Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1485 ATGGAAAAGTTCACCTTTCTTCTGTTGTGCTTCTTATTGCTGCATGATATAGCCGTTTCCACTGCCATAGAAAGCATTAGTATTACACGGTCCCTCACTGATGGTGACACCATGGTTTCAGCCGGTGGAACCTTTGCAGTTGGATTCTTAAGTATTCCAGAAAGTTCCAAGAACCGTTACCTTGGGATATGGTACAATAAAGTGCCATCTAACACAGTAGTATGGATTGCCAATAGAAACACTCCACTTAATGACTCGTCCGGGGTCTTGAAGTTCACTGGCAATGGAACTCTTGCTCTTCATACTCATAACGATACCATCATTTGGCATTCCAACTCATCAAGATTCGCGCAGCGACCAGTTGTTGCAGTGCTTTTGGAGTCAGGGAACCTGGTTGTGAAGGAAGATGGGAGCAATGATGATGATTTGAAGAGTTTCATTTGGCAGAGTTTTGATTACCCTTATGACACGCTACTGCCAGGGATGAAACTGGGAAGTGACTTAACTACAGGCCTTACCAGGTACCTAATATCGCAGATTAGTTCTGATGATCCTTCTGAAGGTAGCTATACTTATCAGCTTAATATTGTTGGATATCCTCAATTATGTATAAAAAATGGCCAATCCGTGACATATAGTAGTGGATCTTGGAACGGTCTTCGGTTTGGTGGAATTCCCCAGTTAAAACATAATAATTTTTACAACTTTTACTTTGTTTACAACAAGGAAGAGATATATTACACATATGAGCTTGTCAATAACGCTGTATATACAAGGTCCGTGCTATCTGCAGACGGATCAGTGAATCGTTATGTGTGGAGTGTTACGAATAAGAGCTGGAGTCCCTATCTAACAATACCAACTGATATCTGTGATTATTATGGTAAATGTGGAGCATATGGTATCTGTAATGTAGCCAATTCCCCTGTATGTAGTTGCTTATTGAACGGATTCGAACCTAAAGTCCCTGAAGAATGGAATCAGGCAGATTGGTCTAATGGTTGTGTTAGAATCAACAAATTGAGTTGCCAGGATGATGGATTTGTAAAGTTGTCTGGTTTAAAGTTACCAAACACACAAAGAGCATCATGGTTAAATAATAGCATGAGTCTTGATGAGTGTGCTAATCTATGCATGAAGAATTGTTCCTGCAAGGCTTATGCTGCTTTTGATATCAGGGAAGAAGGAAGAGGGTGTTTATTCTGGTATGATGAGCTGATAGATATTAGAGTGCTGAGTGATCCACAGCAAGATCTTTATGTCAGAATGTCAAGGAAAGATATAGGAAACATGAGAGACAGTCCAGAAAGATATGCACGTGTAATACAAGAGCATCAGGAGGAAGAACTAGAACTACCACTGTTTGATATGGCTACACTTATTGCTGCAACCAATAACTTCTCCACCAGTAACATATTAGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGAAAGATGGAAGAGAAATAGCAGTTAAGAGGCTCTCAGTACATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTGTTGAATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGGTGTTGCATTCAAGCAGAAGAAAGAATGCTGGTCTATGAATATATGCCAAATAAAAGCTTGGACTACTTCATATTTGATAAAGAGAGAAGCATGCAATTAGTTTGGTCTCAGCGTTTCCTTATTATCATTGGGATTGCACGGGGCATTCTCTATCTCCATCAAGATTCAAGACATCGAATAGTTCATAGAGATCTCAAGGCTAGCAATATTCTGCTAGATGATGAAATGAATGCCAAAATCTCTGATTTTGGACTAGCTAGAAGCTTTATTGGAAATGAAAATGAAGCAAACACAACAACAATTGTCGGAACTTATGGTTATGTATCACCAGAGTACCTAATTGATGGAATTTTCTCAACAAAGTCTGATGTTTATAGCTTCGGTGTGCTTGTATTAGAGATAGTAAGTGGAAAAAGAAATAGAGGGTTCAGCAACAGAAATCATCGCTTTAATCTTCTGGGGCATGTATGGAAACTCTTTATAGAAGGTAATTGCTCTGAAATAGTTGATCCGTCCATCAGAAATTCGTCCGATTTATCCGGAGTCATAAGAGCAATTCATGTGGGTCTACTTTGTGTTCAACAGAATCCAGAAGACAGGCCAAGCATGTTGCATGTTCTTATGATGCTAAGTAGCGAATGCACATTGCTTCAACCAAAAATGCCAGGGTTCTTCACTGAGAGAGATCTTGTTGGTGACACTTCATCAAGCAAGAGTGAACTAGTGTCATTTAATGAAATCACAGTTAGTGTGGTGCATCCACGGTAG 2352 0.3954 