Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1478 ATGGAAGGCTTTACAATAATGATTCTGTTCTTTCTGATGAACTATATGGTGGTGGCTTCAACTGCAAGGGACACTATAGATTCACTGCAATCTATCAGTGATGGTGAGATAATAGTTTCTTCTGATGAAATCTTTGCATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTACGTCGGAATCTGGTTTAACAAAGATCCATCCAAGACAGTAGTTTGGGTTGCAAACAGAGAAAAACCCCTCACTGACTCGTCAGGAATTCTGAAGCTCAACAACACTGGAACTCTAGTCCTTCTTGATCGTAACAATAGTGTTATTTGGTCCTCCAACGCAACAAGATCCGTCATGAATCCAATTGGAAAGCTTTTGAATTCAGGAAATCTTGTTGTGCAAGAAAGAAGTAATAATGGTGCTAGCAAAGAAGATTTTGTATGGCAAAGTTTTGATTATCCATCCGACACGCTCTTGCCTGGACAGAAGTTAGGAACAAATCTAAAAACAGGACAGAATTGGTATCTAACGTCTTGGAACAGCTCGGACGATCCATTTCCAGGTAGATATACTTTAGAATTCGATATCAACGGATATCCTCAATTAGTCCTTAAAGATGGAGGATCTAAAAGATGGCGTGCCGGATCATGGAATGGAGTTCAATTCAGTGGAACGCCACAAGTGAAAGAAAACTCAGGCTTTAGATATAAATATGTTTCTAACGAGGAAGAGATATATTTTATGTATGAACTTATCAACAATTCAAACCCTCATAAGGTGGTTCTAACGCCGGAGGGAATCAACCAGAGAAGCCAGTGGAATCCGGACACATCGAGTTGGACCGACTTGGCAAGGCTACCCGCTGATGATTGTGACTACTATGAAACATGTGGAGCTTATTCTAGTTGTAATGTTAACAACTATCCAATGTGTAGTTGTTTGGATGGATTTGTGCAAGATAATAATAAGAAGGAGCAAGGTTTATCAGATGGTTGTGTAAGAAGAACATCATTGGATTGTTATGGAGATGGGTTTCTGAAGTATTCAGGGCTGAAATTGCCAGATACAGAAAGATCATGGTATAGTAGAAATATCAGCATTGAATATTGTAAGATGATGTGCTTGAAGAATTGTTCATGTGTGGCTTATGCAGCTCTGGATATAAGTGAAGGCGCAAGTGGTTGTTTGATGTGGTTTGGTAATTTAAATGATATTAAAGCTCTGACTCCATATTCTCTTGAAGATATTTACATAAGGATGGCTGCTACAGAACTAGAAGCTATGCAGGAAAATGAATCACACAAATCAAACATCCGAAAGAAAAAGACTATCATCATAGTTTGTGCCTTATCTTTTAGTGTTTTAATCATATGCTTGGCCTTCATCGTCTTTAGATGGAAGATACGAAGAAAAGGTGTAATGAATGACTATGAGGAAGATCTGCAATTGTCTTTGTTTGATATGTCCACAATTTCTTCTGCAACAAATAATTTTTCAGCTGATAATATTTTGGGAAAAGGTGGCTTTGGTTCGGTATATAAGAATCATAATCTTTTGCCTATGTGTTTTTATAACTTTCAGGGTGTATTAAAGGATGGGAAAGAAATAGCAGTTAAGAGACTCTTACAAAATTCAAGTCAAGGAATCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCATAGGAATTTAGTGAAGCTCCTAGGATGTTGCATTTATGCAGAAGAAAGATTGCTAGTCTATGAATTTATGCCCAACAAAAGCTTGGACTACTTCATATTTGATGAAAAGAAGAGTATGTTACTAGATTGGACAAGGCGCTTTGACATTATCAATGGAATTGCTCGAGTTCATAGAGATCTCAAAGCTGCCAATGTTTTGTTAGACGGTGAAATGAATCCAAAAATTTCAGACTTTGGACTAGCTAGAAGTTTTGGAGGGAACGAAACAAAAGCAAACACTCGGCATGTTGTTGGAACTTATGGATATTTATCACCGGAATACATAATTGATGGAGTTTACTCAATAAAATCTGATGTATTCAGTTTTGGTGTATTGGTGTTAGAAATAGTGAGTGGAAGTAGAAATAGAGGATTCATTCATCAAGATCATCACTTTAATCTTCTAGGACATGCATGGAAACTATTTATGGAAGACAAAGGGTACGAAATAATTTATGCTCCAATAAGAGATGCATCTAATTTATCTTCAATGCTAAGATCAATTCATGTGGGACTACTTTGTGTGCAAAAAAGTCCAGATGAAAGGCCAAACATGTCATACGTTGTTCAAATGTTGAGTAGTGAATCCACACTACCTCCACCTAAAATGCCTGGATTCTTCACAGAAAGAGAAATGGCTGATGAAGGTTCTTCTCCAAAGACACTCAGATTCACACTGCAAATGGAAGACTTCACAATAATGATTCTCTTATGCTTATTTTGGATGAACTATATGGTGGCCTCCACTGCAAGGGACACTATTGATTCAGTGCAATCTATCAGTGATGGTGAGAAAATAGTTTCAGCTGATGAAATCTTTGTATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTATGTTGGAATCTGGTATAACAAAGATCCAACAAAGGCAATAGTGTGGGTTGCAAACAGAGAAAAACCCCTCGCTGATTCCTCAGGTGTTCTGAAGCTCAACAACACCGGAATTTTAGTCCTTCTTGATCATAACAGCAGTCTTATTTGGTCCTCCAACGCAACAAGATCCGTCCTGAATCCGGTCGCAAAGCTTTTGAATTCAGGAAATCTTGTTGTGCAAGAAACAAACAGCAATGGTGCTAACGAAGAAGATTTCGTATGGCAAAGTTTTGATTATCCAGGCGACACGGTCTTGCCTGAACAGAAGTTAGGAATAAATCTGAAAACAGGACAGAATCGATATCTAACCTCATGGAGCAGCTCGGATGATCCGTTTCCAGGTAGATATACTTTACAAATCGATATCAAGGGATATCCTCAAGTATTCATTAAAGAAGGTGCAAAGAAAAGATTTCGTGCTGGATCATGGAATGGAGTTCAATTCAGTGGAACGCCACAAGTGAAAGGAAACCCAATCTTTAGATATAAATATGTTTCTAACGAGGAAGAGATATATTTTATGTATGAACTTATCAATAATTCAAACCCTCATAAAGTGGTTCTAACGCCGGAGGGAATCAACCAGAGAAGCCAGTGGAGTACGGACACATCGAGTTGGACCAACTTGGCAAGGTTACCGGCTGATGATTGTGACTACTATGAAACATGTGGAGCTTATTCTAGTTGTAATGTTAACAACTATCCAAGGTGTAGTTGTTTGGATGGATTTGTGCAAGATAATAATAAGAAGGAGCAAGGTTTATCAGATGGTTGTGTAAGAAGAACATCATTAGATTGTAATGGAGATGGGTTTTTGAAGTATTCAGGGCTGAAATTGCCAGATACAGAAAGATCATGGTATAGTAGAAATATCAGCATTGAAGATTGTAAGATGGTGTGCTTGAAGAATTGTTCATGTATGGCTTATGCAGCTTTGGATATAAGTGAAGGCGCTAGTGGTTGTTTGATGTGGTTTGGTAATTTAAATGATATTAAAGCCCTGAATCCAAATTCTCTTCAAGATATTTACTTAAGAATGGCTGCTACAGAACTAGAGGAAAATAAATCACACAAATCAAATGTCCGAAAGAAAAAGACTATCATCATAATTTGTGCGTTATCTTCTAGTGTTCTAATCATATGCTTGGCCTTCATCGTCCTTAGATGGAAGATACGAAGGAAAGGTGTAACAAGTGACCAACAAGAGGAAGATCCACAATTGCCTTTGTTTGATATGTCCACAATTTCTTCTGCAACAAATAATTTTTCAACCGATAGCATTTTGGGAAAAGGTGGCTTTGGTTCGGGTGTATTAAAGGATGGAAAAGAAATAGCGGTTAAGAGACTCTTACAGAATTCAAGTCAAGGAATACAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCACAGAAATTTAGTGAAACTCCTAGGATGTTGCGTTTATGCAGAAGAAAGATTGCTAGTCTATGAATTTATGCCCAACAAAAGCTTGGACTACTTCATATTTGATGAAAAGAAGAGCATGTTACTAGATTGGACTAGGCGCTTTGACATTATCAATGGAATTGCTCGAGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTTAAAGCCGCCAATATTTTATTAGACGGTGAAATGAATCCAAAAATTTCAGACTTTGGACTGGCTAGAAGTTTTGGAGGGAACGAAACAAAAGCAAACACAAGACATGTTGTTGGAACTTACGGATATTTATCACCAGAGTACATAATTGATGGAGTTTACTCAACAAAATCCGATGCATGGAAACTATTTATGGAAGACAAAGGGTACGAAATAATTCATGCTCCAATAAGAGATACATCAAATTTATCTTCAATGCTAAGATCAATTCACGTGGGACTACTTTGTGTGCAAAAAAGTCCAGATGAGAGGCCAAACATGTCATATGTTGTTCAAATGTTGAGTAGTGAATCCACATTGCCTCTACCTAAAATGCCTGGATTCTTCTTAGAAAGAGAAATGGTTGATGAAGTCTCTATTGCAAGAGACACAATTGATAGAGTACAATTTCTGCGCGATAATGGTGAGACCATAGTTTCAGCTGATGAAACCTTTGCACTAGGGTTTTTTAGCCCTGGAACTTCTAAGAATAGGTATGTCGGAATTTGGTATAACAAAGTTCCAAAACAGAGTATCGTATGGGTTGCCAACAGAAACAAGCCCTTAACAAACTTATCGGGGGTCCTGAAGGTCATCGACAACGGAATCTTAGTTCTTCTTGATCGTAACAACAATAATGTCACCATCTGGTCCTCTAATACAACTTCATCAGCAACACAGGATCCAATTGCAAAGCTTCTGAATTCAGGAAATCTTGTAGTGCGTGAGAGAAGCAAAGGTGATGATGACAACAAAAATTTTTTGTGGCAGAGTTTTGACTATCCATCCGATACAATGCTACCTGGACAAAAGCTAGGGAGAAATTTGGTTACAGGTCTAAACCGGTACCTAAGATCATGGAACAACTCTAATGATCCATCTTACGGTAGATATAGTTTACAACTTGATATAGATGGATGTCCACAGCTTATGATCCGAGACGGCGCAACCAAAAGCGTTCGCATCGGATCATGGAACGGCGTTCAATTTAGCGGACAAGCAGCGGTGGCTAAAAAAACCTCCATAGTTAAATATAACTATGTTTCCAACGAGGAAGAAGAATATGCTACTTATGAGCTTATCAACAGTGTAGCTCCTCATAAATTGGTGAATCATCTTGGATCACCATTTCAAAAAAGCCTGGAGATTCTTGCGACTACCACGCAACGTGTGGGTCTTATTCTCGTTGTAATAGCAATAGTAACCCTATGTGCGATTGCTTGGATGGATTTATACCAAGTAACGAGCAAGATTCGTATAGCGATTGTGTTAGGAGAACTTCGTTGA 5583 0.381 MEGFTIMILFFLMNYMVVASTARDTIDSLQSISDGEIIVSSDEIFALGFFSPGTSKNRYVGIWFNKDPSKTVVWVANREKPLTDSSGILKLNNTGTLVLLDRNNSVIWSSNATRSVMNPIGKLLNSGNLVVQERSNNGASKEDFVWQSFDYPSDTLLPGQKLGTNLKTGQNWYLTSWNSSDDPFPGRYTLEFDINGYPQLVLKDGGSKRWRAGSWNGVQFSGTPQVKENSGFRYKYVSNEEEIYFMYELINNSNPHKVVLTPEGINQRSQWNPDTSSWTDLARLPADDCDYYETCGAYSSCNVNNYPMCSCLDGFVQDNNKKEQGLSDGCVRRTSLDCYGDGFLKYSGLKLPDTERSWYSRNISIEYCKMMCLKNCSCVAYAALDISEGASGCLMWFGNLNDIKALTPYSLEDIYIRMAATELEAMQENESHKSNIRKKKTIIIVCALSFSVLIICLAFIVFRWKIRRKGVMNDYEEDLQLSLFDMSTISSATNNFSADNILGKGGFGSVYKNHNLLPMCFYNFQGVLKDGKEIAVKRLLQNSSQGIQEFKNEVMHIAKLQHRNLVKLLGCCIYAEERLLVYEFMPNKSLDYFIFDEKKSMLLDWTRRFDIINGIARVHRDLKAANVLLDGEMNPKISDFGLARSFGGNETKANTRHVVGTYGYLSPEYIIDGVYSIKSDVFSFGVLVLEIVSGSRNRGFIHQDHHFNLLGHAWKLFMEDKGYEIIYAPIRDASNLSSMLRSIHVGLLCVQKSPDERPNMSYVVQMLSSESTLPPPKMPGFFTEREMADEGSSPKTLRFTLQMEDFTIMILLCLFWMNYMVASTARDTIDSVQSISDGEKIVSADEIFVLGFFSPGTSKNRYVGIWYNKDPTKAIVWVANREKPLADSSGVLKLNNTGILVLLDHNSSLIWSSNATRSVLNPVAKLLNSGNLVVQETNSNGANEEDFVWQSFDYPGDTVLPEQKLGINLKTGQNRYLTSWSSSDDPFPGRYTLQIDIKGYPQVFIKEGAKKRFRAGSWNGVQFSGTPQVKGNPIFRYKYVSNEEEIYFMYELINNSNPHKVVLTPEGINQRSQWSTDTSSWTNLARLPADDCDYYETCGAYSSCNVNNYPRCSCLDGFVQDNNKKEQGLSDGCVRRTSLDCNGDGFLKYSGLKLPDTERSWYSRNISIEDCKMVCLKNCSCMAYAALDISEGASGCLMWFGNLNDIKALNPNSLQDIYLRMAATELEENKSHKSNVRKKKTIIIICALSSSVLIICLAFIVLRWKIRRKGVTSDQQEEDPQLPLFDMSTISSATNNFSTDSILGKGGFGSGVLKDGKEIAVKRLLQNSSQGIQEFKNEVMHIAKLQHRNLVKLLGCCVYAEERLLVYEFMPNKSLDYFIFDEKKSMLLDWTRRFDIINGIARGLLYLHQDSRHRIVHRDLKAANILLDGEMNPKISDFGLARSFGGNETKANTRHVVGTYGYLSPEYIIDGVYSTKSDAWKLFMEDKGYEIIHAPIRDTSNLSSMLRSIHVGLLCVQKSPDERPNMSYVVQMLSSESTLPLPKMPGFFLEREMVDEVSIARDTIDRVQFLRDNGETIVSADETFALGFFSPGTSKNRYVGIWYNKVPKQSIVWVANRNKPLTNLSGVLKVIDNGILVLLDRNNNNVTIWSSNTTSSATQDPIAKLLNSGNLVVRERSKGDDDNKNFLWQSFDYPSDTMLPGQKLGRNLVTGLNRYLRSWNNSNDPSYGRYSLQLDIDGCPQLMIRDGATKSVRIGSWNGVQFSGQAAVAKKTSIVKYNYVSNEEEEYATYELINSVAPHKLVNHLGSPFQKSLEILATTTQRVGLILVVIAIVTLCAIAWMDLYQVTSKIRIAIVLGELR* 1861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1478 1860 SUPERFAMILY Protein kinase-like (PK-like) 480 783 IPR011009 -
Amo08g1478 1860 ProSiteProfiles Bulb-type lectin domain profile. 1561 1686 IPR001480 -
Amo08g1478 1860 SUPERFAMILY Protein kinase-like (PK-like) 1275 1533 IPR011009 -
Amo08g1478 1860 ProSiteProfiles PAN/Apple domain profile. 338 419 IPR003609 -
Amo08g1478 1860 CDD B_lectin 30 152 IPR001480 -
Amo08g1478 1860 Gene3D Transferase(Phosphotransferase) domain 1 1370 1539 - -
Amo08g1478 1860 Gene3D Transferase(Phosphotransferase) domain 1 585 773 - -
Amo08g1478 1860 Pfam PAN-like domain 1141 1206 IPR003609 -
Amo08g1478 1860 Pfam PAN-like domain 339 403 IPR003609 -
Amo08g1478 1860 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 183 IPR036426 -
Amo08g1478 1860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1415 1427 IPR008271 GO:0004672|GO:0006468
Amo08g1478 1860 Pfam D-mannose binding lectin 71 177 IPR001480 -
Amo08g1478 1860 Pfam D-mannose binding lectin 1611 1719 IPR001480 -
Amo08g1478 1860 Pfam D-mannose binding lectin 875 980 IPR001480 -
Amo08g1478 1860 CDD PAN_AP_plant 1137 1222 - -
Amo08g1478 1860 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 1479 1556 - -
Amo08g1478 1860 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 1556 1806 - -
Amo08g1478 1860 Pfam Protein tyrosine and serine/threonine kinase 499 767 IPR001245 GO:0004672|GO:0006468
Amo08g1478 1860 ProSiteProfiles PAN/Apple domain profile. 1141 1222 IPR003609 -
Amo08g1478 1860 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1478 1860 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Amo08g1478 1860 CDD PAN_AP_plant 334 419 - -
