Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g1490 | ATGCAAAACCAGAAAGTTCTATGCTTTTGGTCCGTTCTGTTCTCATTTATATTAAGAAACTCTACTTCACTAGACAATATAACTCCTGTTCAATCCATCACTGATGGACAAACATTAATTTCGAATGGAGGAACCTTTGAACTTGGCTTCTACAGCCCCGGAAATTCAAATGGCCGATACTTAGGCATATGGTACCATAACATATTCCCTAAGGTAGTGGTATGGGTGGCAAACAGAGAAAAACCCCTCAACAACACCTCCGGAGTTCTAAAAGTCACCGGTGAAGGACTTGTTGTCCTTATTAGTGGCAGCACCAACAGCAGCGTTGTGTGGTCCTCCAACATGTCAAGCAAAGTGGAAGACAAATTGAATCCAGTTGCACAGCTCTTGGAGTCAGGAAACCTTGTTGTCAAAGATGATCATAATGGTGACCACTTTCTGTGGCAGAGCTTTGATTATCCTTGTGATACAATCGTGCCCGGAATGAAGGTGGGATGGGACCTTGTGACAGGTCTAGAGAGGACTATGTCATCTTCGAAAAGTACAGATGATCCCGGCCGCGGAGACTACACAGTTAGAATAGACCTTCGAGGCGATCCGCAAATAGTTCTAATGAATGGAAATGCCACAAGAATTAGAGTAGGGCCATGGAATGGGATAATGTTTTCTGGAGCTACACTTTATTTGCGCTATGACCAATTCTCATCTCAATTTGTTTTCAATGAAAAAGAGGTGTTTGTTAGGTTCAGACCAAATACATCCAAATATATTAGAGGTGTAGTGTACCCTTGGGGAGGTGTTCAGGTTTTGCATTGGTCAATACAAACCAGAGGCTGGGAGACCCTTATTTCTATACCGGAGGCCGAATGTGACAAGTATGCTACTTGTGGTGCAAATTCTATTTGCAGTACTACTCCTACTCCTGTCTGTTCATGCCTTGAAGGATTTGCACCAAAATATCCTGCAAAATGGAAGGAATCTGATTGGCCTGATGGTTGTGTTAGGATCACTCCTTTAAGTTGCAGCAGAGATGGATTCAAGAAGGTCACCGGCATAGTGTTGCCGGATACGTCTGCTTCTTGGTATAACAGGACCATGAACCTGCTGGAATGCAAGGAATTCTGTCTGAAAAATTGTTCTTGTACGGCATATTCCGATTTGGATATCCGTGATGGAGGAAGCGGTTGCTTGATCTGGTTTCATGATCTTGTGGACATTAGACAAGGTTCACAAGATTTCTATATTCGAATAGATGATAAGCAGAACAATGATTCCAGCAAGAGGAAGCTAGCAGTTATCATTGTTGGCTCTATATTGTTCATCACGATCATAATACTTGGACTGAAATCATTTCTATGGAGAAAAAGACTTGAGGAGTCAGATATATTTTGGCTGAGGCAACGTGATCACAAAAAGGAAAAGGAAAACATGGACCTCCCAACATTTGATTTATCAACCATAGTTTGTGCCACTGATCAATTTTCTAGCAGTAATGAATTGGGAAAAGGRGGATATGGACCAGTTTATAAGGGTGTACTTGCAAATGGGACTGAGATTGCCGTAAAGAGACTTTCCAAGAACTCTGACCAAGGACTGCAGGAGTTCAAAACGGAAGTTCAGCTAATTGCAAAACTTCAGCATCGCAACCTCGTAAAGCTTCTTGGTTGTTGCATTCAGCAAGAAGAGAAACTTTTGATTTATGAGCTCATGCCCAACAGGAGTTTGGACTACTTTATTTTTGATGATGCTAGAAGAAAATTATTAGATTGGMCTAAGCGCTTTCACATTATTCGTGGCACAGCTCGAGGCCTAGTCTACCTGCATCAGGACTCTAGGCTAAGAGTCATTCATAGAGATCTAAAAACTAGTAATATTCTTCTTGACAAAGACATGAATGCYAAAATATCAGACTTCGGTCTTGCTAGGACATTTGCATGTGATCAGATTGAAGACAAGACAAAAAGAGTGGTGGGAACTCATGGTTATATTTCGCCCGAYTATGCCGTTCGTGGCTCATTTTCAATGAAATCTGATGTGTTRGCCTTTGGTGTAATCGTGCTTGAGGTAGTCAGTGGGAGGAAGACTAGAGAGTTCTGTGTCCCTAACCGAAGTCTTAACCTTCTTGGATTTGCATGGGAGCTATGGAATGAGGAGAGGACTTTGGAGCTGGTAGATGAATCACTGTGCGATTCGGTGAATCAAGCTGAAGCATCGAGATGCATTCAGATAGGACTGTTGTGTGTGCAAGAGAGACCAGAACATAGGCCAAACATGTCATCTGTAGTTCATATGTTGGATGATGATAAACCATTGCCTCGGCCAAGGCTGCCTGCATTTTATTCACACCAACAACATTCTACACTAATTGATGGTGAAGATGGTGAAGAAGCTCATTCCGCAAATGAGGTTACCATATCATTGTTAGGGGCAAGGTAG | 2436 | 0.4212 | MQNQKVLCFWSVLFSFILRNSTSLDNITPVQSITDGQTLISNGGTFELGFYSPGNSNGRYLGIWYHNIFPKVVVWVANREKPLNNTSGVLKVTGEGLVVLISGSTNSSVVWSSNMSSKVEDKLNPVAQLLESGNLVVKDDHNGDHFLWQSFDYPCDTIVPGMKVGWDLVTGLERTMSSSKSTDDPGRGDYTVRIDLRGDPQIVLMNGNATRIRVGPWNGIMFSGATLYLRYDQFSSQFVFNEKEVFVRFRPNTSKYIRGVVYPWGGVQVLHWSIQTRGWETLISIPEAECDKYATCGANSICSTTPTPVCSCLEGFAPKYPAKWKESDWPDGCVRITPLSCSRDGFKKVTGIVLPDTSASWYNRTMNLLECKEFCLKNCSCTAYSDLDIRDGGSGCLIWFHDLVDIRQGSQDFYIRIDDKQNNDSSKRKLAVIIVGSILFITIIILGLKSFLWRKRLEESDIFWLRQRDHKKEKENMDLPTFDLSTIVCATDQFSSSNELGKGGYGPVYKGVLANGTEIAVKRLSKNSDQGLQEFKTEVQLIAKLQHRNLVKLLGCCIQQEEKLLIYELMPNRSLDYFIFDDARRKLLDWXKRFHIIRGTARGLVYLHQDSRLRVIHRDLKTSNILLDKDMNAKISDFGLARTFACDQIEDKTKRVVGTHGYISPDYAVRGSFSMKSDVLAFGVIVLEVVSGRKTREFCVPNRSLNLLGFAWELWNEERTLELVDESLCDSVNQAEASRCIQIGLLCVQERPEHRPNMSSVVHMLDDDKPLPRPRLPAFYSHQQHSTLIDGEDGEEAHSANEVTISLLGAR* | 812 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g1490 | 811 | Gene3D | Transferase(Phosphotransferase) domain 1 | 570 | 771 | - | - | |
Amo08g1490 | 811 | Pfam | S-locus glycoprotein domain | 213 | 319 | IPR000858 | GO:0048544 | |
Amo08g1490 | 811 | PANTHER | S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED | 14 | 807 | - | - | |
Amo08g1490 | 811 | Pfam | Protein tyrosine and serine/threonine kinase | 497 | 765 | IPR001245 | GO:0004672|GO:0006468 | |
Amo08g1490 | 811 | SMART | blect_4 | 30 | 154 | IPR001480 | - | |
Amo08g1490 | 811 | CDD | STKc_IRAK | 500 | 766 | - | - | |
Amo08g1490 | 811 | PIRSF | SRK | 2 | 811 | IPR024171 | GO:0004674 | |
Amo08g1490 | 811 | SMART | ntp_6 | 341 | 417 | IPR003609 | - | |
Amo08g1490 | 811 | ProSiteProfiles | Protein kinase domain profile. | 494 | 776 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo08g1490 | 811 | ProSiteProfiles | Bulb-type lectin domain profile. | 24 | 150 | IPR001480 | - | |
Amo08g1490 | 811 | ProSiteProfiles | PAN/Apple domain profile. | 341 | 418 | IPR003609 | - | |
Amo08g1490 | 811 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 73 | 183 | IPR036426 | - | |
Amo08g1490 | 811 | SMART | serkin_6 | 494 | 765 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo08g1490 | 811 | CDD | PAN_AP_plant | 337 | 417 | - | - | |
Amo08g1490 | 811 | Gene3D | Hepatocyte Growth Factor | 339 | 416 | - | - | |
Amo08g1490 | 811 | Gene3D | - | 20 | 151 | IPR036426 | - | |
Amo08g1490 | 811 | Pfam | PAN-like domain | 341 | 406 | IPR003609 | - | |
Amo08g1490 | 811 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 615 | 627 | IPR008271 | GO:0004672|GO:0006468 | |
Amo08g1490 | 811 | Gene3D | Phosphorylase Kinase; domain 1 | 467 | 569 | - | - | |
Amo08g1490 | 811 | PANTHER | - | 14 | 807 | - | - | |
Amo08g1490 | 811 | CDD | B_lectin | 30 | 154 | IPR001480 | - | |
Amo08g1490 | 811 | SUPERFAMILY | Protein kinase-like (PK-like) | 477 | 782 | IPR011009 | - | |
Amo08g1490 | 811 | Pfam | D-mannose binding lectin | 73 | 180 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g1490 | Amo-Chr8 | 24422039 | 24425085 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g1490 | 418 | 797 | Receptor kinase-like Gene Family | AT4G23190 | 46.134 | 5.35e-116 | 362 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Amo08g1490 | PK_Tyr_Ser-Thr | 1.9e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g1490 | - | - | aip:107611884 | 1468.37 |