MEKFTFLLLCFLLLHDIAVSTAIESISITRSLTDGDTMVSAGGTFAVGFLSIPESSKNRYLGIWYNKVPSNTVVWIANRNTPLNDSSGVLKFTGNGTLALHTHNDTIIWHSNSSRFAQRPVVAVLLESGNLVVKEDGSNDDDLKSFIWQSFDYPYDTLLPGMKLGSDLTTGLTRYLISQISSDDPSEGSYTYQLNIVGYPQLCIKNGQSVTYSSGSWNGLRFGGIPQLKHNNFYNFYFVYNKEEIYYTYELVNNAVYTRSVLSADGSVNRYVWSVTNKSWSPYLTIPTDICDYYGKCGAYGICNVANSPVCSCLLNGFEPKVPEEWNQADWSNGCVRINKLSCQDDGFVKLSGLKLPNTQRASWLNNSMSLDECANLCMKNCSCKAYAAFDIREEGRGCLFWYDELIDIRVLSDPQQDLYVRMSRKDIGNMRDSPERYARVIQEHQEEELELPLFDMATLIAATNNFSTSNILGKGGFGTVYQGMLKDGREIAVKRLSVHSRQGLQEFKSEVLNVVKLQHRNLVKLLGCCIQAEERMLVYEYMPNKSLDYFIFDKERSMQLVWSQRFLIIIGIARGILYLHQDSRHRIVHRDLKASNILLDDEMNAKISDFGLARSFIGNENEANTTTIVGTYGYVSPEYLIDGIFSTKSDVYSFGVLVLEIVSGKRNRGFSNRNHRFNLLGHVWKLFIEGNCSEIVDPSIRNSSDLSGVIRAIHVGLLCVQQNPEDRPSMLHVLMMLSSECTLLQPKMPGFFTERDLVGDTSSSKSELVSFNEITVSVVHPR* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1485 783 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Amo08g1485 783 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Amo08g1485 783 SUPERFAMILY Protein kinase-like (PK-like) 450 738 IPR011009 -
Amo08g1485 783 ProSiteProfiles Bulb-type lectin domain profile. 23 146 IPR001480 -
Amo08g1485 783 SMART ntp_6 343 423 IPR003609 -
Amo08g1485 783 PANTHER - 11 780 - -
Amo08g1485 783 PIRSF SRK 1 443 IPR024171 GO:0004674
Amo08g1485 783 PIRSF SRK 430 783 IPR024171 GO:0004674
Amo08g1485 783 CDD STKc_IRAK 473 738 - -
Amo08g1485 783 Gene3D Phosphorylase Kinase; domain 1 430 542 - -
Amo08g1485 783 Pfam Protein tyrosine and serine/threonine kinase 470 735 IPR001245 GO:0004672|GO:0006468
Amo08g1485 783 SMART blect_4 29 154 IPR001480 -
Amo08g1485 783 ProSiteProfiles Protein kinase domain profile. 467 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1485 783 Pfam Domain of unknown function (DUF3403) 740 783 IPR021820 GO:0004674
Amo08g1485 783 CDD B_lectin 29 154 IPR001480 -
Amo08g1485 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Amo08g1485 783 SMART serkin_6 467 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1485 783 Pfam D-mannose binding lectin 72 178 IPR001480 -
Amo08g1485 783 Pfam PAN-like domain 343 409 IPR003609 -
Amo08g1485 783 ProSitePatterns Protein kinases ATP-binding region signature. 473 495 IPR017441 GO:0005524
Amo08g1485 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Amo08g1485 783 Gene3D - 18 151 IPR036426 -
Amo08g1485 783 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 11 780 - -
Amo08g1485 783 CDD PAN_AP_plant 340 422 - -
Amo08g1485 783 Gene3D Hepatocyte Growth Factor 341 422 - -
Amo08g1485 783 Gene3D Transferase(Phosphotransferase) domain 1 543 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1485 Amo-Chr8 24313233 24316989 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1485 455 783 Receptor kinase-like Gene Family AT4G11530 54.599 5.79e-115 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1485 PK_Tyr_Ser-Thr 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1485 - - ahf:112769711 1473.76