Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1489 ATGGAAGCCTTTAGCTTTCTTCTGTTATGCTTCTCTCTGCTGGATTTAACAGCATTTTGTGTTGCAAGAGACACAATTACCACACTGCAATCTATAAGTGATGGTGACACATTAGTTTCAGCAGATGAAACCTTTGCATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCATTATGTTGGAATTTGGTATAACAAAGATCCAACAAAGGCAATAGTATGGGTTGCAAACAGAGAAAACCCCCTCACTGACTCATCAGGGGTTTTGAAGGTCAACAACACCGGAATTCTAGTCCTTCTTGATAGTAATAATAGTCTTATTTGGTCATCCAACACCACACGATCGGCACAAAATCCAGTTGCAAAGCTTTTGAATTCTGGGAATTTTGTTGTGCAGGATGACACCAACAGTGACACGGAAGATTTTCTGTGGCAAAGTTTTGACTATCCAGGCGACACAATCTTGCCTGGACAGAAGTTTGGAAGAAACTTAGCTACAGGATTAAATTGGTTGATAACATCATGGAAAAGCTCTGATGATCCCTCTCAAGGTAGCTTTAGCTATCAATTCGACATTGATGGATATCCGCAATTAGTATTAAGAGAAGGCACAACAAAAAGATTTCGTTTTGGATCATGGAATGGTATTCAGTTTAGTGGGGGACCACAGTTGAAAAATGACTCTGTATTTAGATTTAGCATGATTTCTAATGAGCAAGAGGTATATTATGTATATTGGCTTGTTGATAATTCAGTGCATCAAAGGTTGCAGGTAACATCGGACGGATTCAGCCACCGGACAAGTTGGAGTGGTGGAAATACAGGTTGGACCACAGTTTCGCACTTACCGGTGGATGACTGTGATTATTATGGAAAATGTGGAGCATATGCTAGTTGTGATACAAACAGTTTTCCCATGTGTAATTGCCTGGATGGTTTTGTACAGAAAACAACTGATTCATCAAGTGGTTGTGTTAGGAGAACTTCATTGAGTTGCAATCATTCAGATGGGTTTGTGAAGTTTTCGGGGCTAAAGTTACCAGACACTGAAGGGACATGGTTTAATAGAAGCATGAGACTTGAGGATTGTAGGATCTTGTGCTGGAACAATTGCTCTTGTATGGCTTATGCAGCTTTGGATGTCAGCAAAGGGCCAAATGGTTGTTTACTTTGGTTTGGTAATCTTGTAGATATGAAAGCGTTGAGTGCATCGGATGAAGATATTTATATAAGGATGGCAGGCAAAGATGTAGAAGCTATTGAACAAAACAGATCACAGAAGTCCAAGAAACGGAAGCGAAAGATTATTATTGCCGTAAGCTGTGTGTTGTCTTTTGGAATTTTGATCCTATGCTTGGCCTTCATCTATAGATGGAAGAAGCATCTGAAAGGAAAGATTAAAGAAGAAACAGAATCAGGTGCAATAAATAGTCACCATGATGAGGATGATCTGGAACTGCCCTTATTTGATATGTGCACAATTACTTCTGCAACAAGTAATTTTTCAAGTGACAATATACTAGGGACAGGTGGTTTTGGATCAGTTTATAAGGGTATCTTGGAAGATGGGCAGGAYATAGCTGTCAAGCGACTTTCGCAGAATTCAAGTCAAGGACTCCAAGAGTTCAAAAATGAAGTTATGCATATTGCTAAACTTCAGCACCGAAATTTAGTGAAGCTATTAGGGTGCTGCATTCAAGCAGGCGAGAGAATGTTGATTTATGAATTTATGCACAACAAAAGCTTGGACTTCTTTATATTTGATTGTGAGAGGGGAAAACTACTAGACTGGCCAAGGCGTTTTCTTATTATTAATGGAATTGCTAGAGGCTTGCTTTATCTTCATCAAGATTCAAGATATAGAATAGTTCATAGAGATCTTAAGGCTGGGAATGTTTTGTTAGATGACGAATTGAATCCTAAAATCTCAGACTTTGGACTAGCACGAAACTTCGTAGGAAATGAAAACCAAGCAAAAACAAGTCATATTGTTGGGACTTACGGCTATCTGTCACCGGAGTGCATAGTTGACGGGATATACTCAACAAAATCTGATGTCTACAGCTTCGGAGTGCTGGTGTTAGAGATAGTTAGTGGGAAGAGAAACAGAGGATTCATCCATATTGATCACAATTTGAATCTTCTTGGGCATGCATGGACACTTTTCACAGAAGGCAAGTGCTTAGAAATAGTCGATGCATCTATCAAAGACTCTATTGATTTGCCAGAAGTCCTAAGATCAATTCATGTTGGTCTACTATGTGTGCAACGAAATCCAGAAGATCGACCAAGCATGTCGTATGTGCTTATGATGCTGAGTAGTGAATGGGCATTGCCTCAGCCAAAGAAGCCCGGATTCTTTATTGAGAGAGATGTGTCACCCAAGTCTGTCCGCGATAGATTTTGGTTCAAAATTGATAAGCTCAAGGATGACCACAATGATAAGCCAATTCCATATACAATAGTAAACAGATACAGCGCTTCACGACATACACAAGCGTATTATTGGCACCGCTACGAAGAGCATATACACAATTCGATGGAAGCATTTAGCTTTCTCTTATTTTGCTTCTCTCTGCTTATGGCTGTCTCTATTGCAAGAGACACAATCAACACACTGCAATCAATAAGTGATGGTGAGATATTAGTTTCAGCAGATGAAACCTTTGCGTTGGGATTCTTCAGCCCTGGAACTTCCAATAACCGTTATGTCGGAATTTGGTATAACAAAGATCCAACAAAGGCAATAGTATGGGTTGCAAACAGAGAAAAACCCCTCACTGACTCCTCAGGGGTTTTGAAGGTCAACGACATCGGAATTTTAGTCCTTCTTGATAGTAATAATAGTCTTATTTGGTCATCCAACACGACGCGATCGGCACAAAATCCGGTTGCAAAGCTTTTGAATTCTGGGAATTTTGTTGTGCAGGATGACAGCAATAGCGACACGGAAGATTTGCTGTGGCAAAGTTTTGACTATCCAGGCGACACAATCTTGCCTGGACAGAAGTTGGGAAGAAACTTAGCTACAGGACTAAATCGGAGGACAACATCATGGAAAAGCTCTGATGATCCTTCTCAAGGTAGCTTTAGCTATCAATTCGATATTGATGGATATCCGCAATTAGTATTAAGAGAAGGCACAACAAAAAGATTCCGTTTTGGATCATGGAATGGTATTCAATTTAGTGGGGCACCTCAATTGAAAAATGAGTCTGTATTCAGATTTAGCATGATTTCTAATGAGGAAGAGGTGTATATTGTATATTGGAWTGTTGATAGTTCAGTTCATCAGAGGCTGCAGATAGCAATGGATGGATTCAGCCAGCGGAGAAGTTGGAGTGGTGGAAATACAGGTTGGACCACAGTTTCGCACATACCGGTGGATGACTGTGATTATTATGGAAAATGTGGAGCATATGCTAGTTGTGATACAAACCATTTTCCAATGTGTGGATGCTTAGATGGATTTGTGCAGAATACTATTGACTCATCAAGTGGTTGTGTTAGGAYAACCTCATTAAGTTGCAATAARTCAGARGGGTTTGTGAAGTTTTCYGGGCTAAAATTACCAGACACAAAAGGAACTTGGTTTAATACAAGTATGAGTTTTGAGGATTGTAGGATTTTGTGCTTGAAAAACTGCTCTTGTACGGCTTATGCAGCTTTGGATGTCAGCAAAGGGCCAAATTCAAATGGTTGTTTACTTTGGTTTGGAAAGCTGATGGATATGAAAGTGATGACTGCATCTGAAGATATTTATGTAAAGATGGCAGGGAAAGATGTAGAAGCAATTGTGCGAAAAAGATTGCCGAAGTTCAAGAAAAAGAAGCAAAAGATTACCACTGCCATAATCTGGGTGTTGTCTTCTGGAATTTTGATCTTATGCTTGGCCATCATCATTTATAGATGGGAGATGCGTAAGAAAGGAAAGATAAAAGAAGACAGAGAATCAGATGATAGTCAGCATGATGAGGAAGATCTAGAATTGCCCTTATTTTCTATAAATACGGTTACTTCTGCAACAAACAATTTTTCAACTGACAACTTATTAGGGACAGGTGGTTTTGGACCAGTTTATAAGGGTATCTTGGAAGATGGACAGGAAATAGCTGTCAAGAGGCTTTCGAAGAATTCAAGCCAAGGATTTGAAGAGTTCAAAAATGAAGTTATGCATGTTTCCAAACTTCAGCACAGGAATTTAGTAAGGCTACTAGGGTGCTGCATTCAAGCTGGGGAAAGATTGTTGATTTATGAATTTATGAGCAACAAAAGCTTGGACTTCTTCATATTTGGTTTGATTCCTGCTGAACCATACTCTTCTTTTCATTTAAGAATGATTATGCAACTCTTAAAACCTCATTAG 4365 0.3938 