Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1376 ATGGAAGATATACTTGGTCTTATCAAACTTAGGATTAAAAGAGGCATTAATCTCGCAAAACGCGATACTTTTTCTAGTGACCCTTATGTTGTTGTCAAAATGGAAGAACAGAAGTTGAAAACTGCGTTCATACGCAAAAATATCAATCCAGAATGGAATGAAGAATTGACTCTTTATGTTAAGGATGTTGCAACTCCAATAACTGTGCAAGTTTATGACAAAGACACATTCACTGCAGACGATGAAATGGGAGATGCATTTATAGACTTAAGGCCGTATATTGGGTGCTATTATTTGATGGGGTTAGAGAGATTGCCAGATGGATGTGTGGTAAAGAAAATTCAACCAAATAAGACTAACTGTCTTGCTGAAGAGAGCACATGCTTTTGGCGCAATGGCTGTATAGTCCAAAATATGATACTAAGATTGAAAAATGTTGAGTGCGGCGAAATAGAGTGTGAGATTGAGTGGCGTGATATTCCTGGTTGTAAAGGTTTATCTGGACTAAGATCTTGA 516 0.374 MEDILGLIKLRIKRGINLAKRDTFSSDPYVVVKMEEQKLKTAFIRKNINPEWNEELTLYVKDVATPITVQVYDKDTFTADDEMGDAFIDLRPYIGCYYLMGLERLPDGCVVKKIQPNKTNCLAEESTCFWRNGCIVQNMILRLKNVECGEIECEIEWRDIPGCKGLSGLRS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1376 171 Pfam C2 domain 7 92 IPR000008 -
Amo08g1376 171 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Amo08g1376 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Amo08g1376 171 PRINTS C2 domain signature 22 34 IPR000008 -
Amo08g1376 171 PRINTS C2 domain signature 46 59 IPR000008 -
Amo08g1376 171 PRINTS C2 domain signature 67 75 IPR000008 -
Amo08g1376 171 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Amo08g1376 171 Gene3D C2 domain 4 162 IPR035892 -
Amo08g1376 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 164 - -
Amo08g1376 171 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1376 Amo-Chr8 22540164 22540874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1376 38 167 C2H2 Transcription Factor Family AT1G70790 58.015 2.03e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1376 - - zju:107429323 238.039