Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1490 ATGCAAAACCAGAAAGTTCTATGCTTTTGGTCCGTTCTGTTCTCATTTATATTAAGAAACTCTACTTCACTAGACAATATAACTCCTGTTCAATCCATCACTGATGGACAAACATTAATTTCGAATGGAGGAACCTTTGAACTTGGCTTCTACAGCCCCGGAAATTCAAATGGCCGATACTTAGGCATATGGTACCATAACATATTCCCTAAGGTAGTGGTATGGGTGGCAAACAGAGAAAAACCCCTCAACAACACCTCCGGAGTTCTAAAAGTCACCGGTGAAGGACTTGTTGTCCTTATTAGTGGCAGCACCAACAGCAGCGTTGTGTGGTCCTCCAACATGTCAAGCAAAGTGGAAGACAAATTGAATCCAGTTGCACAGCTCTTGGAGTCAGGAAACCTTGTTGTCAAAGATGATCATAATGGTGACCACTTTCTGTGGCAGAGCTTTGATTATCCTTGTGATACAATCGTGCCCGGAATGAAGGTGGGATGGGACCTTGTGACAGGTCTAGAGAGGACTATGTCATCTTCGAAAAGTACAGATGATCCCGGCCGCGGAGACTACACAGTTAGAATAGACCTTCGAGGCGATCCGCAAATAGTTCTAATGAATGGAAATGCCACAAGAATTAGAGTAGGGCCATGGAATGGGATAATGTTTTCTGGAGCTACACTTTATTTGCGCTATGACCAATTCTCATCTCAATTTGTTTTCAATGAAAAAGAGGTGTTTGTTAGGTTCAGACCAAATACATCCAAATATATTAGAGGTGTAGTGTACCCTTGGGGAGGTGTTCAGGTTTTGCATTGGTCAATACAAACCAGAGGCTGGGAGACCCTTATTTCTATACCGGAGGCCGAATGTGACAAGTATGCTACTTGTGGTGCAAATTCTATTTGCAGTACTACTCCTACTCCTGTCTGTTCATGCCTTGAAGGATTTGCACCAAAATATCCTGCAAAATGGAAGGAATCTGATTGGCCTGATGGTTGTGTTAGGATCACTCCTTTAAGTTGCAGCAGAGATGGATTCAAGAAGGTCACCGGCATAGTGTTGCCGGATACGTCTGCTTCTTGGTATAACAGGACCATGAACCTGCTGGAATGCAAGGAATTCTGTCTGAAAAATTGTTCTTGTACGGCATATTCCGATTTGGATATCCGTGATGGAGGAAGCGGTTGCTTGATCTGGTTTCATGATCTTGTGGACATTAGACAAGGTTCACAAGATTTCTATATTCGAATAGATGATAAGCAGAACAATGATTCCAGCAAGAGGAAGCTAGCAGTTATCATTGTTGGCTCTATATTGTTCATCACGATCATAATACTTGGACTGAAATCATTTCTATGGAGAAAAAGACTTGAGGAGTCAGATATATTTTGGCTGAGGCAACGTGATCACAAAAAGGAAAAGGAAAACATGGACCTCCCAACATTTGATTTATCAACCATAGTTTGTGCCACTGATCAATTTTCTAGCAGTAATGAATTGGGAAAAGGRGGATATGGACCAGTTTATAAGGGTGTACTTGCAAATGGGACTGAGATTGCCGTAAAGAGACTTTCCAAGAACTCTGACCAAGGACTGCAGGAGTTCAAAACGGAAGTTCAGCTAATTGCAAAACTTCAGCATCGCAACCTCGTAAAGCTTCTTGGTTGTTGCATTCAGCAAGAAGAGAAACTTTTGATTTATGAGCTCATGCCCAACAGGAGTTTGGACTACTTTATTTTTGATGATGCTAGAAGAAAATTATTAGATTGGMCTAAGCGCTTTCACATTATTCGTGGCACAGCTCGAGGCCTAGTCTACCTGCATCAGGACTCTAGGCTAAGAGTCATTCATAGAGATCTAAAAACTAGTAATATTCTTCTTGACAAAGACATGAATGCYAAAATATCAGACTTCGGTCTTGCTAGGACATTTGCATGTGATCAGATTGAAGACAAGACAAAAAGAGTGGTGGGAACTCATGGTTATATTTCGCCCGAYTATGCCGTTCGTGGCTCATTTTCAATGAAATCTGATGTGTTRGCCTTTGGTGTAATCGTGCTTGAGGTAGTCAGTGGGAGGAAGACTAGAGAGTTCTGTGTCCCTAACCGAAGTCTTAACCTTCTTGGATTTGCATGGGAGCTATGGAATGAGGAGAGGACTTTGGAGCTGGTAGATGAATCACTGTGCGATTCGGTGAATCAAGCTGAAGCATCGAGATGCATTCAGATAGGACTGTTGTGTGTGCAAGAGAGACCAGAACATAGGCCAAACATGTCATCTGTAGTTCATATGTTGGATGATGATAAACCATTGCCTCGGCCAAGGCTGCCTGCATTTTATTCACACCAACAACATTCTACACTAATTGATGGTGAAGATGGTGAAGAAGCTCATTCCGCAAATGAGGTTACCATATCATTGTTAGGGGCAAGGTAG 2436 0.4212 