MEAFSFLLLCFSLLDLTAFCVARDTITTLQSISDGDTLVSADETFALGFFSPGTSKNHYVGIWYNKDPTKAIVWVANRENPLTDSSGVLKVNNTGILVLLDSNNSLIWSSNTTRSAQNPVAKLLNSGNFVVQDDTNSDTEDFLWQSFDYPGDTILPGQKFGRNLATGLNWLITSWKSSDDPSQGSFSYQFDIDGYPQLVLREGTTKRFRFGSWNGIQFSGGPQLKNDSVFRFSMISNEQEVYYVYWLVDNSVHQRLQVTSDGFSHRTSWSGGNTGWTTVSHLPVDDCDYYGKCGAYASCDTNSFPMCNCLDGFVQKTTDSSSGCVRRTSLSCNHSDGFVKFSGLKLPDTEGTWFNRSMRLEDCRILCWNNCSCMAYAALDVSKGPNGCLLWFGNLVDMKALSASDEDIYIRMAGKDVEAIEQNRSQKSKKRKRKIIIAVSCVLSFGILILCLAFIYRWKKHLKGKIKEETESGAINSHHDEDDLELPLFDMCTITSATSNFSSDNILGTGGFGSVYKGILEDGQDIAVKRLSQNSSQGLQEFKNEVMHIAKLQHRNLVKLLGCCIQAGERMLIYEFMHNKSLDFFIFDCERGKLLDWPRRFLIINGIARGLLYLHQDSRYRIVHRDLKAGNVLLDDELNPKISDFGLARNFVGNENQAKTSHIVGTYGYLSPECIVDGIYSTKSDVYSFGVLVLEIVSGKRNRGFIHIDHNLNLLGHAWTLFTEGKCLEIVDASIKDSIDLPEVLRSIHVGLLCVQRNPEDRPSMSYVLMMLSSEWALPQPKKPGFFIERDVSPKSVRDRFWFKIDKLKDDHNDKPIPYTIVNRYSASRHTQAYYWHRYEEHIHNSMEAFSFLLFCFSLLMAVSIARDTINTLQSISDGEILVSADETFALGFFSPGTSNNRYVGIWYNKDPTKAIVWVANREKPLTDSSGVLKVNDIGILVLLDSNNSLIWSSNTTRSAQNPVAKLLNSGNFVVQDDSNSDTEDLLWQSFDYPGDTILPGQKLGRNLATGLNRRTTSWKSSDDPSQGSFSYQFDIDGYPQLVLREGTTKRFRFGSWNGIQFSGAPQLKNESVFRFSMISNEEEVYIVYWXVDSSVHQRLQIAMDGFSQRRSWSGGNTGWTTVSHIPVDDCDYYGKCGAYASCDTNHFPMCGCLDGFVQNTIDSSSGCVRXTSLSCNKSEGFVKFSGLKLPDTKGTWFNTSMSFEDCRILCLKNCSCTAYAALDVSKGPNSNGCLLWFGKLMDMKVMTASEDIYVKMAGKDVEAIVRKRLPKFKKKKQKITTAIIWVLSSGILILCLAIIIYRWEMRKKGKIKEDRESDDSQHDEEDLELPLFSINTVTSATNNFSTDNLLGTGGFGPVYKGILEDGQEIAVKRLSKNSSQGFEEFKNEVMHVSKLQHRNLVRLLGCCIQAGERLLIYEFMSNKSLDFFIFGLIPAEPYSSFHLRMIMQLLKPH* 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1489 1454 Gene3D Phosphorylase Kinase; domain 1 475 576 - -
Amo08g1489 1454 Gene3D Phosphorylase Kinase; domain 1 1318 1420 - -
Amo08g1489 1454 Pfam PAN-like domain 1176 1244 IPR003609 -
Amo08g1489 1454 Pfam PAN-like domain 332 398 IPR003609 -
Amo08g1489 1454 SUPERFAMILY Protein kinase-like (PK-like) 1326 1437 IPR011009 -
Amo08g1489 1454 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Amo08g1489 1454 ProSiteProfiles PAN/Apple domain profile. 1176 1258 IPR003609 -
Amo08g1489 1454 CDD PAN_AP_plant 328 413 - -
Amo08g1489 1454 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Amo08g1489 1454 Pfam S-locus glycoprotein domain 1052 1160 IPR000858 GO:0048544
Amo08g1489 1454 CDD STKc_IRAK 507 772 - -
Amo08g1489 1454 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Amo08g1489 1454 Pfam D-mannose binding lectin 916 1020 IPR001480 -
Amo08g1489 1454 Pfam D-mannose binding lectin 72 176 IPR001480 -
