Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1456 ATGGGAAACTTCATTATTGTTATACCAATTATATGTTTCTGCTTTGTCTTTCCAATCTCCAAAATCAAAGCAGAAACTGATACCATCACTCACTTCCAGTCTCTAAGTAAAAACCAGACCTTAGTTTCCAAGAATGGAGAATTTGAACTTGGTTTCTTCGCTCTTGATAACTCTACCAACCATTACTACCTTGGCATTTGGTACAAAAAAATCCCAGGCCAAACCATTGTATGGGTGGCAAACCGTGAAAAACCGGCCACAAATCCAAACTTTGTTCTATTGATTATAAACAACACAACAAATAACACACTTCTCCTTAGTCACAACAACAATGTTGTATGGTCCGTGAGCGTAGCAAGAAAACCAAAGAATCCAGTTCTGCAGCTCTTGGATTCAGGGAATCTTGTTCTAAGAGAACAAAACAATGATGATGAGAATGAAGAAAAGAATTATGTATGGCAAAGCTTTGATTACCCTGGTGATACACTCTTGCCAGGGATGAAGCTTGGTAAGGATTTGAGGACGGGTTTCGTTAGGCGCTTAACGGCGTGGAAGAACAAGAAAGATCCTTCACCAGGAACCTTTAATTGGGAAATGGATGTGACTAAGTGGCCAGAACCAATGCAACGAATAGGATCAATGAAACAGTTCAGCTCTGGACCATGGATTGGAGTGGACTATGGTAGCAAACCAACGAGAAAGAACCCATCGACCTTTGAATATGTTTACTTCTCCAACAAGGATGAAGTGTACTTCTCATTCTACCTCCTTAATAACAATTCAGTTTCCACGAGGATGGTGTTGGATCAAGCCACCTACAGGCGTCTGTATTTGGTTTGGATTAATTCTGACCAAGAATGGCTGGTTTATAATTCACTGCCAAGAGTCTTTTGCGAGCGATATGGAGTTTGTGGTCCTAATTCCAATTGTGATTGGGATAAGTCCGCTTGTGATTGTTTGAGAGGGTTTAGGCCTAACCACACAGGAGGTTGCTTGCGCGACAAGCCACTGAATTGCGAAAGTGATGGGTTTGTTAAGTATGTGAAGATGAAAGTGCCTGATACTTCGAATTGTTTGTACCTGAATCAGAGCATGAACCTTGTTGAGTGCAGAGACAAATGCCTGAGGAATTGTTCTTGCGTGGCTTATGCAAATTCGGATATCAGAGGAGAAGGCAGTGGTTGTGCTTTGTGGTTTGGTGACCTTAATGATTTGAGGACTCTACCAGATGCAGGCCAAGATCTTTATATTAGAGTGCCAGCTTCAGAATTAGAGACAAAGAATGGACGCAAGATCAAGATAGGAATTGCAGTGGGAGTCACAATTGGCGTATTATGTGGCCTGGTCTTAGTTTTCTTTTTGGTCCGTAAAGGACGAACAAGGAGCATTTTAAAAGATCGTTCCAAGGAAGAACAAGAGGAAGATCCAAAGGTCCCATTGTATGACCTATCAGTTATAGTTTCTTCCACTGATAACTTTTCGCACAAAAACAAGCTTGGAGAAGGTGGATTTGGATCTGTATTTAAGGGAACATTAGAAAATGGACAAAGAATAGCAGTTAAGAGGCTCTCAAGCGGTTCTGGACAAGGGATCAAGGAATTTAAGAATGAAATTGCATTAATTGCCAAACTTCAGCACCGTAATCTCGTCAAGCTGCAAGGATATTGCATTCAGAATGAAGAGAAATTACTTATATATGAATATATGCCTAACAAAAGCTTGGATTTTTTTATATTTGATCAAACGAAAAAAAGGGTTTTGGATTGGAATACACGATTTAATATCATTCTCGGTATAGCGAAAGGACTTCTTTATCTTCATCAAGATTCAAGACACAGAGTTATTCATCGAGATCTCAAGGCAAGTAATGTTTTACTTGATGATGAGATGAATCCAAAGATCTCAGATTTTGGTTTAGCTCGAATTTTAGGAGGAGACCAGACCACAGAAATTACACGTTGTGTTGTTGGAACATATGGATACATAGCACCAGAATATGCGATAGATGGAAATTTCTCAGTAAAATCAGACGTTTTCAGTTTTGGTGTTTTATTGCTGGAGATAGTATCAGGAAAGAAAAATAGAGGAGACCAACATCAAAACCAAAATACAAATCTTATTGAACAAGCATGGAATTTGTGGATTGAAGGGAGGCCTTTAGATTTGATAAGTGAAGACTTTAAAGAATCTTGCAACGGCTCCGAAGCATTGCGTTGCATCCATATTAGTTTTCTGTGTCTTCAACAGCATCCACATGACAGGCCAAGCATGTCGTTTGTGATTATGATGTTAGATAGTGAGATTTGCTTGCCTCAACCAAAACAACCAGCTCTGTTTGTTGGAGAATATTATTCTTCGTTAAATAAGAGTAATTTAATTTCTGGTAATGAATTAAGTATGTCCATTTTGGAAGCACGTTAA 2421 0.3916 