Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1496 ATGGAAAAGTTGAAGATGCTGTGGTCTTGGTCCTTTCTATTCTCACTTATATTAAGAACCTCCACCTCACTTGACAATATAACCGTTTTTCAATCCCTCAGCGATGGAGAGACATTGATTTCACATGAAGGAATCTTTGAACTTGGTTTCTTCAGTCCTGGAAACTCAAAGGGCCGATACGTAGGTATCTGGTACCATAATAGGTCCCCTTTAACAGTTGTGTGGGTTGCCAACAGAGAAACTGCACTCAATGATACCTCTGGAGTTTTAAAAGTAACCCATCAAGGACTTGTTCTCCTTGTTAATGGCACCAGCAACAGCACTGTGTGGTCTTCCACCATGTCAATCAAAGCGGAGAATCCGGTTGCACAGCTCCTGGTCTCAGGAAATCTTGTTGTCAAAGATGGCCATAATGAGGAGAACTTCTTGTGGCAGAGTTTTGATTTTCTTGGCGATACTTTCTTACCAGGATCAAAGATAGGTTGGGATCCAGTGACAGGGATAGAGAGAACCTTAACATCTTCGAAAAGTGCTGATGATCCCGGCCATGGAGACTTCAAATTCAGAATAGACCCCAGAGGCTATCCACAAGCTGTTCTAACAAACGGAACGGTTATAATGGTCAGAGTAGGACCCTGGAATGGACTTATGTTTTCAGGAGCTACCATTTATTTGCGCTATAGTAAATTACTGCCAACTGATTATGATTTCATTGATAAGGAGCTAATTTGTAAACTCCAACCTTTACATGCATATAGTGTTATTAGAAGTGTGGTGACCCCTTGGGGTGGTGTGCAGCTTCTGCATTGGTCAAGACAAACCAGTAGCTGGGAGACACTTCTTTCTTTACCAGAAGGTGAATGTGACAAGTATGCGCACTGTGGCGCAAATTCTGTTTGTAGAGTCACTCCGGCTCCAATCTGCACATGCCTAGAAGGATTTGTTCCAAAATACTCAAGAAAGTGGAAGGACATGTATTGGTCTGATGGTTGTGTTAGGATCACTCCATTAAGTTGCAGCAAAGATGGTTTCAAGAAGCACTCAGGTGTGGTGTTGCCTGACACATCTACCTCTTGGCATAACATGACCATGAACCTGCAGGAATGTGAGGCCTTGTGTAGGAAAAATTGTTCCTGTACGGCATATTCCAATTTGGATGTCCGTGGCGGAGGAAGTGGTTGCATACTTTGGTTTCATGATTTGATTGATATGAGACAAGGAGGACAAGATCTTTATATTCGACTACCTATGTCAGAGCTAGGTGATGAGTCAAACAAGAAAAAGCTTGTAGGCATGATTGTTGGCTCCATTTTGTTCTTTATGAGCATGATGTTTGGACTGGTTCTATGTCTATGGAGAAAGAAACTTGAGGAACCAGAAATATTTTGGTGGAAGCAACGGGCTCACGAAAGGGAAAAGGATGACATGGATCTTCCAATGTTTGATTTATCAACCATAGTTTATGCCACTAATTACTTCTCTAGTGACAACAAATTGGGAGAAGGTGGATTTGGATCTGTATACAAGGGTGCACTTGAAAATGGGACAGAGATTGCTGTGAAGAGGCTTTCCATTGACTCTGAACAAGGACTGGATGAGTTTAAAAATGAAGTTCAGTTAATTGCAAAACTTCAGCATCGCAACCTTGTAAAGCTTCTTGGCTGTTGCATTCAACGAAAAGAAAAACTCTTGATTTATGAGCTCGTGCCCAATAGGAGTTTGGACACCTTTATTTTTGATGATTCTAGAAGAAAATTATTAGATTGGGCAAAGCGCTTTCAAATTATTGGCGGAACAGCTCGAGGCCTAGTTTATTTACATCAAGATTCTAGGCTAAGAGTGATTCATAGAGATCTAAAAACTAGCAATATACTTCTTGATAAAGACATGAACGCGAAAATATCAGACTTTGGTCTTGCTAGGACATTTGCCGGAGATCAAACTGAGGCCAGAACAAAAAGAGTGATGGGAACTTATGGTTATATTTCTCCAGAGTATGCGGTGCGTGGATCCTTCTCAATGAAATCTGATGTGTTCGCTTTTGGTGTAATTGTGCTTGAGATAGTAAGTGGCAAGAAGAACAGAGAGTTTTGTGTCCCTCACCAGAGTCTTAACCTTCTTGGACATGCATGGGAGCTCTGGAATGAGGAGAGGCCCTTGGAACTGGTAGATGAATCAGTGCGCAATTCGGTGATTGAAGTTGAAGCATTGAGATGCATACACATAGGGCTGTTATGTGTTCAAGGGAGACCAGAAGATAGGCCTAACATGTCATCTGTAGTTCGTATGCTGGAAGATGATAAACCATTGCCCAAGCCGAGGCTTCCGGCATTTTACTCACACCAGGAAGAATCTATGGGAAGAGATGATGGAGTTTCAGCAAATGAGGTTACCATATCATTGTTAGGAGCAAGATAA 2418 0.4206 