Amo08g1489 1454 SUPERFAMILY alpha-D-mannose-specific plant lectins 916 1025 IPR036426 -
Amo08g1489 1454 ProSiteProfiles Protein kinase domain profile. 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1489 1454 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 181 IPR036426 -
Amo08g1489 1454 Gene3D Hepatocyte Growth Factor 329 410 - -
Amo08g1489 1454 SMART ntp_6 1177 1257 IPR003609 -
Amo08g1489 1454 SMART ntp_6 333 412 IPR003609 -
Amo08g1489 1454 Pfam Protein tyrosine and serine/threonine kinase 1348 1430 IPR001245 GO:0004672|GO:0006468
Amo08g1489 1454 Pfam Protein tyrosine and serine/threonine kinase 504 770 IPR001245 GO:0004672|GO:0006468
Amo08g1489 1454 PANTHER - 12 793 - -
Amo08g1489 1454 PANTHER - 856 1431 - -
Amo08g1489 1454 Gene3D - 861 991 IPR036426 -
Amo08g1489 1454 Gene3D - 19 147 IPR036426 -
Amo08g1489 1454 SMART blect_4 29 150 IPR001480 -
Amo08g1489 1454 SMART blect_4 873 994 IPR001480 -
Amo08g1489 1454 SUPERFAMILY Protein kinase-like (PK-like) 486 772 IPR011009 -
Amo08g1489 1454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Amo08g1489 1454 SMART serkin_6 501 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1489 1454 ProSiteProfiles Bulb-type lectin domain profile. 867 988 IPR001480 -
Amo08g1489 1454 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 793 - -
Amo08g1489 1454 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 856 1431 - -
Amo08g1489 1454 CDD B_lectin 874 994 IPR001480 -
Amo08g1489 1454 Gene3D Transferase(Phosphotransferase) domain 1 577 779 - -
Amo08g1489 1454 CDD B_lectin 30 150 IPR001480 -
Amo08g1489 1454 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Amo08g1489 1454 ProSiteProfiles Protein kinase domain profile. 1345 1454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1489 1454 CDD PAN_AP_plant 1172 1258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1489 Amo-Chr8 24402230 24417362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1489 489 801 Receptor kinase-like Gene Family AT4G23290 55.556 8.25e-111 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1489 PK_Tyr_Ser-Thr 8.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1489 - - vvi:100262430 1495.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1374 18 25145451 25148682 Amo08g1489 08 24402230 24417362 hybridization