Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1480 TATAACATTTTTAATACTCAAAATCTTCCATGTATCTTAGCTTCTAGTATTCTAGTTGTTTATGTATTCGTCCCTCATAAAGCTATTGCTATGGAAAGGTTCATCACCTTGCTTCTGTTGTGCTTTTCATTGTTGCACGATACTGCCATTTCCATTACCATAGAAACCATTAGCACTTCACAATCCCTCACTGATGCTGACATCATGCTTTCACCTAGCAGAACCTTTGCATTGGGATTCTTCAGTAGTCCAGAAAATTCCAAAAATCGTTACCTTGGAATATGGTACAATAGAGTATCAACAACCACCGTTGTATGGGTTGCCAATAGAAACAAACCACTCTACCACTCATCCGGAGAGTTGAAGATCGCCAAAGACGGGATTCTAGAGCTTTACAACAGTAGCACCATTGCTTGGTCTTCCAACTCATCAAGATTTTCACAGAAACCCGTTATTGCGGTTCTTTTGGATTCTGGTAACTTCGTTGTGAAGGAAGCAGTCAGAAACAACGACGATTCAACAAGTTTTCTTTGGCAGAGTTTTGATTACCCTGGTGACACTTTGCTACCAGGGATGAAGCTTGGAATCGATTTAACAACCGGCATGAATAGGTACCTAACTTCGTGGACAAGCCGCGATGATCCATCTTCAGGCAACTACACATTTCAGCTTGATATCACTGGGTATCCGCGATTATGTATAAGAAATGGCGAATCCAAGGAGCATTGTGGTGGATCTTGGAATGGTGTTCGGTTTAGTGGAATTCCTCTGCTAAAACAGAATTCCATATTCAACTATTACTTTGTCTCTAACCAAGAAGAGATATATTATACATTTGAGCTTGTTAATAGCTCAGTCTATTCAAGGTTTTCGCTAACCGTGGATGGAATCATGACGCGTTATGTCTGGAATGCTAAGAATCAAAGCTGGAGCATCTATCTAGCAGTACCAAAGGACTTGTGTGATTATTATGGCAAATGCGGCGTGTATGGTAGTTGTAACATAGACAACTCCCCAGTATGTGGATGCTTGAAAGGATTTGAACCTAGGGTCCCAGAAGAATGGAATCAAGCTGATTGGTCTAGTGGCTGCAACAGAAATAATTCGTTAAGCTGTCGCGGAGATGGATTTGCAAAATTTTCTAGTCTCAAGTTACCGGACACAGAGAGGACATCATGGTTAAACAAAACTCTGAGCCTTGTGGAATGTGCTGAAATCTGCATCAGAAACTGCTCTTGCACTGCTTATGCTGCATTAGATATCAGGAAAGAGGCAAGTGGATGTTTACTGTGGTATGGTGACTTAATAGATATTAGAGTACTGAATGATCCACAACAAGATATTTATGTCAGAATGTCAAAGAAAGATCTAGATGAAGATGAAAATTTGAAACACAAATCCGACATCCGAAAGCTGCAGATTATTGTTTCTAGCTCAGTCATATCTGTAGGGATTTTGATCCTCTGTCTATCCTTCACCCTGTATAGATGCAAGAAGTACAAAAAAAACTATAGAAGCATGAGAGGCAAACCAGAAACAGATGCACATGCAATACAAGAGCATCAAAAGGAGGAAGAACTAGATCTACCCTTGTTTGATTTAGCTACAGTTATTTCTGCAACCGATAACTTCTCTATCAATAACATCTTGGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGGAAGATGGAAGAGAAATAGCTGTTAAGAGACTCTCAGAAAATACTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTAATGCATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGATGTTGCATTGAAGCAGATGAAAGGATGTTGGTGTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGATAATGAGAGGAGCATATTATTAGATTGGCCTCAACGCTTTCTTATCATTATTGGCATTGCACGAGGTCTTCTTTATCTCCATCAAGATTCAAGACATAGAATAATTCATAGAGATCTTAAAGCTGGAAATATTTTGTTAGATAATGAAATGAATGCTAAGATTTCTGACTTTGGATTAGCCCGAAGCTTTGCAGGAAATGAAAATGAAGCAAGTACAGTAACTATTGTTGGAACTTATGGATATTTATCACCAGAGTATCTTATTGATGGAATATTCTCAACAAAATCTGATGTCTACAGTTTTGGTGTGCTACTATTAGAGATTGTTAGTGGAAAGAGAAATAGAGGATTCAGCAATAAAAATCATCGCTTTAATCTTTTAGGGCATGTGTGGACATTTTTCATGGAAGGTAACTGCATAGAAATAGTTGACACATCCATTAGAAATGCAGCCAATTTATCGGAAGTCATGAGAGCAATTCATGTGGGCCTCTTATGTGTGCAACAAAGTCCAGAAGACAGGCCGAGCATGTCGTATGTGCTTATGATGCTGAGTAGTGAATGGATATTGCCTCAACCAAAAATGCCTGGCTTCTTTACTGAGAGAGATTTGGTTGGTGGCAGCACCACTTCATCAATTAATGGACTCACAATCACTCAGATGGGAATGAACATGAGCATAATGATGAAAAGCTTCTTCACCTTGCTTCTGTTTGGTTTTTTCTCTGTTCTGAACAATATGGTGGCTTCTACTGCAAGCGATGCTATTGATACCTTGCAATCCATAAGTGATAATAAGGGTGACACCATGGTTTCAGCTGATGAAACCTTTGCACTTGGATTCTTCAGCCCAAGAAATTCCAAGAACCGTTACATTGGGATTTGGTATAACAAAGTCCCAATACAGACAGTTGTATGGGTTGCCAACAAGGATAACCCCCTCACTGACTCCTCAGGGGTCTTGAAGGTCAACGCCACCGGAATTCTCCTCCTTCTCAACGGTAACAAGGAAGTAATATGGTCCTCCAACACAACCGGACCGGCGAAAGATCCGGTTGCAAAGCTTTTGAGTTCTGGAAATCTTGTGCTGCAAGAAAGAAGCAACAACAGAGCGGACGGCTTTTTATGGCAGAGTTTCGACTATCCATCCGACACGCTTCTGCCTGGACAGAAGTTTGGAGTGAATCTAGTCACAGGACTGAACCGATACTTGACATCGTGGAAGAATTCGGATGACCCTTCTCGCGGTAACTATACTTATGGACTGGATATCCATGGGTACCCGCAGTTATTTATAAGGGAAGGTAGTGCCAAAAGATTTCGTTTCGGATCATGGAATGGTGTTCAGGTTAGCGGGGTAGCTCAGTTGACAGAGAATCCAATATTCATTTATGAATTTAGTTATAATGAGGAAGAAGCATATTTTATATATGAGCTAATCAATAGTTCAGTTCTTCATAGGCTTCGATTGTCACCAGATGGATTTAGCCACCGTACTACTTGGAGCTATGAAAAAATGGAATGGATCACTTTTTTCCACATACCAGCGGATTCCTGTGATTACTATGCAAAATGTGGTGGTTATGCTAGCTGTAATGTAAACAAATCTCCTATATGTAATTGCTTGGATAAATTTGTGCAAAATGGAACAAAATGTGTAAGGAAAACTTCACTGAACTGCCATGAAGACGGGTTCTTGAAGTATTCGGGGCTAAAATTACCGGACACAGATAAATCATGGTTTGATAGAACCATTAGCCTTGAAGAGTGCAGGGTTTTGTGCTTGAAGAACTGCTCATGTACAGCTTATGCACCTTTAGATATCAGCAGCGGTGCAAGGGGGTGTTTACTTTGGTTTGATGATTTGATGGATATGAAAGAGTTGAATTCATCTCTTCAAGATGTTTACATAAGGATGGCAAAGACAGAATTAGGAAGTTTAGAAGTGCAGAAATCAAACAAATCCAACACTAGGAGGAAGCAAGAGGCTATCATCATAAGCTCCTCTTTGTTGTCTTTTGGGGGTATTTTAGAAGATGGAAGAGAAATAGCTGTCAAAAGACGTTCACAGAATTCAACCCAAGGACTCAAAGAATTCAAAAATGAAGTTAAGCATGTTTCCAAACTTCAGCACAGGAATTTAGTGAAGCTACTAGGGTGCTGTATTCAAGCAACAGAGAGGCTTCTGATTTATGAATTTATGCCCAATAAGAGCTTGGACTTCTTCATATTTGATGAACAGAAGGCTATGTTACTAGGTTGGCCGACGCGTTTGCATATAATCAATGGGATTGCTCGAGGTCTTCTTTACCTTCGTCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAAGCCGCCAATGTATTGTTAGACGCAGAAATGAACCCAAAAGTATCGGACTTTGGATTGGCTAGAAGCTTCGGAGGAAATGAAGTTGAAGCAAGCACACAAAATGTGGTTGGAACCTATGGATATCTATCACCAGAGTATGTAATCGATGGAGTGTACTCGACAAAATCCGATGTATTTAGCTTTGGTGTGTTGGTATTGGAAATCGTAAGTGGGAAGAGAAACCGAGGCTTCAATCATCAAGATCACCACTTTAACCTTCTTGGTCATGCATGGAGATTGTTTACAGAAGGCAAAGGCTATGAAATAGTTTGTAATGCAATAAGAGACACATCGAATTTATCTTCGGTTCTAAGATTGATCCATATAGGACTACTATGTGTGCAGCAGAATCCAGATGACAGACCAAGCATGTCAAGTGTGGTTTTAATGCTGAGTAGTGAAATTGCATTACCTCAACCTAAAATGCCTGGATTCTTTACAGAGAGAGAGATGGGAGGTGATGTTTCTTCATCAAGTAGTTATAAAGCAGTCTCAAATAATGATTATACAGTTAGTTTATTGGAAGCTCGATAG 4821 0.3972 