LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo08g1495	ATGAACGCGAAAATATCAGACTTTGGTCTTGCTAGGACATTTGCCGGAGATCAATCTGAGGCCACAACAAAAAGAGTGATGGGAACATATGGCTATATTTCTCCTGAGTATGCAGTGCACGGATCCTTCTCAACGAAATCTGATGTGTTCGCCTTTGGCGTCATTGTGCTTGAGATAGTCAGTGGGAAGAAGAACAGAGAGTTTTGCGTCCCTCACCAACGTCTCTACCTTCTTGGACATGCATGGGAGCTCTGGAATGAGGAGAGGCCTTTGGAGCTAGTGGATGAATCAGTGCGCGATTCGGTCATTGAAGTTGAAGCATTYAGATGCATACAGATAGGGCTTTTATGTGTTCAAGGGAGACCAGAAGATAGGCCTAACATGTCATCTGTAGTTCGTATGCTGGAAGATGATAAACCGTTGCCTGAGCCGAGGCTGCCGGCGTTTACTCGCACCATGAAGAATCTTTGGGAAGAGATGATGAAGTTTCAGCAAATGAGGTTACCGTTTCATCGTTAG	519	0.4624	MNAKISDFGLARTFAGDQSEATTKRVMGTYGYISPEYAVHGSFSTKSDVFAFGVIVLEIVSGKKNREFCVPHQRLYLLGHAWELWNEERPLELVDESVRDSVIEVEAFRCIQIGLLCVQGRPEDRPNMSSVVRMLEDDKPLPEPRLPAFTRTMKNLWEEMMKFQQMRLPFHR*	173

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo08g1495	172	Pfam	Protein tyrosine and serine/threonine kinase	3	135	IPR001245	GO:0004672\|GO:0006468
	Amo08g1495	172	Gene3D	Transferase(Phosphotransferase) domain 1	1	143	-	-
	Amo08g1495	172	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	1	159	-	-
	Amo08g1495	172	PANTHER	S-LOCUS LECTIN KINASE FAMILY PROTEIN	1	159	-	-
	Amo08g1495	172	SUPERFAMILY	Protein kinase-like (PK-like)	2	157	IPR011009	-
	Amo08g1495	172	ProSiteProfiles	Protein kinase domain profile.	1	146	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo08g1495	Amo-Chr8	24461845	24462543	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo08g1495	1	149	Receptor kinase-like Gene Family	AT4G11480	52.318	9.09e-50	167

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Amo08g1495		PK_Tyr_Ser-Thr	1.5e-15	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo08g1495	-		-	ahf:114924322	351.673