Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1483 ATGCATCTATCAGAGACTCAATTAATTTACCAGAATCGAGAGGATCAGCCAAGCATGTCATACGTGCTTACGATGCTGAGTAGTGAATGGGCATTGCCTCAACCAAAAAAGCCTGGATTCTTCACTCAGAGAGATTTGGTTGGTGGCAGTTCTTCCTCAAGCAACAGCAACAACAAAGTATTGTCAATTAATAAACTCTCAGTTAGTGAGATTGATCCACGACTGCCGTGTACTTGCATTTCAGCTTCTGGTTCTTTATCTATAAATCCTCAAACTTTAACAGCTTTATTACCAACTAAAGCTACAAAAATTAAAACAAAATACATCAAAATAATAATGGAACGGTTCACCTTGCTTCTGTTATGCTTCTCATTGCTGCATCATACAGCTATTTCTACAATCATAGACACTATTAGTACTACACAGTACCTCACTGATGGTGACACCATGCTTTCAGCTGATGAAAACTTTGCACTTGGATTCTTCGGTATACCAGAAAGTTCCATGAACCGTTACCTTGGAATATGGTACTATAAAGTGCCAACTAGGACAGTGGCATGGGTTGCCAACAGAAACACTCCACTTAATGACTCATCTGGAATCTTGAAGATCACTGACAAAGGAATTCTTGCTCTTCATAGTCATAACAATGCCATCATTTGGCATTCCAACTCGTCAAGATTCGTTCAGCGACCGGTTGCAGTGCTTTTGGATTCAGGGAACCTCATTGTGAAGGAATATGGGAGCAACAACAATGACTTAAAAAGCTTTCTTTGGCAGAGTTTCGATTACCCTTTTGACACAATGCTGCCAGGGATGAAGTTCGGAAGCGACTTAAGTACAGGCTTGAATAGGTACTTAACATCTCAAATTAGCCCCGATGATCAATCTAAAGGTAACTATACTTTTCAGCTTGATATTGTTGGATATCCAGAATTATGTATAAGAAACGGTGAATCCAAGTCCTTTTCTAGTGGATCCTGGAATGGTCTTCGATTTGGTGGAATTCCCCGGTTAAAACAGAATACTATATACCACTACTACTTTGTTTACAGTAAGGAAGAGATATATTATACATTTGAGCTTCTTAATAGCTCAATGTATTCAAGATTTGTGCTATCTGCGAATGGAATCATGACACGTTATGTTTGGAGTTTGAGGAATCAAAGTTGGACACCCTACCTAACATTGCCAAATGATATCTGTGATAGTTATGGTAAATGTGGACCATATGGTAAATGTAATATAGACAACTCCCCTCCATGTGATTGCTTGAGCGGAACTGTACCTAAAGTCCCTGAAGAATGGAATCAGGCAGATTGGTATAATGGTTGTATTAGAAGTAATCCGCTAAGTTGCCATGGAGATGGATTCAAAAAGTTTACTGGTCTGAAGCTGCCTGATACACAGAAAGCATCATGGTTAAATACTAGCATGAGTCTTGACGAGTACGCGAAGTTCTGCCTGAAAAATTGCTCCTGCATGGCTTATGCTGCATTGGATATCAGCAAAGGGGCAAGTGGGTGTTTAATGTGGCATGATGAGCTGATAGATATTAGAGTGCTGAGTGATCCACAACAAGATCTTTATGTTAGAATGTCCAAGAAAGATTCAGATGAAGATGAAAAGTCAAAGGGTAGATCTGATATCCCGAAGATGCAGATTATTGTTTCCAGCTCAGTCTTATTTATAGGAATGATGATGATCCTATGCATTTCCTTGATCCTGTATAGAAGAAAGAAAAACCAGAAAAACTATAGGAACATGAGAGGCAACCCAGAAGAGCATCAGGAGGAAGAACTAGATCTACCATATTTTGATATGGCTACACTTATTTCTGCAACCAACAACTTCTCCACCAATAACATATTGGGAAAAGGCGGTTTTGGAGCTGTTTACAAGGGTGTGTTGGAAGATGGAAGAGAAATAGCAGTTAAGAGGCTTTCAGAAGATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTTATGCATGTAGTCAAACTTCAGCACAGGAATTTGGTGAGGCTTCTAGGATGTTGCATTCAAGCAGAGGAGAGGATTCTAGTCTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGACAGAGGCAAGATATTAGACTGGCCTAAGCGGTTCATTATTATAATTGGGATTGCACGAGGCCTTCTCTACCTCCATCAAGATTCAAGACATAGAATAGTCCATAGAGATCTTAAGGCTGGCAATGTTTTGTTAGATGAGGAAATAAATGCGAAAATCTCTGACTTTGGACTAGCCAGAACCCTTGTAGGAAATGAAAATGAAGCAAACACGGCAACTGTTGTCGGAACTTATGGCTATCTATCTCCAGAGTACCTTATCGATGGAATATTCTCAACAAAATCTGATGTCTATAGCTTCGGAGTGCTGGTGTTAGAGATAGTTACTGGAAAGAGAAATAGAGGCTTCAACAATAAAAATCATGGTTTTAATCTTCTCGGACATGTTTGGACTCTCTTCATAGATGGTAAGTGTTTAGAAATAGTTGATGGATCAATCAGAGATGATGACGCATCGAATTTATGTGGAGTCATAAGAGCGATTCATGTTGGTCTACTATGCGTCCAAAGAAGTCCAGAGGATAGGCCAAGCATGTCACATGCGCTTATGATGTTGAGTAGTGAATGGCGACTGCCTCGACCGAAAATGCCAGGCTTCTTTACTGAGAGAGATCCTGTTGGTGACACTTCTTCATCAGGCAACACTAAAGTAGTGTCAATTAATGAAGTCACAATTACCGTTTCCACTGCCATAGAAAGCATCAGTATTACCCAGTCCCTCACTGATGATGACACCATGGTTTCAGCCGGTGGAACCTTTGTAGTTGGATTCTGCAGTATCCCAGAAAGTTCCAAGAACCGTTACGTTGGAATATGGTACAGTAAAGTGCCATCTAGGACAATAGTATGGATTGCCAATAGAAACACTCCACTTAATGACTCATCCGGGGTCTTGAAGATCACTGGCAATGGAACTCTTGCTCTTCATAGTCATAACCATCATTTGGCATTCCAACTCATCAAGATTCGCGCAGCGGCCGATGGGAGCAATGATGATGATTTGAAGAGCTTTATTTGGCAGAGTTTTGATTACCCTTATAACACGCTACTGCCGGGGATGAAACTGTACCTAATATCACCGATTAGTTCTGATGACCCTTCTGAAGGTAGCTATACTCACCAGCTTAATATTGTTGGATATCCTCAATTATGTACAAAAGATGGCCAATCCATGACATTTAATGGTGGATCTTGGAATGGTCTTCGGTTTGGTGGAATTCCCCACAAGGAAGAGATATATTACACATATGAGCTTGTCGATAGTGCTGTATATTCAAGGAGTGTGCTATCTGCAGACGGATCAATGACTCGTTATGTGTGGAGTGTTACAAATAAGAGTTGGAGTGTCTATTTAAAATTGCCAACTGATATCTGTGATGATTATGGTAAATGTGGAGCATATGGTATCTGTAATGTAGCCAATTCCCCTGTATGTAGTTGCTTATTGAACCGATTCGAACCTAAAGACCCTGAAGAATGGAATCAGACAGGTTGGTTTAATGGCTGTGTTAGAATCAATAAATTGAGTTGCCAGGATGATGGATTTGTAAAGTTGTCTGGTTTAAAGTTACCAAACACACAAAGAGCATCATGGTTAAATAATAGCGTGAGTCTTGAGGAGTGTGCTAATCTATGCATGAAGAATTGTTCCTGCACGGCTTATGCTTCCTTGGATATCAGGAATGGAGGAACAGGGTGTTTATTCTGGTATGATGAGCTGATAGATATCAGAGTTCTGAGTGATCCACAGCAAGATCTTTTTGTCAGAATGTCAAGGAAAGATATAGATGAAATTAAGAAGTCATCACATAAATCCAAGATCAGGAAGCTGCAGATTATTGCCGCCATCACAGTCATATCTATAGGAATTTTGATCTTATGCCTATCCTTCATGCTATACAGAAGAAAGAAGCAGCAGATAAACTATAGAAACATGAGGGACAGTCCAGAAAGATATGCACATGTAATACAAGAGCATCAGGAGGAAGAACTAGAACTACCACTGTTTGATATGGCTACACTTATTGCTGCAACCAATAACTTCTCCACCAGTAACATATTAGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGAACGATGGAAGAGAAATAGCAGTTAAGAGGCTCTCAGTAAATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTGTTGAATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGGTGTTGCATTCAAGAAGAAGAAAGGATGCTGGTCTATGAATATATGCCAAATAAAAGCTTGGACTACTTCATATTTGGTTTAGAGAGCATGCAACTAGTTTGGTCTCAGCGTTTCCTTATTATCATTGGAATTGCACGGGGCGTTCTCTATCTCCATCAAGATTCGAGACATCGAATAGTTCATAGAGATCTCAAGGCTAGCAATATTCTGCTAGACGATGAAATGAATGCCAAAATCTCTGATTTTGGACTAGCCAGAAGCTTTATTGGAAATGAAAATGAAGCAAACACAACAACAATTGTTGGAACTTATGGTTATGTATCACCAGAGTACCTAATTGATGGAATTTTCTCAACAAAGTCTGATGTTTATAGCTTCGGTGTGCTTGTATTAGAGATAGTAAGTGGAAAAAGAAATAGAGGGTTCAGCAACAGAAATCATCGCTTTAATCTTCTGGGGCATGTATGGAAACTCTTTATAGAAGGTAATTGCTCTGAAATAGTTGATCCGTCCATCAGAAATTCGTCCGATTTATCCGGAGTCATAAGAGCAATTCATGTGGGTCTACTTTGTGTTCAACAGAATCCAGAAGACAGGCCAAGCATGTTGCATGTTCTTATGATGCTAAGTAGCGAATGCACATTGCTTCAACCAAAAATGCCAGGGTTCTTCACTGAGAGAGATCTTGTTGGTGACACTTCATCAAGCAAGAGTGAACTAGTGTCATTTAATGAAATCACAGTTAGTGTGGTGCATCCACGAAAATTTTTTTCTTTTAATTTTTTTAAAACTCGCACATACTAA 5142 0.395 MHLSETQLIYQNREDQPSMSYVLTMLSSEWALPQPKKPGFFTQRDLVGGSSSSSNSNNKVLSINKLSVSEIDPRLPCTCISASGSLSINPQTLTALLPTKATKIKTKYIKIIMERFTLLLLCFSLLHHTAISTIIDTISTTQYLTDGDTMLSADENFALGFFGIPESSMNRYLGIWYYKVPTRTVAWVANRNTPLNDSSGILKITDKGILALHSHNNAIIWHSNSSRFVQRPVAVLLDSGNLIVKEYGSNNNDLKSFLWQSFDYPFDTMLPGMKFGSDLSTGLNRYLTSQISPDDQSKGNYTFQLDIVGYPELCIRNGESKSFSSGSWNGLRFGGIPRLKQNTIYHYYFVYSKEEIYYTFELLNSSMYSRFVLSANGIMTRYVWSLRNQSWTPYLTLPNDICDSYGKCGPYGKCNIDNSPPCDCLSGTVPKVPEEWNQADWYNGCIRSNPLSCHGDGFKKFTGLKLPDTQKASWLNTSMSLDEYAKFCLKNCSCMAYAALDISKGASGCLMWHDELIDIRVLSDPQQDLYVRMSKKDSDEDEKSKGRSDIPKMQIIVSSSVLFIGMMMILCISLILYRRKKNQKNYRNMRGNPEEHQEEELDLPYFDMATLISATNNFSTNNILGKGGFGAVYKGVLEDGREIAVKRLSEDSRQGLQEFKSEVMHVVKLQHRNLVRLLGCCIQAEERILVYEFMPNKSLDYFIFDRGKILDWPKRFIIIIGIARGLLYLHQDSRHRIVHRDLKAGNVLLDEEINAKISDFGLARTLVGNENEANTATVVGTYGYLSPEYLIDGIFSTKSDVYSFGVLVLEIVTGKRNRGFNNKNHGFNLLGHVWTLFIDGKCLEIVDGSIRDDDASNLCGVIRAIHVGLLCVQRSPEDRPSMSHALMMLSSEWRLPRPKMPGFFTERDPVGDTSSSGNTKVVSINEVTITVSTAIESISITQSLTDDDTMVSAGGTFVVGFCSIPESSKNRYVGIWYSKVPSRTIVWIANRNTPLNDSSGVLKITGNGTLALHSHNHHLAFQLIKIRAAADGSNDDDLKSFIWQSFDYPYNTLLPGMKLYLISPISSDDPSEGSYTHQLNIVGYPQLCTKDGQSMTFNGGSWNGLRFGGIPHKEEIYYTYELVDSAVYSRSVLSADGSMTRYVWSVTNKSWSVYLKLPTDICDDYGKCGAYGICNVANSPVCSCLLNRFEPKDPEEWNQTGWFNGCVRINKLSCQDDGFVKLSGLKLPNTQRASWLNNSVSLEECANLCMKNCSCTAYASLDIRNGGTGCLFWYDELIDIRVLSDPQQDLFVRMSRKDIDEIKKSSHKSKIRKLQIIAAITVISIGILILCLSFMLYRRKKQQINYRNMRDSPERYAHVIQEHQEEELELPLFDMATLIAATNNFSTSNILGKGGFGTVYQGMLNDGREIAVKRLSVNSRQGLQEFKSEVLNVVKLQHRNLVKLLGCCIQEEERMLVYEYMPNKSLDYFIFGLESMQLVWSQRFLIIIGIARGVLYLHQDSRHRIVHRDLKASNILLDDEMNAKISDFGLARSFIGNENEANTTTIVGTYGYVSPEYLIDGIFSTKSDVYSFGVLVLEIVSGKRNRGFSNRNHRFNLLGHVWKLFIEGNCSEIVDPSIRNSSDLSGVIRAIHVGLLCVQQNPEDRPSMLHVLMMLSSECTLLQPKMPGFFTERDLVGDTSSSKSELVSFNEITVSVVHPRKFFSFNFFKTRTY* 1714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1483 1713 ProSiteProfiles Bulb-type lectin domain profile. 935 1080 IPR001480 -
Amo08g1483 1713 ProSiteProfiles Protein kinase domain profile. 1385 1666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1483 1713 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 930 1698 - -
Amo08g1483 1713 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 10 72 - -
Amo08g1483 1713 ProSitePatterns Protein kinases ATP-binding region signature. 1391 1413 IPR017441 GO:0005524
Amo08g1483 1713 SUPERFAMILY alpha-D-mannose-specific plant lectins 970 1086 IPR036426 -
Amo08g1483 1713 Pfam Domain of unknown function (DUF3403) 891 931 IPR021820 GO:0004674
Amo08g1483 1713 Pfam Domain of unknown function (DUF3403) 27 74 IPR021820 GO:0004674
Amo08g1483 1713 Pfam Domain of unknown function (DUF3403) 1657 1700 IPR021820 GO:0004674
Amo08g1483 1713 CDD PAN_AP_plant 1211 1293 - -
Amo08g1483 1713 Pfam Protein tyrosine and serine/threonine kinase 1388 1652 IPR001245 GO:0004672|GO:0006468
Amo08g1483 1713 Pfam Protein tyrosine and serine/threonine kinase 620 884 IPR001245 GO:0004672|GO:0006468
Amo08g1483 1713 SUPERFAMILY Protein kinase-like (PK-like) 1368 1655 IPR011009 -
Amo08g1483 1713 ProSiteProfiles PAN/Apple domain profile. 453 534 IPR003609 -
Amo08g1483 1713 ProSiteProfiles Protein kinase domain profile. 618 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1483 1713 SUPERFAMILY Protein kinase-like (PK-like) 599 889 IPR011009 -
Amo08g1483 1713 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Amo08g1483 1713 Gene3D Phosphorylase Kinase; domain 1 578 693 - -
Amo08g1483 1713 Gene3D Phosphorylase Kinase; domain 1 1346 1460 - -
Amo08g1483 1713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Amo08g1483 1713 Pfam S-locus glycoprotein domain 1112 1192 IPR000858 GO:0048544
