Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1455 ATGCTCTTGGATTGGTCGAAGCGCTTTCAAATAATTTGTGGAATTGCAAGGGGCATTCTTTATCTTCATCAAGATTCAATACTAAAAATCATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATAGTGATATGAATCCTAAAATATCAGACTTTGGTTTGGCCAAAATTTTTAAAGGAGATCAAAGTGCAGAAACTACGGGTCGAGTGGTTGGAACCTATGGATACATGGCACCAGAATATGCAATAGACGGAAATTTTTCAGTGAAATCTGATGTCTTCAGCTTTGGCATTTTGCTGCTGGAGATAGTATCCGGAAAGAAGAACAAAGCAAACCATCATGATAACGAAAGTACATACCTTGTTGGATACGTAAGTATAGATCAGCTATCATTTGATCATGTCTATCCAAACTTATACTTCACAATGAATGCTACATAA 444 0.3581 MLLDWSKRFQIICGIARGILYLHQDSILKIIHRDLKASNVLLDSDMNPKISDFGLAKIFKGDQSAETTGRVVGTYGYMAPEYAIDGNFSVKSDVFSFGILLLEIVSGKKNKANHHDNESTYLVGYVSIDQLSFDHVYPNLYFTMNAT* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1455 147 SUPERFAMILY Protein kinase-like (PK-like) 2 126 IPR011009 -
Amo08g1455 147 ProSitePatterns Serine/Threonine protein kinases active-site signature. 30 42 IPR008271 GO:0004672|GO:0006468
Amo08g1455 147 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1455 147 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 125 - -
Amo08g1455 147 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 2 125 - -
Amo08g1455 147 SMART serkin_6 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1455 147 Gene3D Transferase(Phosphotransferase) domain 1 1 140 - -
Amo08g1455 147 Pfam Protein tyrosine and serine/threonine kinase 4 119 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1455 Amo-Chr8 23830555 23832449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1455 3 112 Receptor kinase-like Gene Family AT4G23230 73.636 2.26e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1455 PK_Tyr_Ser-Thr 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1455 - - aip:107610641 205.297