MEKLKMLWSWSFLFSLILRTSTSLDNITVFQSLSDGETLISHEGIFELGFFSPGNSKGRYVGIWYHNRSPLTVVWVANRETALNDTSGVLKVTHQGLVLLVNGTSNSTVWSSTMSIKAENPVAQLLVSGNLVVKDGHNEENFLWQSFDFLGDTFLPGSKIGWDPVTGIERTLTSSKSADDPGHGDFKFRIDPRGYPQAVLTNGTVIMVRVGPWNGLMFSGATIYLRYSKLLPTDYDFIDKELICKLQPLHAYSVIRSVVTPWGGVQLLHWSRQTSSWETLLSLPEGECDKYAHCGANSVCRVTPAPICTCLEGFVPKYSRKWKDMYWSDGCVRITPLSCSKDGFKKHSGVVLPDTSTSWHNMTMNLQECEALCRKNCSCTAYSNLDVRGGGSGCILWFHDLIDMRQGGQDLYIRLPMSELGDESNKKKLVGMIVGSILFFMSMMFGLVLCLWRKKLEEPEIFWWKQRAHEREKDDMDLPMFDLSTIVYATNYFSSDNKLGEGGFGSVYKGALENGTEIAVKRLSIDSEQGLDEFKNEVQLIAKLQHRNLVKLLGCCIQRKEKLLIYELVPNRSLDTFIFDDSRRKLLDWAKRFQIIGGTARGLVYLHQDSRLRVIHRDLKTSNILLDKDMNAKISDFGLARTFAGDQTEARTKRVMGTYGYISPEYAVRGSFSMKSDVFAFGVIVLEIVSGKKNREFCVPHQSLNLLGHAWELWNEERPLELVDESVRNSVIEVEALRCIHIGLLCVQGRPEDRPNMSSVVRMLEDDKPLPKPRLPAFYSHQEESMGRDDGVSANEVTISLLGAR* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1496 805 Pfam Protein tyrosine and serine/threonine kinase 496 764 IPR001245 GO:0004672|GO:0006468
Amo08g1496 805 ProSiteProfiles Protein kinase domain profile. 493 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1496 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 180 IPR036426 -
Amo08g1496 805 SMART blect_4 30 150 IPR001480 -
Amo08g1496 805 Gene3D Phosphorylase Kinase; domain 1 461 568 - -
Amo08g1496 805 Gene3D Transferase(Phosphotransferase) domain 1 569 771 - -
Amo08g1496 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Amo08g1496 805 PANTHER - 12 785 - -
Amo08g1496 805 Pfam PAN-like domain 339 404 IPR003609 -
Amo08g1496 805 CDD STKc_IRAK 499 765 - -
Amo08g1496 805 PIRSF SRK 1 805 IPR024171 GO:0004674
Amo08g1496 805 Pfam D-mannose binding lectin 72 176 IPR001480 -
Amo08g1496 805 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Amo08g1496 805 SUPERFAMILY Protein kinase-like (PK-like) 477 765 IPR011009 -
Amo08g1496 805 SMART ntp_6 339 415 IPR003609 -
Amo08g1496 805 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524
Amo08g1496 805 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Amo08g1496 805 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 785 - -
Amo08g1496 805 Gene3D - 20 147 IPR036426 -
Amo08g1496 805 CDD B_lectin 31 149 IPR001480 -
Amo08g1496 805 CDD PAN_AP_plant 335 416 - -
Amo08g1496 805 Gene3D Hepatocyte Growth Factor 337 412 - -
Amo08g1496 805 ProSiteProfiles PAN/Apple domain profile. 339 416 IPR003609 -
Amo08g1496 805 SMART serkin_6 493 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1496 Amo-Chr8 24462692 24465890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1496 437 798 Receptor kinase-like Gene Family AT4G23190 50.815 4.38e-120 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1496 PK_Tyr_Ser-Thr 9.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1496 - - aip:107611884 1181.01