Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1398 ATGATGATGACCATGATGATAATGGTGGTATTTTTCTGTATTTTTGTGAAATTTTTGGATTCTTTGGGAAATTTCTGGTTGATTTTGGAAAAATATCAATACCTGGTTAAACTTGGCAGGAGTACCCAAATATACGGGTACTCGACCCGTCCATACCCGGTTGGGAAGGGCAATAACTTGAACCGAGTCAGAGTTGATTTTGCTCAGGACAAGGCATGGTCAGGATTAGGATGTTCCGGGAGAAGTCCAACTCCTCGTTCTAGTGCTGAGAAATGGTCACTTGATGAACCTGCCACCGTGCCCATTCCTATTGGCCCGGCCCATCAAGCTGAAGTTCCTGAATGGACTGGCATGGCTGTTGAGAGTGATTCAAAATGGTTTGGAAACCAAATATGGCCAGCAGCAAAGGTGAATACCAATCTTATCGAAAGGGATCCCATTGGAGCTGGAAGAAAAGATTCATGTGGCTGCCAATTTCAAGGTTCTGTTGAGTGTATCCAATTTCATGTTGCTCAGAAAAGGGCTAAACTTAAGCTAGAATTGGGTGATGCATTTTACATGTGGAATTTACACAAGACAGGGGAAGATGTTAGGCGATTGTGGACCGAACACGAAGAGAAGAAGTTTAAGGATGTGGTGAAAGCAAACCCTCTTTCACATGAGACATGTTTTTGGGAACAAATTTTCAAATCGTTTCCTACAAAGAGCAGGGAAGATTTAGTGAGTTACTACTTCAATGTCTTCCTCTTGCAGCGAAGGGGATACCAGGATCGGGATACTCCAAATGACATCAACAGCGATGATGATGAAGCAGAATATAGACCATTGAAGAATTCTTTCGGACATAACACAGATAACCCTCGCACTACCTTATTATCGCCTAAGAAGCCTAAGACAAAGGGAAGATAG 909 0.4268 MMMTMMIMVVFFCIFVKFLDSLGNFWLILEKYQYLVKLGRSTQIYGYSTRPYPVGKGNNLNRVRVDFAQDKAWSGLGCSGRSPTPRSSAEKWSLDEPATVPIPIGPAHQAEVPEWTGMAVESDSKWFGNQIWPAAKVNTNLIERDPIGAGRKDSCGCQFQGSVECIQFHVAQKRAKLKLELGDAFYMWNLHKTGEDVRRLWTEHEEKKFKDVVKANPLSHETCFWEQIFKSFPTKSREDLVSYYFNVFLLQRRGYQDRDTPNDINSDDDEAEYRPLKNSFGHNTDNPRTTLLSPKKPKTKGR* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1398 302 Gene3D - 201 264 - -
Amo08g1398 302 MobiDBLite consensus disorder prediction 259 276 - -
Amo08g1398 302 MobiDBLite consensus disorder prediction 259 302 - -
Amo08g1398 302 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 86 300 - -
Amo08g1398 302 SMART sant 197 250 IPR001005 -
Amo08g1398 302 CDD SANT 201 248 IPR001005 -
Amo08g1398 302 MobiDBLite consensus disorder prediction 279 293 - -
Amo08g1398 302 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1 86 300 - -
Amo08g1398 302 Pfam Myb-like DNA-binding domain 200 247 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1398 Amo-Chr8 22754838 22758094 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo08g1398 Myb_DNA-binding 2.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1398 - - adu:107485800 455.292