin_6 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1497 1665 SMART serkin_6 1315 1618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1497 1665 SUPERFAMILY Protein kinase-like (PK-like) 481 793 IPR011009 -
Amo08g1497 1665 SUPERFAMILY alpha-D-mannose-specific plant lectins 889 998 IPR036426 -
Amo08g1497 1665 Pfam S-locus glycoprotein domain 206 313 IPR000858 GO:0048544
Amo08g1497 1665 Pfam S-locus glycoprotein domain 1026 1135 IPR000858 GO:0048544
Amo08g1497 1665 Gene3D Phosphorylase Kinase; domain 1 468 573 - -
Amo08g1497 1665 Gene3D Phosphorylase Kinase; domain 1 1282 1390 - -
Amo08g1497 1665 ProSiteProfiles PAN/Apple domain profile. 1157 1234 IPR003609 -
Amo08g1497 1665 Gene3D Transferase(Phosphotransferase) domain 1 574 781 - -
Amo08g1497 1665 Gene3D Transferase(Phosphotransferase) domain 1 1429 1630 - -
Amo08g1497 1665 CDD STKc_IRAK 505 770 - -
Amo08g1497 1665 ProSiteProfiles PAN/Apple domain profile. 335 415 IPR003609 -
Amo08g1497 1665 CDD B_lectin 846 967 IPR001480 -
Amo08g1497 1665 SUPERFAMILY Protein kinase-like (PK-like) 1298 1640 IPR011009 -
Amo08g1497 1665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Amo08g1497 1665 Gene3D Hepatocyte Growth Factor 1155 1231 - -
Amo08g1497 1665 Gene3D Hepatocyte Growth Factor 333 411 - -
Amo08g1497 1665 PANTHER - 7 808 - -
Amo08g1497 1665 Pfam Protein tyrosine and serine/threonine kinase 502 769 IPR001245 GO:0004672|GO:0006468
Amo08g1497 1665 Pfam Protein tyrosine and serine/threonine kinase 1317 1618 IPR001245 GO:0004672|GO:0006468
Amo08g1497 1665 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
Amo08g1497 1665 CDD STKc_IRAK 1321 1619 - -
Amo08g1497 1665 CDD PAN_AP_plant 1153 1233 - -
Amo08g1497 1665 Pfam D-mannose binding lectin 888 993 IPR001480 -
Amo08g1497 1665 Pfam D-mannose binding lectin 68 173 IPR001480 -
Amo08g1497 1665 ProSiteProfiles Bulb-type lectin domain profile. 840 963 IPR001480 -
Amo08g1497 1665 SMART ntp_6 335 414 IPR003609 -
Amo08g1497 1665 SMART ntp_6 1157 1234 IPR003609 -
Amo08g1497 1665 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 178 IPR036426 -
Amo08g1497 1665 PANTHER - 1432 1660 - -
Amo08g1497 1665 PANTHER - 826 1402 - -
Amo08g1497 1665 CDD PAN_AP_plant 331 415 - -
Amo08g1497 1665 Gene3D - 18 144 IPR036426 -
Amo08g1497 1665 Gene3D - 835 964 IPR036426 -
Amo08g1497 1665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1468 1480 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1497 Amo-Chr8 24475970 24483551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1497 450 807 Receptor kinase-like Gene Family AT3G45860 51.194 8.28e-115 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1497 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1497 - - ahf:112769728 3205.23