Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1459 ATGTCCCATCCTGCGGTCTGGAATTGGAACTCATCACAACACCGAAAAAATAAAACGCAGATGATGGAAGTGGTTCTGAGTTTGATGCTAATTAGCAGTGCTAATTTTCTATTAACTGAAGAGAGCCAAAACGACAGCGTATCATCCTCTTCTGGAGGAAACGAAAGCTACTGCGACTTCCCTGGAATTTGCGGACCCAATGGAAACTGCGATGTTAATAAGCCGCTAGCTTGTGGATGCTTGGATGGTTTCACACCCAAGTCTCCCACTGCCTTCGATAGCCTCGACTACACGCACGGCTGCGTCAGAAAGAAACCATTCAATTGTAGCACCGACGTCTTCGTTGCCTATGCTGTGTTCCAAGAACCCACTGGCACGTCTTATTATCATTCTTTCTTCAACCAAAGTTTGAAAGCCGAGGGTTGCAAGGAGAAATGCAAGAGTAACTGTTCTTGCATGGCGGCTTATACAGAAATTGAGAGTGGTGAATGCAAATTGTGGAGTGGTGATTTGTTTGACGTTAGGGTCATACAGGAAGGACGCCAATATCTTTATATTCGAATGCCTGCTTTTGACCAAGCAGAGCCCGGAGGCCGAAGTCACCGGCGCAGCGACCATAAGGTGGTGGGAGTAGTTGTTGGCAGTGCTGCTGTTGTGATTTTGGGTATGATCTTGGCTTCTTGGTACATGCTCACCAAAAAAACAGAGCCACAAGCATTGGGAGAAGTAAGGATTGGTGAGATGCTTAGTCAGACCAATGAACAAGAAGGGGATCTGGAGCTTCCATTACTTGACCTATCAAGAATAGCTATGGCTACTGATAACTTTTCTCTCAATAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGCGTATTAGATGATGGACAACAAATTGCTGTAAAGAGACTTTCAAGAAGTTCTGGACAGGGTTTAAATGAATTTAAAACTGAGGTCAAACTAATAGCCAAACTTCGACACCGTAATCTTGTAAAACTTCTTGGTTGTTGCATTCATGAGGAAGAGAAATTGTTGGTATATGAATACATGCCTAACAGAAGTTTAGACTATTTTATTTTTGATCAAATGCGAAAGAAGACTTTGGATTGGCCTAAGCGCTTTAACATCATTTGTGGAATTGCTAGGGGCTTATTATATCTTCATCAAGATTCAAGACTAAGGATTATACATAGAGATCTTAAAGCATGGGATCTATGGAAACAAGGAAGGTCATTAGAATTGGTGGATGAATGGTTGAAGGAGACATGGAATGTGTCTGAAGTGCAACGTTGCATCCACATCAGCCTCCTATGTGCACAACAGCATCCCCAAGATAGGCCAACCATGTCATCAGTGGTTCTCATGCTTGGAACTGAAATTGATTTACCTCAACCCAAATATCCTACGTTTTTTGTTGCTGAATCTTCTGAAGGCACAAGTTCCTCCTCTTGTAAAAACGAATTGAGCGTTACAGAATTGGAACCTCGATAA 1497 0.4269 MSHPAVWNWNSSQHRKNKTQMMEVVLSLMLISSANFLLTEESQNDSVSSSSGGNESYCDFPGICGPNGNCDVNKPLACGCLDGFTPKSPTAFDSLDYTHGCVRKKPFNCSTDVFVAYAVFQEPTGTSYYHSFFNQSLKAEGCKEKCKSNCSCMAAYTEIESGECKLWSGDLFDVRVIQEGRQYLYIRMPAFDQAEPGGRSHRRSDHKVVGVVVGSAAVVILGMILASWYMLTKKTEPQALGEVRIGEMLSQTNEQEGDLELPLLDLSRIAMATDNFSLNNKLGEGGFGPVYKGVLDDGQQIAVKRLSRSSGQGLNEFKTEVKLIAKLRHRNLVKLLGCCIHEEEKLLVYEYMPNRSLDYFIFDQMRKKTLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKAWDLWKQGRSLELVDEWLKETWNVSEVQRCIHISLLCAQQHPQDRPTMSSVVLMLGTEIDLPQPKYPTFFVAESSEGTSSSSCKNELSVTELEPR* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1459 498 Pfam PAN-like domain 109 174 IPR003609 -
Amo08g1459 498 SMART ntp_6 109 188 IPR003609 -
Amo08g1459 498 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 404 - -
Amo08g1459 498 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 403 488 - -
Amo08g1459 498 Gene3D Transferase(Phosphotransferase) domain 1 352 405 - -
Amo08g1459 498 CDD PAN_AP_plant 140 189 - -
Amo08g1459 498 SUPERFAMILY Protein kinase-like (PK-like) 262 474 IPR011009 -
Amo08g1459 498 ProSiteProfiles PAN/Apple domain profile. 109 190 IPR003609 -
Amo08g1459 498 Pfam Protein tyrosine and serine/threonine kinase 277 404 IPR001245 GO:0004672|GO:0006468
Amo08g1459 498 Gene3D Transferase(Phosphotransferase) domain 1 406 471 - -
Amo08g1459 498 ProSiteProfiles Protein kinase domain profile. 276 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1459 498 Gene3D Phosphorylase Kinase; domain 1 242 351 - -
Amo08g1459 498 Pfam S-locus glycoprotein domain 45 88 IPR000858 GO:0048544
Amo08g1459 498 PANTHER - 403 488 - -
Amo08g1459 498 PANTHER - 16 404 - -
Amo08g1459 498 MobiDBLite consensus disorder prediction 478 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1459 Amo-Chr8 23892857 23896240 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1459 253 407 Receptor kinase-like Gene Family AT4G23130 60.759 6.87e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1459 PK_Tyr_Ser-Thr 3.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1459 - - adu:107462470 796.964