Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1468 ATGAAGGTTGGGAAGGATTTAAGAACTGGTTTCGATTGGCGCGTAACGGCGTGGAAGAATGAGAATGATCCTTCACCAGGAACCTTGAATTGGGTTATGGATGTTACCATGTGGCCTGAACCGATGCAGAGGATTGGAACAGTGAAGCAGTACAATAGTGGTCCTTGGAATGGAGTTCAATACAGTGCCAAACCAACAAACAAGCCTAGCCCGGCTTTCGAGTTCATCTACTTTGCTGATGAAAACCAAGTTTACTACATGTTCAAACTTGTTAACAACTCTGTCAAAGCTAGAATGATGTTGAACCAAACCACAAACAAGATTATGCAGCTTGTGTGGACACAAGGTGTTTGGAAGATGTATGGTTCGATGCCAAGGGATTTTTGTGATGAGTATGGTGCTTGTGGTCCTAATGGGAAATGTGACATGGCTGAGTCTCCAAATGATTGTGAATGTTTGAGAGGGTATAGGCCTAAGTCGCCAAAAGAATGGATCGGATTGAATTATGAAGGAGGTTGCTTGCGCGACAAGCCACTGAATTGCGAAAGCGATGGGTTTATCAAGTATGTTAAGATGAAGGTGCCTGATACTGAGAATTGTTGGTACTTAAATCAGAGTATGAACTCGGTTGAGTGCAGAGATAAGTGCTTGAGGAATTGTTCTTGTATGGCTTATGCGAATTCGGATATTCGAGGAGAAGGCAATGGTTGTGCTTTGTGGTTTGGTGATCTTAATGACTTGAGAGTTCAACCAAATGCAGGGCAAGATCTTTATGTTAGAGTTCCTGCCTCAGAATTAGAGACAAGAAACGGAAGCAAGGTCAAGATAGAAATTGCAGTTGGAAGCACAATTTTTGTTGTATTATGTAGCTTGCTCTTAGTTCTCTACTTCACTTGCATAAGAGGAAGAAGTTCCAAGGCCAAAGAGAATGCAGCAATAATGGATAGTTTCATTGAAGAACAAGAGGGTCATCTAGAGCTTCCATTGTTTGATCTATCTAGTTTAGCTAAAGCTACTGGTAACTTTTCAATCAATAATAAGGTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGATTATTGAAAAATGGGCAAGAGATTGCTGTTAAAAGACTTCGTAGAGGTTCTGTACAAGGGCTCAAAGAATTCAAAAATGAAATTGCGCTGATTGTTAAACTTCAACATCGTAATCTTGTGAAGCTTCATGGATGTTGCATTCACAATGAAGAGAAAATGCTTGTATATGAATACTTGCCAAACAAAAGTTTGGATCTCTTCATATTTGATCAAACGCGGAGAAAGCTCTTGGATTGGTCGAAGTGCTTCCATATGATTTTTGGGATTGCAAAGGGTCTCCTTTATCTTCATCGAGATTCAAGACTTAGAATCATTCACAGAGATCTTAAAGCAAGTAATATCTTACTTGACAGTGAAATGAATCCTAAAATATCGGATTTTGGCATGGCTAGAATTTTGGGAGGAGACCAAATTGCAACAACGACGCGACGAGTGGTTGGAACATATGGATATATGGCACCAGAATACGCAATAGATGGAAACTTCTCAGTAAAATCTGATGTCTTTAGCTTTGGCGTTTTGTTACTGGAGATACTATCCGGAAAGAAAAACAAAGGAAATCATTGGGAAAATGAAAGCACAGACCTTATTGGTTATGCATGGGATTTGTGGACAGAAGAAAGGCCTCTAGAAATTGTTGATGATATCCTAAAAGAGTCTTGTAACCTCTCTGAAGTATTGAGATGCATTCAGATTAGTCTTCTTTGTTTGGAGCAACATCCATATGACAGACCAGACATGTCATCAGTGATTATGATGTTTGGAAGTGAAATTCCCTTGCCTAAGCCAAAGCAACCTGCTCTATTTGTTGGAGAATATGCATATCAATATGATTCTGCCAATGAATTAAGTATCGAAGTCTTAGAATCTAGATGA 1953 0.3958 MKVGKDLRTGFDWRVTAWKNENDPSPGTLNWVMDVTMWPEPMQRIGTVKQYNSGPWNGVQYSAKPTNKPSPAFEFIYFADENQVYYMFKLVNNSVKARMMLNQTTNKIMQLVWTQGVWKMYGSMPRDFCDEYGACGPNGKCDMAESPNDCECLRGYRPKSPKEWIGLNYEGGCLRDKPLNCESDGFIKYVKMKVPDTENCWYLNQSMNSVECRDKCLRNCSCMAYANSDIRGEGNGCALWFGDLNDLRVQPNAGQDLYVRVPASELETRNGSKVKIEIAVGSTIFVVLCSLLLVLYFTCIRGRSSKAKENAAIMDSFIEEQEGHLELPLFDLSSLAKATGNFSINNKVGEGGFGPVYKGLLKNGQEIAVKRLRRGSVQGLKEFKNEIALIVKLQHRNLVKLHGCCIHNEEKMLVYEYLPNKSLDLFIFDQTRRKLLDWSKCFHMIFGIAKGLLYLHRDSRLRIIHRDLKASNILLDSEMNPKISDFGMARILGGDQIATTTRRVVGTYGYMAPEYAIDGNFSVKSDVFSFGVLLLEILSGKKNKGNHWENESTDLIGYAWDLWTEERPLEIVDDILKESCNLSEVLRCIQISLLCLEQHPYDRPDMSSVIMMFGSEIPLPKPKQPALFVGEYAYQYDSANELSIEVLESR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1468 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Amo08g1468 650 SUPERFAMILY Protein kinase-like (PK-like) 326 634 IPR011009 -
Amo08g1468 650 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 635 - -
Amo08g1468 650 ProSiteProfiles Protein kinase domain profile. 342 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1468 650 SMART serkin_6 342 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1468 650 ProSiteProfiles PAN/Apple domain profile. 181 262 IPR003609 -
Amo08g1468 650 CDD STKc_IRAK 348 613 - -
Amo08g1468 650 Pfam PAN-like domain 181 247 IPR003609 -
Amo08g1468 650 Gene3D Phosphorylase Kinase; domain 1 302 417 - -
Amo08g1468 650 CDD PAN_AP_plant 178 262 - -
Amo08g1468 650 Pfam Protein tyrosine and serine/threonine kinase 343 611 IPR001245 GO:0004672|GO:0006468
Amo08g1468 650 Gene3D Transferase(Phosphotransferase) domain 1 418 617 - -
Amo08g1468 650 SMART ntp_6 181 261 IPR003609 -
Amo08g1468 650 Pfam S-locus glycoprotein domain 51 160 IPR000858 GO:0048544
Amo08g1468 650 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1468 Amo-Chr8 23973013 23976149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1468 261 629 Receptor kinase-like Gene Family AT4G05200 49.865 6.93e-121 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1468 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1468 - - adu:107462330 1340.48