Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1406 ATGGTGGGGACTCCTATTAATGGAAGAGCAAGGCCAGCTTTTGCAGTTGTAAATGGTGGAAATGATCAACAACATGGCCCTAGTAGTGATCCACCTAGCAATGCTGGGTCAGATTATGGTGTTATAGAGTTCACTAGAGAGGATGTTGAAGCCTTGCTAAATGAAAAGTCCAAAAGGAAAGACAGATTCAATTATAAGGAAAGATGTGAAAATATGGCAGATTATATAAAGAGGCTTAAGGTTTGCATAAGATGGTTCCAAGACCTTGAGATAAGCTACTCATTAGAGCAAGAAAAATTGAAGAGTTCATTGGAATTAGCCCAGCAAAAATGCATGGAGATAGAGTTGCTGCTTAAAATCAAGGAAGAAGAACTGAATTCAATTATTGTGGAAATGAGAAGGAATTGCACTTCTTTGCAAGAGAAGTTAATAAAGGAAGAAACAGAAAGATCAGCGGCAACGGAATCTCTTGTTCAAGAGAAAGAGGCTCGGATTAACCTTGAGAGGTCTCAGACTGCACTAACAGAAGACCTCAGCAGAGCTCAGCGAGAGCTCGAAAGCTCAAATCAGAAGATATCATCACTCAATGAGATGTATAAGCGGTTACAAGATTACATAACAAGCTTACAGCAGTACAATGGAAAGCTTCACTCAGAGCTTTCTACAGCTGAAGAAGAACTTAAGCGTGTAGAGAAAGAGAAGGCTACTGTAGTGGAGAGCCTCACAATGTTAAAGGGCCAACTTACTTTGTCTATGTCTTCTCAAGAAGAGACTACAAAACAGAAGGATGCTTTGACTATTGAAGTTACAACTCTTCGAGGAGAATTGCAACAGGTAAGAGATGATCGTGACCGCCAGTTATCTCAAGTGCAAACTTTGACTACTGAATTAGCAAAATTCAAAGATTCTTCAGAGAAGTCAGGCTCTGAACTGGGGAACTTGACTATAAAAGCAAGCGAACTGGAGGRGAAATGTYCCTTGCAAGATAGCAAGATAAAGGCATTACAAGAGCAGCTAGAAACTGCAGAGAAGAAACTGCAGGTTTCTGATATATCTGCAATTGAGACAAGAATAGAATTTGAAGGCCAACAAAAACTTGTAAATGAGTTACAAAGACGCTTGGCCGATGCAGAATATAAAGTTATAGAAGGGGAGAAGCTGCGGAAATCATTACACAATACTATTTTGGAACTTAAAGGGAATATCCGCGTCTTCTGTAGAGTTCGTCCTTTGTTACCGGATGAAGGTTGTAGCACAGAAGGAAAGATTATATCTTATCCCACATCCATGGAAGCTGCCGGTCGAGGCATTGAACTTACTCAAAGTGGCCAAAAGCATTCTTTTACATTCGATAAAGTTTTCGCACCTGATGCATCACAAGAGGAAGTTTTTATTGAAATTTCGCAGCTGGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTTGCCTATGGTCAAACCGGGTCGGGAAAAACCTATACAATGATGGGCAGGCCTGGACAGCCTGAGGAAAAGGGCTTGATACCTCGCTCGCTAGAACAAATTTTCCAAACAAGACAGGCTCTGCAAGCCCAAGGCTGGAAATATGAACTTCAGGTATCAATGTTGGAAATATACAATGAAACGATTCGCGATCTGTTATCTACAAACAAGTCATCGGATGCAGCTCGAGTAGAAAATGGTACTCCTGGAAGTGGAAAGCAATATGCAATCAAACATGATGCAAACAAAAACACACATGTCTCTGATCTTACAGTGGTGGATGTTCAAAGTGTAAAAGAGGTTGCTTTTCTTTTGAACCAAGCTGCAAATAGCAGATCTGTGGGGAAAACYCAGATGAATGAACAATCTTCAAGGAGTCATTTTGTGTTCACGCTTCGAATATACGGTGTTAACGAGAGCACTGACCAACAAGTACAAGGAATCCTGAATCTTATTGATCTTGCCGGGAGCGAGCGTCTTTCAAAGAGTGGATCGACCGGCGACCGGTTGAAAGAAACTCAAGCAATCAATAAGAGTCTATCATCATTAAGTGATGTTATATTTGCCTTGGCCAAGAAGGATGACCATATTCCATTCAGGAACTCAAAGCTTACATATCTACTTCAGCCATGTCTAGGTGGAGACTCAAAGACATTGATGTTTGTGAACATATCTCCAGACCAGAGTTCAACGGGGGAGTCGCTATGCTCACTACGGTTTGCTTCAAGAGTCAACGCTTGTGAAATTGGTACACCTCGCCGACACATCAATGGAAGAACCTTTGACTCACGCTTGACCTATTGCTAA 2292 0.4119 