Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1467 ATGGCTTATACTATAATTGGGAGTGGTTGCAAATTGTGGAGTGGTGATTTGTTTGATGTTAGGTTCGTTAAGGAAGGAGGTCAAGGTATCTATATTAGAACACCAGCTTCGGATAAAGCAGGGGAAAAGGGTGGTGGAGGGGGAAATCAAGGTAAAAATGAGGGATTGGTGGTAGGAATAGTTGTTGGGAGCACGATAATTGTGATTTCAGGGATGATTCTGGCTTCTTGTTGCTTTCTCAGGAAGAGAACACAGTCAAAAGCATTGGGACATGTAAGGATAAATGAGATGGTTAGTTATCAAACTCATACCAATGAACAAAAGGAAGATCTGGGGCTTCCATTATTTGATCTGAAAAGAATAGCTGTGGCCACTGATAATTTCTCCCCCAACAATAAGCTTGGAGAAGGCGGTTTTGGCCCCGTATACAAGGGTATACTAGATGATGGGCGACAAATTGCTGTGAAGAGGCTTTCGAGTAGTTCTGGTCAAGGCCTACATGAGTTCAAAACGGAAGTAAAACTAATAGCTAAACTTCAACACCGAAATCTTGTAAAGCTTTTCGGATGTTGCATCCAAGAAAAGGAGAAACTACTCATTTACGAATACATGCCTAACAGAAGTTTGGACTATTTTATTTTTGATCAAACACAAGGGAATGTTTTGGATTGGCCTAAGCGCTTTAATATCATTCGTGGGATTGCTAGAGGCTTGCTCTATCTTCATCAAGATTCAAGGTTGAGAATTATACATAGAGATCTTAAAGCAAGTAATGTTRTGTTAGATAATAAGTTGGACCCCAAGATATCAGACTTTGGTTTAGCTAGAAGTTTTGGAGGGGATCAGAGTAACGCAAATACAAACAGAGTTGTCGGAACTTTCGGATATATGGCTCCAGAATATGCTGTTAATGGACAATTTTCAGTCAAATCTGATGTCTTTAGCTTCGGAGTTTTAATAATTGAAATCGTATCCGGAAAGAGAAATAGAAAGTTTTATTATTCAAACAACAACGATAGCCTATATGGGCATGCATGGGATTTATGGAAGCAAGGAAGGTCACTAGAGCTTGTAGATGAAAGCCTCAAAGATTCATGGAATTTGAGTGAAGTAGAACGTTGTATCCACATTGGTCTCCTTTGTGCACAACAATATCCCCATGATAGGCCAACCATGTCTTCTGTGGTTCTAATGTTGGGAAGTGATTTTGATTTGCCTCTACCTGAAATTCCTACATTTTTCATTGTTGAACCTTTTGATGCTTCAAGCTCCTCCACTGGTAAAAATGACTTGAGCATTACAGAGATGGAAGCTCGATGA 1320 0.3932 MAYTIIGSGCKLWSGDLFDVRFVKEGGQGIYIRTPASDKAGEKGGGGGNQGKNEGLVVGIVVGSTIIVISGMILASCCFLRKRTQSKALGHVRINEMVSYQTHTNEQKEDLGLPLFDLKRIAVATDNFSPNNKLGEGGFGPVYKGILDDGRQIAVKRLSSSSGQGLHEFKTEVKLIAKLQHRNLVKLFGCCIQEKEKLLIYEYMPNRSLDYFIFDQTQGNVLDWPKRFNIIRGIARGLLYLHQDSRLRIIHRDLKASNVXLDNKLDPKISDFGLARSFGGDQSNANTNRVVGTFGYMAPEYAVNGQFSVKSDVFSFGVLIIEIVSGKRNRKFYYSNNNDSLYGHAWDLWKQGRSLELVDESLKDSWNLSEVERCIHIGLLCAQQYPHDRPTMSSVVLMLGSDFDLPLPEIPTFFIVEPFDASSSSTGKNDLSITEMEAR* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1467 439 Pfam Protein tyrosine and serine/threonine kinase 131 397 IPR001245 GO:0004672|GO:0006468
Amo08g1467 439 ProSiteProfiles Protein kinase domain profile. 128 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1467 439 SUPERFAMILY Protein kinase-like (PK-like) 112 422 IPR011009 -
Amo08g1467 439 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 425 - -
Amo08g1467 439 SMART serkin_6 128 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1467 439 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-1 7 425 - -
Amo08g1467 439 Gene3D Transferase(Phosphotransferase) domain 1 204 404 - -
Amo08g1467 439 CDD STKc_IRAK 134 399 - -
Amo08g1467 439 Gene3D Phosphorylase Kinase; domain 1 88 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1467 Amo-Chr8 23957424 23960319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1467 48 413 Receptor kinase-like Gene Family AT4G23230 53.134 3.10e-130 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1467 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1467 - - aip:107610641 854.744