YNIFNTQNLPCILASSILVVYVFVPHKAIAMERFITLLLLCFSLLHDTAISITIETISTSQSLTDADIMLSPSRTFALGFFSSPENSKNRYLGIWYNRVSTTTVVWVANRNKPLYHSSGELKIAKDGILELYNSSTIAWSSNSSRFSQKPVIAVLLDSGNFVVKEAVRNNDDSTSFLWQSFDYPGDTLLPGMKLGIDLTTGMNRYLTSWTSRDDPSSGNYTFQLDITGYPRLCIRNGESKEHCGGSWNGVRFSGIPLLKQNSIFNYYFVSNQEEIYYTFELVNSSVYSRFSLTVDGIMTRYVWNAKNQSWSIYLAVPKDLCDYYGKCGVYGSCNIDNSPVCGCLKGFEPRVPEEWNQADWSSGCNRNNSLSCRGDGFAKFSSLKLPDTERTSWLNKTLSLVECAEICIRNCSCTAYAALDIRKEASGCLLWYGDLIDIRVLNDPQQDIYVRMSKKDLDEDENLKHKSDIRKLQIIVSSSVISVGILILCLSFTLYRCKKYKKNYRSMRGKPETDAHAIQEHQKEEELDLPLFDLATVISATDNFSINNILGKGGFGTVYQGMLEDGREIAVKRLSENTRQGLQEFKSEVMHVVKLQHRNLVKLLGCCIEADERMLVYEFMPNKSLDYFIFDNERSILLDWPQRFLIIIGIARGLLYLHQDSRHRIIHRDLKAGNILLDNEMNAKISDFGLARSFAGNENEASTVTIVGTYGYLSPEYLIDGIFSTKSDVYSFGVLLLEIVSGKRNRGFSNKNHRFNLLGHVWTFFMEGNCIEIVDTSIRNAANLSEVMRAIHVGLLCVQQSPEDRPSMSYVLMMLSSEWILPQPKMPGFFTERDLVGGSTTSSINGLTITQMGMNMSIMMKSFFTLLLFGFFSVLNNMVASTASDAIDTLQSISDNKGDTMVSADETFALGFFSPRNSKNRYIGIWYNKVPIQTVVWVANKDNPLTDSSGVLKVNATGILLLLNGNKEVIWSSNTTGPAKDPVAKLLSSGNLVLQERSNNRADGFLWQSFDYPSDTLLPGQKFGVNLVTGLNRYLTSWKNSDDPSRGNYTYGLDIHGYPQLFIREGSAKRFRFGSWNGVQVSGVAQLTENPIFIYEFSYNEEEAYFIYELINSSVLHRLRLSPDGFSHRTTWSYEKMEWITFFHIPADSCDYYAKCGGYASCNVNKSPICNCLDKFVQNGTKCVRKTSLNCHEDGFLKYSGLKLPDTDKSWFDRTISLEECRVLCLKNCSCTAYAPLDISSGARGCLLWFDDLMDMKELNSSLQDVYIRMAKTELGSLEVQKSNKSNTRRKQEAIIISSSLLSFGGILEDGREIAVKRRSQNSTQGLKEFKNEVKHVSKLQHRNLVKLLGCCIQATERLLIYEFMPNKSLDFFIFDEQKAMLLGWPTRLHIINGIARGLLYLRQDSRHRIVHRDLKAANVLLDAEMNPKVSDFGLARSFGGNEVEASTQNVVGTYGYLSPEYVIDGVYSTKSDVFSFGVLVLEIVSGKRNRGFNHQDHHFNLLGHAWRLFTEGKGYEIVCNAIRDTSNLSSVLRLIHIGLLCVQQNPDDRPSMSSVVLMLSSEIALPQPKMPGFFTEREMGGDVSSSSSYKAVSNNDYTVSLLEAR* 1607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1480 1606 Gene3D Phosphorylase Kinase; domain 1 505 619 - -
Amo08g1480 1606 ProSiteProfiles Protein kinase domain profile. 1269 1566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1480 1606 Gene3D - 879 1010 IPR036426 -
Amo08g1480 1606 Gene3D - 50 181 IPR036426 -
Amo08g1480 1606 ProSiteProfiles Protein kinase domain profile. 544 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1480 1606 SMART blect_4 60 184 IPR001480 -
Amo08g1480 1606 SMART blect_4 892 1013 IPR001480 -
Amo08g1480 1606 ProSitePatterns Protein kinases ATP-binding region signature. 550 572 IPR017441 GO:0005524
Amo08g1480 1606 Gene3D Hepatocyte Growth Factor 370 452 - -
Amo08g1480 1606 Gene3D Hepatocyte Growth Factor 1186 1269 - -
Amo08g1480 1606 CDD B_lectin 55 184 IPR001480 -
Amo08g1480 1606 SUPERFAMILY alpha-D-mannose-specific plant lectins 935 1044 IPR036426 -
Amo08g1480 1606 CDD B_lectin 898 1013 IPR001480 -
Amo08g1480 1606 CDD PAN_AP_plant 370 451 - -
Amo08g1480 1606 CDD STKc_IRAK 550 815 - -
Amo08g1480 1606 ProSiteProfiles Bulb-type lectin domain profile. 886 1007 IPR001480 -
Amo08g1480 1606 SUPERFAMILY Protein kinase-like (PK-like) 528 815 IPR011009 -