Amo08g1478 1860 SUPERFAMILY alpha-D-mannose-specific plant lectins 875 986 IPR036426 -
Amo08g1478 1860 SMART serkin_6 496 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1478 1860 SMART serkin_6 1297 1533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1478 1860 CDD B_lectin 832 955 IPR001480 -
Amo08g1478 1860 ProSiteProfiles Protein kinase domain profile. 1297 1584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1478 1860 SUPERFAMILY alpha-D-mannose-specific plant lectins 1611 1725 IPR036426 -
Amo08g1478 1860 CDD B_lectin 1573 1694 IPR001480 -
Amo08g1478 1860 Gene3D - 820 952 IPR036426 -
Amo08g1478 1860 Gene3D - 1555 1691 IPR036426 -
Amo08g1478 1860 Gene3D - 16 149 IPR036426 -
Amo08g1478 1860 SMART ntp_6 338 418 IPR003609 -
Amo08g1478 1860 SMART ntp_6 1141 1221 IPR003609 -
Amo08g1478 1860 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Amo08g1478 1860 Pfam S-locus glycoprotein domain 1013 1120 IPR000858 GO:0048544
Amo08g1478 1860 Gene3D Phosphorylase Kinase; domain 1 462 584 - -
Amo08g1478 1860 Gene3D Phosphorylase Kinase; domain 1 1271 1369 - -
Amo08g1478 1860 SMART blect_4 832 955 IPR001480 -
Amo08g1478 1860 SMART blect_4 1568 1694 IPR001480 -
Amo08g1478 1860 SMART blect_4 29 152 IPR001480 -
Amo08g1478 1860 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 15 809 - -
Amo08g1478 1860 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 814 1478 - -
Amo08g1478 1860 Pfam Protein kinase domain 1298 1481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1478 1860 PANTHER - 15 809 - -
Amo08g1478 1860 PANTHER - 1479 1556 - -
Amo08g1478 1860 PANTHER - 1556 1806 - -
Amo08g1478 1860 PANTHER - 814 1478 - -
Amo08g1478 1860 Gene3D Hepatocyte Growth Factor 337 413 - -
Amo08g1478 1860 Gene3D Hepatocyte Growth Factor 1139 1223 - -
Amo08g1478 1860 ProSiteProfiles Bulb-type lectin domain profile. 826 947 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1478 Amo-Chr8 24120987 24150383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1478 431 789 Receptor kinase-like Gene Family AT4G05200 46.194 1.05e-98 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1478 PK_Tyr_Ser-Thr 2.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1478 - - ahf:112769704 1847.02