Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g1454 | ATGACAACTAGAGAGAAGAGAAGAAAAGCTGCAGGCAGAAGCATAGAGCGGATGGAAATGGTTCTGAAGTGGATGCTAATAATTAGTAGTGCTCATTTTGTCTTAACTCAACGGAACCAAAGCGAAAAGAGCTACTGCGACTACCCTGGAATTTGTGGACCCAATGAGAACTGCGACGTTAATAAGGCGCAAGCTTGTGAATGCTTGGATGGTTTCACACCTAGGTCTCTCACTGCCTTCGGTAGCCTCGACCTTACGCAGGGGTGTGTCAGAAAGAAACCACTCGACTGTAGCACCGATGTGTTTGTTACCTATCCTGTGCTCCAAGAACCCACTGGAAATGGCACGTATTATTCTGTGCTGGACCAGAGTTTGGGTTGCAAGGAGAACTGCAAGAGTAATTGTTCTTGCATGGCTGCTTATACAACTGGCAGCGGTGGATGCAAATTCTGGAGTGCTGATTTGTCTGATATTAGGGTCATACAGGGAGGACACCAATATCTTTATATTAGAATGCCGGCTTTCGACCAAGTAGCAGAACCCGGACACCAAAGTCACAGGCGCAACGAGCATCATATGGTGGTGGGAGTAGTTGTTGGCAGCGCTGTTCTGATTTTGGGGGTGATCTTGGCTTCTTGGTACATGCTCGCTAAAAGAACAAAGTCAAAAGCATTGGGAGATATAAGTATTAGTGAGATGTTTAGTGATACCAATGAACAAGAAAGAGAGCTGGACCTTCCATTACTTGACCTATCAAGAATAGTTATAGCAACTGCTAACTTTTCTCTCAACAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGTGTATTAGATGATGGACAAGAAATTGCTGTTAAGAGGCTTTCAAATAATTCTAAGCAAGGCTTAAATGAATTCAAAACCGAGGTGAAATTAATAGCCAAACTTCGACATCGTAATCTTGTGAAACTTCTTGGTTGTTGCATTCAAAAAGGAGAAATTAATATTCACCTAATATTTTTCAATATTGTTGGACAGCATACTTACAAGCCTTAA | 1044 | 0.4253 | MTTREKRRKAAGRSIERMEMVLKWMLIISSAHFVLTQRNQSEKSYCDYPGICGPNENCDVNKAQACECLDGFTPRSLTAFGSLDLTQGCVRKKPLDCSTDVFVTYPVLQEPTGNGTYYSVLDQSLGCKENCKSNCSCMAAYTTGSGGCKFWSADLSDIRVIQGGHQYLYIRMPAFDQVAEPGHQSHRRNEHHMVVGVVVGSAVLILGVILASWYMLAKRTKSKALGDISISEMFSDTNEQERELDLPLLDLSRIVIATANFSLNNKLGEGGFGPVYKGVLDDGQEIAVKRLSNNSKQGLNEFKTEVKLIAKLRHRNLVKLLGCCIQKGEINIHLIFFNIVGQHTYKP* | 348 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g1454 | 347 | Pfam | S-locus glycoprotein domain | 40 | 75 | IPR000858 | GO:0048544 | |
Amo08g1454 | 347 | Pfam | Protein tyrosine and serine/threonine kinase | 262 | 332 | IPR001245 | GO:0004672|GO:0006468 | |
Amo08g1454 | 347 | ProSiteProfiles | Protein kinase domain profile. | 261 | 347 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo08g1454 | 347 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 38 | 329 | - | - | |
Amo08g1454 | 347 | SUPERFAMILY | Protein kinase-like (PK-like) | 242 | 331 | IPR011009 | - | |
Amo08g1454 | 347 | ProSiteProfiles | PAN/Apple domain profile. | 97 | 174 | IPR003609 | - | |
Amo08g1454 | 347 | Pfam | PAN-like domain | 97 | 158 | IPR003609 | - | |
Amo08g1454 | 347 | PANTHER | - | 38 | 329 | - | - | |
Amo08g1454 | 347 | CDD | PAN_AP_plant | 94 | 173 | - | - | |
Amo08g1454 | 347 | Gene3D | Phosphorylase Kinase; domain 1 | 223 | 335 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g1454 | Amo-Chr8 | 23793039 | 23804740 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g1454 | 170 | 329 | Receptor kinase-like Gene Family | AT4G04500 | 44.578 | 7.48e-29 | 114 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Amo08g1454 | PK_Tyr_Ser-Thr | 2.2e-12 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g1454 | - | - | ahf:112705338 | 612.068 |