MVGTPINGRARPAFAVVNGGNDQQHGPSSDPPSNAGSDYGVIEFTREDVEALLNEKSKRKDRFNYKERCENMADYIKRLKVCIRWFQDLEISYSLEQEKLKSSLELAQQKCMEIELLLKIKEEELNSIIVEMRRNCTSLQEKLIKEETERSAATESLVQEKEARINLERSQTALTEDLSRAQRELESSNQKISSLNEMYKRLQDYITSLQQYNGKLHSELSTAEEELKRVEKEKATVVESLTMLKGQLTLSMSSQEETTKQKDALTIEVTTLRGELQQVRDDRDRQLSQVQTLTTELAKFKDSSEKSGSELGNLTIKASELEXKCXLQDSKIKALQEQLETAEKKLQVSDISAIETRIEFEGQQKLVNELQRRLADAEYKVIEGEKLRKSLHNTILELKGNIRVFCRVRPLLPDEGCSTEGKIISYPTSMEAAGRGIELTQSGQKHSFTFDKVFAPDASQEEVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGQPEEKGLIPRSLEQIFQTRQALQAQGWKYELQVSMLEIYNETIRDLLSTNKSSDAARVENGTPGSGKQYAIKHDANKNTHVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKDDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSTGESLCSLRFASRVNACEIGTPRRHINGRTFDSRLTYC* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1406 763 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 762 - -
Amo08g1406 763 Gene3D Kinesin motor domain 343 744 IPR036961 -
Amo08g1406 763 SUPERFAMILY Tropomyosin 210 386 - -
Amo08g1406 763 Coils Coil 324 325 - -
Amo08g1406 763 MobiDBLite consensus disorder prediction 21 35 - -
Amo08g1406 763 MobiDBLite consensus disorder prediction 556 575 - -
Amo08g1406 763 Pfam Kinesin motor domain 407 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1406 763 Coils Coil 213 240 - -
Amo08g1406 763 Coils Coil 327 352 - -
Amo08g1406 763 SMART kinesin_4 399 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1406 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 740 IPR027417 -
Amo08g1406 763 Coils Coil 360 387 - -
Amo08g1406 763 CDD KISc_C_terminal 399 744 - -
Amo08g1406 763 MobiDBLite consensus disorder prediction 12 39 - -
Amo08g1406 763 ProSiteProfiles Kinesin motor domain profile. 401 742 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1406 763 Coils Coil 262 296 - -
Amo08g1406 763 PRINTS Kinesin heavy chain signature 612 629 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1406 763 PRINTS Kinesin heavy chain signature 692 713 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1406 763 PRINTS Kinesin heavy chain signature 643 661 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1406 763 PRINTS Kinesin heavy chain signature 477 498 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1406 763 PANTHER KINESIN-LIKE PROTEIN 7 762 - -
Amo08g1406 763 Coils Coil 104 205 - -
Amo08g1406 763 Coils Coil 318 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1406 Amo-Chr8 22915000 22919504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1406 314 754 Calmodulin-binding Proteins AT5G65930 36.463 1.87e-80 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1406 K10405 - gmx:100801196 1271.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1406 08 22915000 22919504 Amo13g2194 13 36793736 36801420 PCT
Amo08g1406 08 22915000 22919504 Amo03g0330 03 6173118 6181338 PCT
Amo13g2194 13 36793736 36801420 Amo08g1406 08 22915000 22919504 PCT
Amo03g0330 03 6173118 6181338 Amo08g1406 08 22915000 22919504 PCT