Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1450 ATGAAGGATTTTCTTGTGCATTATGTGTTCAATCCTGCACTGGTTGGAGGAAGTTTGGCAGATACTATAACATTTGAGGATTTTGTTACACTTGAACATTCTCATTACATTTATAATAGAGTCAATTTTGGGATGGATCCTAGTCAAAATCACAAGGGCTCCCAAAAACCTAGAAAGTTTGATAATTGGTGTGTGCTCTGCAGGCATAGAAACTTAGGAAACTTGCCTATAATCATTATCCCAGCTATATGCAAAGATAAAGGTAGCCCTTTTGGAGATCCTGATGTCTGCTATGGATCGTTGGCTACTCGTGTTATCAAACATTACAACAAGTTAAACCAAAGGATGCCACTTATATATGTGAAGCTATACAGATACCAGATCTTTAGGGAATTGTCTTATATTCATCGTTGTATTGGAGTTTGTCACCGTGATATCAAGCCTCAAAATCTATTGATAGGTACTCTGACTAGTGATATTGCTAATATGAATGATGTTTTGCTTGTCAAGTCTGCTGGCTTAAAGAAGAATCAGATATGGTTGGAGAAGAGATATGTTGGGTCTTGCCACACCTCGGAATGGTTCAATACTGCAGGCAGAAGTATTAAGACAGAACTCATTGCTAGTGTCATTGTTTCACAGGTAATCATTTTTGTTGGATCAAACACTTATATTCGTGGACATGGGATGCTACAATCTTGCAAAGCTCAAATGTTGCTTGGAAATATGGGGTCAGTGGTCCTTTCTGGTATGCTAGTGGAGTAA 765 0.3817 MKDFLVHYVFNPALVGGSLADTITFEDFVTLEHSHYIYNRVNFGMDPSQNHKGSQKPRKFDNWCVLCRHRNLGNLPIIIIPAICKDKGSPFGDPDVCYGSLATRVIKHYNKLNQRMPLIYVKLYRYQIFRELSYIHRCIGVCHRDIKPQNLLIGTLTSDIANMNDVLLVKSAGLKKNQIWLEKRYVGSCHTSEWFNTAGRSIKTELIASVIVSQVIIFVGSNTYIRGHGMLQSCKAQMLLGNMGSVVLSGMLVE* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1450 254 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1450 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Amo08g1450 254 Pfam Protein kinase domain 114 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1450 254 Gene3D Transferase(Phosphotransferase) domain 1 101 181 - -
Amo08g1450 254 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 103 160 - -
Amo08g1450 254 SUPERFAMILY Protein kinase-like (PK-like) 81 162 IPR011009 -
Amo08g1450 254 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 103 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1450 Amo-Chr8 23742421 23744771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1450 179 214 Organic Solute Cotransporters AT5G45380 83.333 2.68e-13 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Amo08g1450 Pkinase 7.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1450 K00924 - aip:107646954 264.618