Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1410 ATGCCAACAGTGTGGTTCTCACTGAAGAGGTCACTACACTGCAAATCAGATGCATCAGAAGTTCATGATCCTAAATCAAGGAAGCAGCAATTGAGCACAATCTTAACCACAAAGAGGGCATCAGGTAGGTCAGGATGCTCAAGGTCCATTGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCACATTGAGAAGCCACCAACTTGCAGCCCAAGATCCATAGGTAGCAGTGAGTTCCTCAACCCAATAACACATGAAGTCATCTTGAGCAATTCAAGGTGTGAACTCAAAATCACTGGCTATGGTGGAGGCTTCCATGAAGGGCTTGGAACTGTTGGTAACAATGGTAATAACAACAATGGTGGTGCTCTTGGTAGTGAAAATTCAACCTTTGTTGGAACTTTAAGGCCTGGTACCCCTGGACCTGGAGGGCACCCTACAATGCACTACTTTAACCCTTCCTTTAGGCCTTCAACCACCCCACCAAGGAAATCTCCTTTCCTTTTAGGAGATAGTAATAAAGAAGGGTCTGGCTTCCATGGTGGTGGTGGTGGTGGTGCTGGATTTCATCATTCAAGCAATAGATTGTCTCTTGAGACAGATTCCAATGGGGCTTGCACTGTTACTTGTCACAAATGTGGAGAGCAATTCACCAAATGGGATGCTGCTGAAGCTCATCATCTCTCCAAGCATGCTGTAACTGAACTTGTGGAAGGTGATTCTTCAAGAAAAATAGTGGAGATAATATGCAGGACAAGCTGGTTGAAATCAGAGAACCAATGTGGTAGAATTGAGAGAGTGTTGAAAGTGCACAACATGCAGAAGACATTGGCAAGGTTTGAAGAATACAGAGAGATGGTGAAGATCAAAGCAAGCAAGCTCCAAAAGAAGCATCCAAGGTGCCTTGCTGATGGGAATGAACTCTTAAGGTTCTATGGAACTACAGTTGCATGTTCCTTAGGCCTCAATGGCTCTTCAAGCCTTTGTTTATCTGAGAGATGCTGTGTTTGTAGGATCATAAGAAATGGTTTTTCAGCCAAGAAGGAACTCAAGGGTGGAATTGGTGTTTTCACCACTTCAACAAGTGGAAGAGCCTTTGAATCCATTGAGGTAATTGATCAAGACCCTTCACTGAGAAAAGTGTTGATAGTGTGTAGAGTTATTGCTGGTAGGGTCCATAGGCCTCTAGAGAACATTCAAGAGATTGCAGGCCAAACAGGATTTGATTCTCTGGCTGGGAAAGTTGGTCTTTATTCAAATATTGAGGAGCTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTGATTTGCAAACCCTGA 1332 0.4369 MPTVWFSLKRSLHCKSDASEVHDPKSRKQQLSTILTTKRASGRSGCSRSIANLKDVIHGSKRHIEKPPTCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGGFHEGLGTVGNNGNNNNGGALGSENSTFVGTLRPGTPGPGGHPTMHYFNPSFRPSTTPPRKSPFLLGDSNKEGSGFHGGGGGGAGFHHSSNRLSLETDSNGACTVTCHKCGEQFTKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSERCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEVIDQDPSLRKVLIVCRVIAGRVHRPLENIQEIAGQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 444
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1410 443 ProSitePatterns Zinc finger C2H2 type domain signature. 211 232 IPR013087 -
Amo08g1410 443 SUPERFAMILY ADP-ribosylation 234 442 - -
Amo08g1410 443 MobiDBLite consensus disorder prediction 173 194 - -
Amo08g1410 443 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 443 - -
Amo08g1410 443 Gene3D - 223 442 - -
Amo08g1410 443 PANTHER - 2 443 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo08g1410 Amo-Chr8 22956895 22959489 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1410 1 443 C2H2 Transcription Factor Family AT5G54630 66.314 0.0 574
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Amo08g1410 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1410 - - gmx:100787790 713.761