MQNQKVLCFWSVLFSFILRNSTSLDNITPVQSITDGQTLISNGGTFELGFYSPGNSNGRYLGIWYHNIFPKVVVWVANREKPLNNTSGVLKVTGEGLVVLISGSTNSSVVWSSNMSSKVEDKLNPVAQLLESGNLVVKDDHNGDHFLWQSFDYPCDTIVPGMKVGWDLVTGLERTMSSSKSTDDPGRGDYTVRIDLRGDPQIVLMNGNATRIRVGPWNGIMFSGATLYLRYDQFSSQFVFNEKEVFVRFRPNTSKYIRGVVYPWGGVQVLHWSIQTRGWETLISIPEAECDKYATCGANSICSTTPTPVCSCLEGFAPKYPAKWKESDWPDGCVRITPLSCSRDGFKKVTGIVLPDTSASWYNRTMNLLECKEFCLKNCSCTAYSDLDIRDGGSGCLIWFHDLVDIRQGSQDFYIRIDDKQNNDSSKRKLAVIIVGSILFITIIILGLKSFLWRKRLEESDIFWLRQRDHKKEKENMDLPTFDLSTIVCATDQFSSSNELGKGGYGPVYKGVLANGTEIAVKRLSKNSDQGLQEFKTEVQLIAKLQHRNLVKLLGCCIQQEEKLLIYELMPNRSLDYFIFDDARRKLLDWXKRFHIIRGTARGLVYLHQDSRLRVIHRDLKTSNILLDKDMNAKISDFGLARTFACDQIEDKTKRVVGTHGYISPDYAVRGSFSMKSDVLAFGVIVLEVVSGRKTREFCVPNRSLNLLGFAWELWNEERTLELVDESLCDSVNQAEASRCIQIGLLCVQERPEHRPNMSSVVHMLDDDKPLPRPRLPAFYSHQQHSTLIDGEDGEEAHSANEVTISLLGAR* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1490 811 Gene3D Transferase(Phosphotransferase) domain 1 570 771 - -
Amo08g1490 811 Pfam S-locus glycoprotein domain 213 319 IPR000858 GO:0048544
Amo08g1490 811 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 14 807 - -
Amo08g1490 811 Pfam Protein tyrosine and serine/threonine kinase 497 765 IPR001245 GO:0004672|GO:0006468
Amo08g1490 811 SMART blect_4 30 154 IPR001480 -
Amo08g1490 811 CDD STKc_IRAK 500 766 - -
Amo08g1490 811 PIRSF SRK 2 811 IPR024171 GO:0004674
Amo08g1490 811 SMART ntp_6 341 417 IPR003609 -
Amo08g1490 811 ProSiteProfiles Protein kinase domain profile. 494 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1490 811 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Amo08g1490 811 ProSiteProfiles PAN/Apple domain profile. 341 418 IPR003609 -
Amo08g1490 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Amo08g1490 811 SMART serkin_6 494 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1490 811 CDD PAN_AP_plant 337 417 - -
Amo08g1490 811 Gene3D Hepatocyte Growth Factor 339 416 - -
Amo08g1490 811 Gene3D - 20 151 IPR036426 -
Amo08g1490 811 Pfam PAN-like domain 341 406 IPR003609 -
Amo08g1490 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Amo08g1490 811 Gene3D Phosphorylase Kinase; domain 1 467 569 - -
Amo08g1490 811 PANTHER - 14 807 - -
Amo08g1490 811 CDD B_lectin 30 154 IPR001480 -
Amo08g1490 811 SUPERFAMILY Protein kinase-like (PK-like) 477 782 IPR011009 -
Amo08g1490 811 Pfam D-mannose binding lectin 73 180 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1490 Amo-Chr8 24422039 24425085 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1490 418 797 Receptor kinase-like Gene Family AT4G23190 46.134 5.35e-116 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1490 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1490 - - aip:107611884 1468.37