Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1383 ATGGATTGTGAGAATGATTGTTCACGGAACATCAATGTAACTGAACTTCCAACAATAACACGGTGGAATCATTCTTCAGCAAATGCTCCTCCTCGTGATCAAGAATCATCACATCCAATCTTTTCGAACAGAGGCATGGATAACAGCAAAATTTCCTCCGGCGGCTGTGGCAGATTTAATGGAGACATTTATTGTTCTTCAATAAATTCTCTTCCCGTTCATGAATCAGATCCAAGTTTCCCAAACAGAGGCACGAACAACATGGATGGATTCAATGGAGCAAGTTATGACCTTCATTCTTTTTCAGCAAATGCTCCTCTTCCTCGTCAAGAATCAGATCCAATTTTCCCAACGGGAGGCATGATGAACAGCAACATGTGTGGCGGCGGCGGATTCAACCGAGCAAGTGACCTTCTCTTGGTGGTGTCAATGTACGCAGAGCCAACAAAGTCAGAAATCATAGCCCTTGCTGAGTCCGCGATGGATGAATTGTCGAAAATAGCCCTGGAAGGGCAGCCTTTGTGGGTCCCACAGAAGGACAAGAAGTTCGAAACGCTTAACGATATCGAGTACTTGAGGCAGTTCGGTGAGGTTCAAGAAATTGAATCGATGAAGGAGATTATGAAGCTTGTTGAGGTTGGACAAGAAGAGTCTTCTTCTTCCCAGTACTTGTTGCCAACCGTTGACTCGTTTCGAAGGGAGCTTGTTCCGTTATCTCTCAGTGGAGTTCCCAAGGAAGCTCTTCAAACTGAAGCTTCACGTGATATGGGGTACCTTGAGATCAGTTCCACCAAACTGCTTCACTTGCTTATGGATGTGAATCAATGGTCCAAAGCATTCGACAATATTGTCACCAGGGCAGCGGTGCTAGGAACCTTATCAAATGGAGCGGAAGAAAGTTATGATGGGAAAGTGCAAGTGATGTTCGCGGAATATCATTTGCCTACACCATTTGTGCCATCAAGGGAGTGCTATTTTGCAAGGTACTGCAAGCAATTACCTTATGAAATGTGGGGTGTTGTTGATGTGTCCCTTGAGAAGCATTTTCCATCTCTAGCAACCAATTTCCGAAGAAGACCATCAGGCTGCTTGATTAGGCCAATGCCAGACGGATTTTCTAAGGTTATATGGGTGGAGCATGTGGAAGCAGACCATAGCCAACTGAGTAACCATTTCCGGCCACTAGTAACAACGGGTTTGGGTTTTGGTGCAACTCGTTGGATTAATTCTATAGTTAAGCACACTGAATCATCTAAAATTATGGAGGCTAAATCAGCTCCAATTTATGTGGATTATGGAGTTATAATACCACAAGCTGGAAGGACAAGTTTCCTTAACCTGGCAGACAGACTTGTGAGAACCTTTTGTGGTGATATCAATGCTTCAATGACGAATCAATGGATGCCATTAATATCTTCAGAATCTGATTCTTCAGATGTGAGGGTGATGATCAGGAATAACATTGAGGATCCTGGGAAACCTATTGCTACAACTGTGGTGTTTAGCACTTGTCTTTGGCTTAAAGTCTCACCATCACGGTTGTTCAATTTCTTGCGTCACGAGGATTCAAGAAACAAGAAATCTGAAGACAAGATTGAGATCTTTTACATTCAAGAGAGCTACATAGACACAACAGGGTCCTATATTGTTTATGCTCCACTAGACGAATTTGCTTTGTCATCTCTTGCAAATGGAGCAAACCCTAACAAGGTAATGGTCCTTCCATCAGGATTTTCTATCCTTCCTTGTGGGTTCCCTAGTGATTATATTGATGAAAAGGGTGAAGGTGGAAGCATTTTAACTATTGCGTTTCATACAATTGAGAGTCACAACATTAAACAATTTTTTTCTCTTGAATCAGTTATTGTCATGAAAAATATTATTTCAGACACTGTCACCAGTATAAAAGATGCCGTGTTGTATAATAATTACACTAACAATTGGCAGTATAATTGA 1956 0.4197 MDCENDCSRNINVTELPTITRWNHSSANAPPRDQESSHPIFSNRGMDNSKISSGGCGRFNGDIYCSSINSLPVHESDPSFPNRGTNNMDGFNGASYDLHSFSANAPLPRQESDPIFPTGGMMNSNMCGGGGFNRASDLLLVVSMYAEPTKSEIIALAESAMDELSKIALEGQPLWVPQKDKKFETLNDIEYLRQFGEVQEIESMKEIMKLVEVGQEESSSSQYLLPTVDSFRRELVPLSLSGVPKEALQTEASRDMGYLEISSTKLLHLLMDVNQWSKAFDNIVTRAAVLGTLSNGAEESYDGKVQVMFAEYHLPTPFVPSRECYFARYCKQLPYEMWGVVDVSLEKHFPSLATNFRRRPSGCLIRPMPDGFSKVIWVEHVEADHSQLSNHFRPLVTTGLGFGATRWINSIVKHTESSKIMEAKSAPIYVDYGVIIPQAGRTSFLNLADRLVRTFCGDINASMTNQWMPLISSESDSSDVRVMIRNNIEDPGKPIATTVVFSTCLWLKVSPSRLFNFLRHEDSRNKKSEDKIEIFYIQESYIDTTGSYIVYAPLDEFALSSLANGANPNKVMVLPSGFSILPCGFPSDYIDEKGEGGSILTIAFHTIESHNIKQFFSLESVIVMKNIISDTVTSIKDAVLYNNYTNNWQYN* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1383 651 Gene3D - 245 413 IPR023393 -
Amo08g1383 651 SUPERFAMILY Bet v1-like 252 416 - -
Amo08g1383 651 CDD START_ArGLABRA2_like 150 416 - -
Amo08g1383 651 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 133 526 - -
Amo08g1383 651 Pfam START domain 240 416 IPR002913 GO:0008289
Amo08g1383 651 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 533 641 IPR042160 -
Amo08g1383 651 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN ROC2 533 641 - -
Amo08g1383 651 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 133 526 IPR042160 -
Amo08g1383 651 ProSiteProfiles START domain profile. 146 420 IPR002913 GO:0008289
Amo08g1383 651 MobiDBLite consensus disorder prediction 22 47 - -
Amo08g1383 651 SMART START_1 198 417 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1383 Amo-Chr8 22588116 22592314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1383 137 639 Homeobox Transcription Factor Family AT4G04890 35.766 3.02e-104 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1383 K09338 - jre:108992281 449.129