Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1479 ATGGAGATGGCTTATGCAGCTTTAGATATAAGTAAAGGGGAGAATGGGTGTTTGCTATGGTTTGGAAATCTTAATGATATGGAAGAGTTGACTCCGTCTCTCCAAAATATCTATATAAGAATGGCTGCTACGGAATTAGGTACAGTAAGTGGTCACCATAACGAAGAAATAGAATTACCGTTGTTTGATATGTCCACAATTATTTCTGCAACCAATAATTTTTCTGCTGACAACATACTTGGAAAAGGTGGTTCTGGATCAGTTTATAAGGGTATTTTAAAAGATGGACAAGAAATAGCTGTCAAGAAGCTTTCACGAAATTCAAGTCGAAGACTCCAAGAGTTTAAAAATGAAGCTATGCACATTGCCAAACTTCAGCATAGAAATTTAGTGAAGCTATTAGGATTCTGTATTCAAGAAGAAGAAAGATTGTTGGTTTATGAATTTATGCGCAACAAAAGCTTGGACTTCTTCATATTCGATTGCGAAAGAGGAAAACTATTAGACTGGCGTAAGCGTTTTTTTATAATAAATGGAATTGTCAAAGGTCTTCTCTATCTTCATCATGATTCAAGGCATAGAATTATTCACAGAGATCTTAAGGCTGGAAATATTCTGTTAGATGACGAATTGAATCCCAAAATCTCAGACTTTGGACTAGCAAGAAGTTTCGTAGGAAATGAAAATGAAGATAACACAAGCCATATCGCTGGAACTTATGGCTATTTGTCACCTGAATACATTATTGACGGACTGTACTCAACGAAATCCGATGTCTATAGTTTTGGTGTACTGGCATGGACACTTTTCGCTGAAGGCAAGTGCTTAGAAATGGTGGATGTAATGATTAAAGACTCGATTGATTCACGAGAAGAAGTGATAAGATTAATTCATGTAGGTTTATTATGTGTTCAACGAAGACCAGAAGACCGGCCAAGCATGTCCGATGTGCTTATGATGCTAAGTAGTGAAGGGCCATTGCCTCAACCAAAGAAGCCAGGGTTCTTTATTGAGAGAGATGTGGATTTTGGTGATTCTTCTTCCTCAAGGAATGATAAACTACTATCATCAGTTAATCATCTTACAGTTAGCGATGTCAATCCGCGGTAG 1110 0.3721 MEMAYAALDISKGENGCLLWFGNLNDMEELTPSLQNIYIRMAATELGTVSGHHNEEIELPLFDMSTIISATNNFSADNILGKGGSGSVYKGILKDGQEIAVKKLSRNSSRRLQEFKNEAMHIAKLQHRNLVKLLGFCIQEEERLLVYEFMRNKSLDFFIFDCERGKLLDWRKRFFIINGIVKGLLYLHHDSRHRIIHRDLKAGNILLDDELNPKISDFGLARSFVGNENEDNTSHIAGTYGYLSPEYIIDGLYSTKSDVYSFGVLAWTLFAEGKCLEMVDVMIKDSIDSREEVIRLIHVGLLCVQRRPEDRPSMSDVLMMLSSEGPLPQPKKPGFFIERDVDFGDSSSSRNDKLLSSVNHLTVSDVNPR* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1479 369 ProSiteProfiles Protein kinase domain profile. 74 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1479 369 Gene3D Transferase(Phosphotransferase) domain 1 150 326 - -
Amo08g1479 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 57 265 - -
Amo08g1479 369 Pfam Domain of unknown function (DUF3403) 322 369 IPR021820 GO:0004674
Amo08g1479 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Amo08g1479 369 SUPERFAMILY Protein kinase-like (PK-like) 59 332 IPR011009 -
Amo08g1479 369 SMART serkin_6 74 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1479 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 266 347 - -
Amo08g1479 369 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 47 - -
Amo08g1479 369 Gene3D Phosphorylase Kinase; domain 1 49 149 - -
Amo08g1479 369 Pfam Protein kinase domain 76 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1479 369 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-1 57 265 - -
Amo08g1479 369 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-1 266 347 - -
Amo08g1479 369 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-1 3 47 - -
Amo08g1479 369 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1479 Amo-Chr8 24150390 24156267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1479 62 369 Receptor kinase-like Gene Family AT4G11480 47.384 8.62e-104 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1479 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1479 - - adu:107462371 707.597