Amo08g1483 1713 Pfam S-locus glycoprotein domain 323 431 IPR000858 GO:0048544
Amo08g1483 1713 Gene3D Hepatocyte Growth Factor 1212 1293 - -
Amo08g1483 1713 SMART serkin_6 1385 1660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1483 1713 SMART serkin_6 618 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1483 1713 SMART blect_4 141 265 IPR001480 -
Amo08g1483 1713 SMART blect_4 941 1049 IPR001480 -
Amo08g1483 1713 PANTHER - 122 931 - -
Amo08g1483 1713 ProSiteProfiles Bulb-type lectin domain profile. 135 257 IPR001480 -
Amo08g1483 1713 SMART ntp_6 453 533 IPR003609 -
Amo08g1483 1713 SMART ntp_6 1214 1294 IPR003609 -
Amo08g1483 1713 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 122 931 - -
Amo08g1483 1713 CDD PAN_AP_plant 450 532 - -
Amo08g1483 1713 CDD B_lectin 941 1049 IPR001480 -
Amo08g1483 1713 CDD B_lectin 141 265 IPR001480 -
Amo08g1483 1713 CDD STKc_IRAK 1391 1655 - -
Amo08g1483 1713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1505 1517 IPR008271 GO:0004672|GO:0006468
Amo08g1483 1713 Gene3D Transferase(Phosphotransferase) domain 1 694 895 - -
Amo08g1483 1713 Gene3D Transferase(Phosphotransferase) domain 1 1461 1663 - -
Amo08g1483 1713 Pfam PAN-like domain 1214 1280 IPR003609 -
Amo08g1483 1713 Pfam PAN-like domain 453 519 IPR003609 -
Amo08g1483 1713 PANTHER - 930 1698 - -
Amo08g1483 1713 PANTHER - 10 72 - -
Amo08g1483 1713 ProSiteProfiles PAN/Apple domain profile. 1214 1295 IPR003609 -
Amo08g1483 1713 Pfam D-mannose binding lectin 184 289 IPR001480 -
Amo08g1483 1713 Pfam D-mannose binding lectin 984 1060 IPR001480 -
Amo08g1483 1713 Gene3D - 930 1081 IPR036426 -
Amo08g1483 1713 Gene3D - 130 262 IPR036426 -
Amo08g1483 1713 CDD STKc_IRAK 624 889 - -
Amo08g1483 1713 SUPERFAMILY alpha-D-mannose-specific plant lectins 184 330 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1483 Amo-Chr8 24265650 24277127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1483 606 930 Receptor kinase-like Gene Family AT4G23290 53.709 7.14e-103 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1483 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1483 - - ahf:112769704 1993.01