MGNFIIVIPIICFCFVFPISKIKAETDTITHFQSLSKNQTLVSKNGEFELGFFALDNSTNHYYLGIWYKKIPGQTIVWVANREKPATNPNFVLLIINNTTNNTLLLSHNNNVVWSVSVARKPKNPVLQLLDSGNLVLREQNNDDENEEKNYVWQSFDYPGDTLLPGMKLGKDLRTGFVRRLTAWKNKKDPSPGTFNWEMDVTKWPEPMQRIGSMKQFSSGPWIGVDYGSKPTRKNPSTFEYVYFSNKDEVYFSFYLLNNNSVSTRMVLDQATYRRLYLVWINSDQEWLVYNSLPRVFCERYGVCGPNSNCDWDKSACDCLRGFRPNHTGGCLRDKPLNCESDGFVKYVKMKVPDTSNCLYLNQSMNLVECRDKCLRNCSCVAYANSDIRGEGSGCALWFGDLNDLRTLPDAGQDLYIRVPASELETKNGRKIKIGIAVGVTIGVLCGLVLVFFLVRKGRTRSILKDRSKEEQEEDPKVPLYDLSVIVSSTDNFSHKNKLGEGGFGSVFKGTLENGQRIAVKRLSSGSGQGIKEFKNEIALIAKLQHRNLVKLQGYCIQNEEKLLIYEYMPNKSLDFFIFDQTKKRVLDWNTRFNIILGIAKGLLYLHQDSRHRVIHRDLKASNVLLDDEMNPKISDFGLARILGGDQTTEITRCVVGTYGYIAPEYAIDGNFSVKSDVFSFGVLLLEIVSGKKNRGDQHQNQNTNLIEQAWNLWIEGRPLDLISEDFKESCNGSEALRCIHISFLCLQQHPHDRPSMSFVIMMLDSEICLPQPKQPALFVGEYYSSLNKSNLISGNELSMSILEAR* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1456 806 PIRSF SRK 1 806 IPR024171 GO:0004674
Amo08g1456 806 SMART ntp_6 339 419 IPR003609 -
Amo08g1456 806 Pfam Protein kinase domain 494 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1456 806 Pfam PAN-like domain 339 405 IPR003609 -
Amo08g1456 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Amo08g1456 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 190 IPR036426 -
Amo08g1456 806 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Amo08g1456 806 CDD STKc_IRAK 499 765 - -
Amo08g1456 806 CDD PAN_AP_plant 336 420 - -
Amo08g1456 806 Pfam D-mannose binding lectin 75 185 IPR001480 -
Amo08g1456 806 PANTHER - 27 803 - -
Amo08g1456 806 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524
Amo08g1456 806 ProSiteProfiles Protein kinase domain profile. 493 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1456 806 ProSiteProfiles Bulb-type lectin domain profile. 26 150 IPR001480 -
Amo08g1456 806 Gene3D - 19 156 IPR036426 -
Amo08g1456 806 SMART serkin_6 493 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1456 806 CDD B_lectin 33 159 IPR001480 -
Amo08g1456 806 SUPERFAMILY Protein kinase-like (PK-like) 476 788 IPR011009 -
Amo08g1456 806 Gene3D Transferase(Phosphotransferase) domain 1 569 770 - -
Amo08g1456 806 SMART blect_4 32 159 IPR001480 -
Amo08g1456 806 Gene3D Phosphorylase Kinase; domain 1 456 568 - -
Amo08g1456 806 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Amo08g1456 806 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1456 Amo-Chr8 23841862 23845161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1456 428 779 Receptor kinase-like Gene Family AT4G23190 50.689 9.06e-120 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1456 Pkinase 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1456 - - ahf:112769120 1125.15