Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1387 ATGGTGTACCTCAATTTCTCTTACAGGGCTGAATCCGCAGTTTCAACCTCCAATTCTCTCACACCATCACCTTCTTCTTTTTCTTCTTCCACCGCCACCACTTCAAAAAAACAGAACAACAAAGAAAAAGAAAAACCCATCAAGATCCAACACTTCCATTACAGTGACCTTAAAGCTGCCACCAATGGCTTCTCAGAGCGCAAGCTCCTCGGCAAAGGAAGCCATGGTTATGTCTATAAAGCTGTAATGGTTTCTTCTTCTTCCTTTGCATCTGCACCAGAGTTCATCATCAGCAACAACAAGGTTGATAACGAGATTGATATCTTGTCCAAAATCCAGAGCAATAACAGCAAGCTTCCAAATTGGGGAAGAATGGTTCGTTTGGCATTGCAAACTGCAAAGAAAATTGATACCCTTCATTTATCAACACCACTTGTGATCCACAGAGATATTAAATCAACAAATGTTCTGATTGATAGAAACTTCAATGCAAGGTTAGATACAACCTCTGTCCCCACATTTCTTATTTTCCTTCTACTTCGTCCAGCCAAACCACAAGGATCTGTCTGGATTTCACTCTATTCCAGACTTGAGTACCACAGCTTCAATTCTGTGCAAATACTTGCCATTGTTGTACTCAAACTTCTTCTTCTTCTTCTTCTTCAACAACGAAGATCCGCCACCAACAGCGCTACCATAATTTAG 705 0.4085 MVYLNFSYRAESAVSTSNSLTPSPSSFSSSTATTSKKQNNKEKEKPIKIQHFHYSDLKAATNGFSERKLLGKGSHGYVYKAVMVSSSSFASAPEFIISNNKVDNEIDILSKIQSNNSKLPNWGRMVRLALQTAKKIDTLHLSTPLVIHRDIKSTNVLIDRNFNARLDTTSVPTFLIFLLLRPAKPQGSVWISLYSRLEYHSFNSVQILAIVVLKLLLLLLLQQRRSATNSATII* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1387 234 Pfam Protein tyrosine and serine/threonine kinase 34 163 IPR001245 GO:0004672|GO:0006468
Amo08g1387 234 PANTHER OS01G0750732 PROTEIN 1 114 - -
Amo08g1387 234 PANTHER OS01G0750732 PROTEIN 116 166 - -
Amo08g1387 234 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 1 114 - -
Amo08g1387 234 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 116 166 - -
Amo08g1387 234 Gene3D Phosphorylase Kinase; domain 1 25 113 - -
Amo08g1387 234 SUPERFAMILY Protein kinase-like (PK-like) 49 166 IPR011009 -
Amo08g1387 234 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g1387 234 Gene3D Transferase(Phosphotransferase) domain 1 114 167 - -
Amo08g1387 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Amo08g1387 234 Coils Coil 224 234 - -
Amo08g1387 234 MobiDBLite consensus disorder prediction 16 46 - -
Amo08g1387 234 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1387 Amo-Chr8 22657109 22658000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1387 2 166 Receptor kinase-like Gene Family AT3G59420 26.794 1.73e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Amo08g1387 PK_Tyr_Ser-Thr 1.9e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1387 - - adu:107462289 289.271