Amo08g1480 1606 Pfam PAN-like domain 1191 1256 IPR003609 -
Amo08g1480 1606 Pfam PAN-like domain 372 438 IPR003609 -
Amo08g1480 1606 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 873 1278 - -
Amo08g1480 1606 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 1304 1604 - -
Amo08g1480 1606 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 42 845 - -
Amo08g1480 1606 Gene3D Transferase(Phosphotransferase) domain 1 1365 1567 - -
Amo08g1480 1606 Gene3D Transferase(Phosphotransferase) domain 1 620 820 - -
Amo08g1480 1606 Pfam S-locus glycoprotein domain 245 350 IPR000858 GO:0048544
Amo08g1480 1606 Pfam S-locus glycoprotein domain 1071 1178 IPR000858 GO:0048544
Amo08g1480 1606 SMART ntp_6 1191 1270 IPR003609 -
Amo08g1480 1606 SMART ntp_6 372 452 IPR003609 -
Amo08g1480 1606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1410 1422 IPR008271 GO:0004672|GO:0006468
Amo08g1480 1606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
Amo08g1480 1606 Gene3D Phosphorylase Kinase; domain 1 1273 1364 - -
Amo08g1480 1606 ProSiteProfiles Bulb-type lectin domain profile. 54 176 IPR001480 -
Amo08g1480 1606 SUPERFAMILY Protein kinase-like (PK-like) 1306 1560 IPR011009 -
Amo08g1480 1606 Pfam Domain of unknown function (DUF3403) 1561 1606 IPR021820 GO:0004674
Amo08g1480 1606 Pfam Protein tyrosine and serine/threonine kinase 546 813 IPR001245 GO:0004672|GO:0006468
Amo08g1480 1606 Pfam Protein tyrosine and serine/threonine kinase 1311 1558 IPR001245 GO:0004672|GO:0006468
Amo08g1480 1606 Pfam D-mannose binding lectin 934 1039 IPR001480 -
Amo08g1480 1606 Pfam D-mannose binding lectin 103 209 IPR001480 -
Amo08g1480 1606 CDD PAN_AP_plant 1187 1271 - -
Amo08g1480 1606 SUPERFAMILY alpha-D-mannose-specific plant lectins 104 215 IPR036426 -
Amo08g1480 1606 SMART serkin_6 544 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1480 1606 SMART serkin_6 1302 1565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1480 1606 PANTHER - 873 1278 - -
Amo08g1480 1606 PANTHER - 1304 1604 - -
Amo08g1480 1606 PANTHER - 42 845 - -
Amo08g1480 1606 ProSiteProfiles PAN/Apple domain profile. 372 453 IPR003609 -
Amo08g1480 1606 ProSiteProfiles PAN/Apple domain profile. 1191 1271 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1480 Amo-Chr8 24180588 24191886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1480 498 830 Receptor kinase-like Gene Family AT4G11480 53.433 1.03e-109 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1480 PK_Tyr_Ser-Thr 4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1480 - - ahf:112769704 2529.98