Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1453 ATGCCTAACAAAAGCTTGGATTTTTTTATATTTGATCAAACGAAAAAAATGGTTTTGGATTGGCATACACGATTTAATATCATTCTCGGTATAGCAAAAGGACTTCTTTATCTTCATCAAGATTCAAGACATAGAGTTATTCATCGAGATCTCAAAGCAAGTAATGTTTTACTTGACGATGAGATGAATCCAAAGATCTCAGATTTTGGTTTAGCTCGAATTTTGGGAGGAGACCAGACCACAGAAATTACACAATGCGTTGTTGGAACATATGGATACATAGCACCAGAATATGCAATAGATGGAAATTTCTCGGTAAAATCAGACGTTTTCAGTTTTGGTGTTTTATTGCTGGAGATAGTATCAGGAAAGAAAAATAGAGGAGACCAACGTCAAAACGAAAATACAAATCTTATTGAACAAGCATGGAATTTATGGATTGAAGGGAGGCCTTTAGATTTGATAAATGAAGACTTAAAAGAATCTAGCAACAGCTCTGAAGCATTGCGATGCATCCATATTAGTTTTCTGTGTCTTCAACAGCATCCACATGACAGGCCAAACATGTCGTTTGTGATTATGATGTTAGATAGTGAGATTGGCTTGCCTCAACCAAAACAACCAGCTCTATTTGTTGGAGAATATTCTTCGTTAAATAAGAGTAATTTACTTTCTGTTAATGAATTAAGTATGTCCATTTTGGAAGCACGTTAA 714 0.3487 MPNKSLDFFIFDQTKKMVLDWHTRFNIILGIAKGLLYLHQDSRHRVIHRDLKASNVLLDDEMNPKISDFGLARILGGDQTTEITQCVVGTYGYIAPEYAIDGNFSVKSDVFSFGVLLLEIVSGKKNRGDQRQNENTNLIEQAWNLWIEGRPLDLINEDLKESSNSSEALRCIHISFLCLQQHPHDRPNMSFVIMMLDSEIGLPQPKQPALFVGEYSSLNKSNLLSVNELSMSILEAR* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1453 237 Pfam Protein kinase domain 15 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1453 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Amo08g1453 237 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1453 237 Gene3D Transferase(Phosphotransferase) domain 1 1 202 - -
Amo08g1453 237 SMART serkin_6 3 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1453 237 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 230 - -
Amo08g1453 237 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 230 - -
Amo08g1453 237 SUPERFAMILY Protein kinase-like (PK-like) 1 218 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1453 Amo-Chr8 23776745 23778182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1453 1 212 Receptor kinase-like Gene Family AT4G23230 57.277 3.12e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g1453 Pkinase 3.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1453 - - ahf:114924040 420.239