Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1414 ATGAAAGAGGAATCAACAGGACTAATCATTGGGATCTCCATAGGTGTAGTTATTGGAGTTGTTCTTGCAATTTCTGCACTTTTCTGCTTTAGATACCATAGGAAGCGTTCACAGATTGGGAACAGCAGTTCCAGGAGGGCAGCCACCATACCAATTCGCGCAAATGGTGCCGATTCGTGTACTATTCTCTCTGACTCAACCTTAGGTCCAGAATCACCTGTGAAGGCCGCGTCGCGAAACGGGGGCATGTCCTTCTGGCTTGATGGATTTAAGAAGAGTAGCATGGTTTCAGCATCTGGTATACCAGAATATTCTTACAAGGATTTGCAGAAAGCAACCTATAATTTTACAACACTCATAGGACAAGGTGCCTTTGGTCCTGTTTATAAAGCTCAGATGTGTACTGCGGAGACTGTTGCGGTTAAAGTTCTTGCAACAAATTCCAAGCAAGGGGAAAAAGAATTTCACACCGAGGTTATGTTGTTGGGAAGGTTGCATCATAGAAACCTGGTCAATTTGGTTGGATATTGTGCAGAAAAGGGGCAACATATGCTTGTATATGTTTACATGAGTAAAGGCAGCTTGGCTTCCCACTTGTACAGCGAAGAGAATGGGACGCTGGGTTGGGATTTGAGGGTGCACATAGCTTTAGATGTAGCAAGAGGCTTGGAATATCTTCATGATGGAGCAGTTCCTCCTGTAATCCATAGAGATATCAAGTCTAACAATATTCTCTTGGACCAGTCGATGCGAGCCAGGGTTGCTGATTTTGGGCTTTCAAGAGAAGAGGTGGTAGATAAACAGGCAGCAATTCGCGGAACCTTTGGATACCTTGATCCTGAGTATATATCTTCGGGAACATTCACTAAGAAGAGTGATGTTTATAGTTTCGGTGTGTTGCTCTTTGAACTTATAGCTGGAAGAAATCCACAGCAGGGTCTAATGGAATATGTTGAACTTGCGGCAATGAACACAGATGGAAAAGTTGGTTGGGAGGAGATTGTTGATTCTAGGCTAGAGGGTAAGTGTGACTTTCAAGAGCTCAATGAAGTCGCGGCCCTTGCCTACAAGTGCATCAACCGTGCTCCGAGGAAGCGGCCGTCCATGAGGGACATCGTGCAGGTGCTGACGAGGATTGCGAAGTCTCGGCACCACAAGAATCATCACCACCACAAAAAGTCCTTGTCAGCAACAACAGCAGATGAAGTTTCCATTGATGTTGATAATCAAGAGACCAAGGTTACTGCTGTTTCTCAACACAGGAGAGAAGAGTCTATAGATAGTGCAGCTGACATGTATGATGTGTAG 1308 0.448 MKEESTGLIIGISIGVVIGVVLAISALFCFRYHRKRSQIGNSSSRRAATIPIRANGADSCTILSDSTLGPESPVKAASRNGGMSFWLDGFKKSSMVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMCTAETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGSLASHLYSEENGTLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSNNILLDQSMRARVADFGLSREEVVDKQAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTDGKVGWEEIVDSRLEGKCDFQELNEVAALAYKCINRAPRKRPSMRDIVQVLTRIAKSRHHKNHHHHKKSLSATTADEVSIDVDNQETKVTAVSQHRREESIDSAADMYDV* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1414 435 MobiDBLite consensus disorder prediction 398 414 - -
Amo08g1414 435 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 408 - -
Amo08g1414 435 SMART serkin_6 114 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1414 435 Gene3D Phosphorylase Kinase; domain 1 88 189 - -
Amo08g1414 435 MobiDBLite consensus disorder prediction 415 429 - -
Amo08g1414 435 ProSiteProfiles Protein kinase domain profile. 114 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1414 435 Gene3D Transferase(Phosphotransferase) domain 1 190 405 - -
Amo08g1414 435 Pfam Protein tyrosine and serine/threonine kinase 116 376 IPR001245 GO:0004672|GO:0006468
Amo08g1414 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Amo08g1414 435 MobiDBLite consensus disorder prediction 382 435 - -
Amo08g1414 435 SUPERFAMILY Protein kinase-like (PK-like) 103 389 IPR011009 -
Amo08g1414 435 PANTHER OS01G0253100 PROTEIN 5 408 IPR045271 GO:0004714|GO:0006468
Amo08g1414 435 CDD STKc_IRAK 120 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1414 Amo-Chr8 22990074 22994267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1414 24 376 Glycoside Hydrolase AT3G07070 38.978 4.04e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Amo08g1414 PK_Tyr_Ser-Thr 4.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1414 - - gmx:100799586 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1238 18 21784042 21787121 Amo08g1414 08 22990074 22994267 hybridization