Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1363 ATGTATAAGCGGTTACAAGATTACATAACAAGCTTACAGCAGTACAATGGAAAGCTTCACTCAGAGCTTTCTACAGCTGAAGAAGAACTTAAGCGTGTAGAGAAAGAGAAGGCTACTGTAGTGGAGAGCCTCACAATGTTAAAGGGCCAACTTACTTTGTCTATGTCTTCTCAAGAAGAGACTACAAAACAGAAGGATGCTTTGACTATTGAAGTTACAACTCTTCGAGGAGAATTGCAACAGGTAAGAGACGATCGTGACCGCCAGTTATCTCAAGTGCAAACTTTGACTACTGAATTAGCAAAATTCAAAGATTCTTCAGAGAAGTCAGGCTCTGAACTGGGGAACTTGACTATAAAAGCAAGTGAACTGGAGGCGAAATGTGCCTTGCAAGATAGCAAGATAAAGGCATTACAAGAGCAGCTAGAAACTGCAGAGAAGAAACTGCAGGTTTCTGATATATCTGCAATTGAGACAAGAATAGAATTTGAAGGCCAACAAAAACTTGTAAATGAGTTACAAAGACGCTTGGCCGATGCAGAATATAAAGTTATAGAAGGGGAGAAGCTGCGGAAATCGTTACACAATACTATTTTGGAACTTAAAGGGAATATCCGCGTCTTCTGTAGAGTTCGTCCTTTGTTACCGGATGAAGGTTGTAGCACAGAAGGAAAGATTATATCTTATCCCACATCCATGGAAGCTGCTGGTCGAGGCATTGAACTTACTCAAAGTGGCCAAAAGCATTCTTTTACATTCGATAGAGTTTTCGCACCTGATGCATCACAAGAGGAAGTTTTTATTGAAATTTCACAGCTGGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTTGCCTATGGTCAAACCGGGTCGGGAAAAACCTATACAATGATGGGCAGGCCTGGACAGCCTGAGGAAAAGGGCTTGATACCTCGCTCGCTAGAACAAATTTTCCAAACAAGACAGGCTCTGCAAGCCCAAGGCTGGAAATATGAACTTCAGGTATCAATGTTGGAAATATACAATGAAACGATTCGCGATCTGTTATCTACAAACAAGTCATCGGATGCAGCTCGAGTAGAAAATGGTACTCCTGGAAGTGGAAAGCAATATGCAATCAAACATGATGCAAACAAAAACACACATGTCTCTGATCTTACAGTGGTGGATGTTCAAAGTGTAAAAGAGGTTGCTTTTCTTTTGAACCAAGCTGCAAATAGCAGATCTGTGGGGAAAACACAGATGAATGAACAATCTTCAAGGAGTCATTTTGTGTTCACGCTTCGAATATACGGTGTTAACGAGAGCACTGACCAACAAGTACAAGGAATCCTGAATCTTATTGATCTTGCCGGGAGCGAGCGTCTTTCAAAGAGTGGATCGACCGGGGACCGATTGAAAGAAACTCAAGCAATCAATAAAAGTCTATCATCATTAAGTGATGTTATATTTGCCTTGGCCAAGAAGGATGACCATATTCCATTCAGGAACTCAAAGCTTACATATCTACTTCAGCCATGCCTAGGTGGAGACTCAAAGACATTGATGTTTGTGAACATATCTCCAGAGCAGAGTTCAATGGGGGAGTCGCTATGCTCACTACGGTTTGCTTCAAGAGTCAACGCTTGTGAAATTGGTACACCTCGCCGACACATCAATGGAAGAACCTTTGACTCACGCTTGACCTATTGCTAA 1701 0.4162 MYKRLQDYITSLQQYNGKLHSELSTAEEELKRVEKEKATVVESLTMLKGQLTLSMSSQEETTKQKDALTIEVTTLRGELQQVRDDRDRQLSQVQTLTTELAKFKDSSEKSGSELGNLTIKASELEAKCALQDSKIKALQEQLETAEKKLQVSDISAIETRIEFEGQQKLVNELQRRLADAEYKVIEGEKLRKSLHNTILELKGNIRVFCRVRPLLPDEGCSTEGKIISYPTSMEAAGRGIELTQSGQKHSFTFDRVFAPDASQEEVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGQPEEKGLIPRSLEQIFQTRQALQAQGWKYELQVSMLEIYNETIRDLLSTNKSSDAARVENGTPGSGKQYAIKHDANKNTHVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKDDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPEQSSMGESLCSLRFASRVNACEIGTPRRHINGRTFDSRLTYC* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1363 566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 543 IPR027417 -
Amo08g1363 566 PRINTS Kinesin heavy chain signature 415 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1363 566 PRINTS Kinesin heavy chain signature 495 516 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1363 566 PRINTS Kinesin heavy chain signature 446 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1363 566 PRINTS Kinesin heavy chain signature 280 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1363 566 Gene3D Kinesin motor domain 145 547 IPR036961 -
Amo08g1363 566 Coils Coil 16 43 - -
Amo08g1363 566 Pfam Kinesin motor domain 210 543 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1363 566 Coils Coil 121 155 - -
Amo08g1363 566 ProSiteProfiles Kinesin motor domain profile. 204 545 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1363 566 PANTHER KINESIN-LIKE PROTEIN 1 565 - -
Amo08g1363 566 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 565 - -
Amo08g1363 566 Coils Coil 163 190 - -
Amo08g1363 566 CDD KISc_C_terminal 202 547 - -
Amo08g1363 566 SMART kinesin_4 202 553 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo08g1363 566 Coils Coil 65 99 - -
Amo08g1363 566 SUPERFAMILY Tropomyosin 13 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1363 Amo-Chr8 22204407 22207873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1363 117 557 Calmodulin-binding Proteins AT5G65930 36.681 7.53e-84 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1363 K10405 - gmx:100801196 961.059